mRNA_L-elsbetiae_contig964.18619.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: D8LKT1_ECTSI (Dual specificity protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT1_ECTSI) HSP 1 Score: 244 bits (624), Expect = 3.400e-78 Identity = 125/170 (73.53%), Postives = 135/170 (79.41%), Query Frame = 1 Query: 13 MTSLADQD-EILGVGRGSGVDGGGGVDSEGQVAAAVNQTGSTVPEHVVYNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTSKGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSRVAAGPPPGAVIHPSLL 519 M LAD + GVG S D GV + A A+NQ E VVYNCRMCRRAVF+ DI++HE AQHNF RRKSKGVTSKG CSSIFL+EPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSW+TPAIQFPRKNLDAR RV+ GPPPG V+HPSLL Sbjct: 1 MAMLADDVVDTAGVGS-SNFDASPGV-AAAAAAVALNQPAED-QEDVVYNCRMCRRAVFNGADIEKHEAAQHNFRRRKSKGVTSKGPCSSIFLSEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWITPAIQFPRKNLDARPRVSTGPPPGTVVHPSLL 167
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A7S1XM93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM93_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.050e-28 Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 154 YNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTS-KGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSRVAAGPPP 492 Y CR+CRR +F A D++ H Q RR GV++ K CSS+FLAEP W +EG++ CPN+ C +R+GSL W+GAQCSCG+W+TPA Q +DA++R PPP Sbjct: 10 YTCRLCRRELFVADDLEAHAAGQQQLWRR---GVSAAKQHCSSLFLAEPPEWSTL----VEGRIDCPNERCRSRIGSLSWSGAQCSCGTWITPAFQIVLSKVDAKARRRRAPPP 116
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A024UKQ3_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKQ3_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.120e-26 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 154 YNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTSKGL--CSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSRVA 477 Y CRMCR +F++ D+ HE +H +RK G CSS FL++ K WM +A EGKL CP C +RLGS W+G+QCSCG+WVTP++QF + +D + ++A Sbjct: 45 YVCRMCRALLFTSDDLMEHEPQRHQISQRKKLKEAKLGAVECSSYFLSDTKEWM-DEASLAEGKLFCPVAKCNSRLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVKVKMA 153
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: W4G7N2_9STRA (C2H2-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7N2_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.550e-25 Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 148 VVYNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTSKGL--CSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSRV 474 V + CRMCR +F++ D+ +HE +H +RK + G CSS FL + K WM +A EGKL CP C ARLGS W+G+QCSCG+WVTP++QF + +D + ++ Sbjct: 9 VEFVCRMCRVLLFTSDDLLQHEPQKHQISQRKKLKESKLGAVDCSSFFLVDTKEWM-DEASLAEGKLLCPVAKCNARLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVKLKM 118
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A485L5N9_9STRA (Aste57867_16448 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N9_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.320e-25 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 148 VVYNCRMCRRAVFSAGDIQRHEVAQHNFHRRKS--KGVTSKGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSRV 474 V Y CRMCR +F++ D+ H QH RK +G CSS FLA+ K WM + A +GK+ CP C +RLGS W+G+QCSCG+W+TP+IQF + +D + ++ Sbjct: 8 VEYVCRMCRHHLFTSDDLMEHAPQQHQISMRKKIKEGKLGAPECSSYFLADTKDWMDENA-VADGKIFCPVAKCNSRLGSFNWSGSQCSCGTWITPSIQFTKSRVDVKLKM 117
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A7S1TTA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTA1_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.210e-25 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 154 YNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTS-KGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQF 441 Y CR+CRR +F A D++ H Q RR GV++ K CSS+FLAEP W +EG++ CPN+ C +R+GSL W+GAQCSCG+W+TPA Q Sbjct: 10 YTCRLCRRELFVADDLEAHAAGQQQLWRR---GVSAAKQHCSSLFLAEPPEWSTL----VEGRIDCPNERCRSRIGSLSWSGAQCSCGTWITPAFQI 99
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A6U2PMU6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PMU6_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.300e-24 Identity = 55/145 (37.93%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 94 EGQVAAAVNQTGSTVPEHVVYNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTSKGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSRVA---AGPPPGAVIHPSLL 519 EG+ + + T PE + + CR CR +F D H + H+F RRKS T CSS+FL+ WM + EG+L CP CG+++G W G QCSCGSW+TPAI FP +D + + AV+H S+L Sbjct: 19 EGENEKVLLPSVDTDPEKIRFACRKCRFILFGEDDTTTHIKSNHSFSRRKSGSNTDAKKCSSVFLSSGLDWMGDMSA-FEGRLDCPK--CGSKVGQWNWGGTQCSCGSWITPAIYFPMSKVDLKRPIQIDRTSTEDAAVMHQSVL 160
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: K0S374_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S374_THAOC) HSP 1 Score: 103 bits (258), Expect = 9.920e-24 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 85 VDSEGQVAAAVNQTGSTVP--EHVVYNCRMCRRAVFSAGDIQR--HEVAQHNFHRRKSKGVTSKGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDARSR 471 +D++ + A + G VP + Y+CR CR +F D++ H +QH+F ++ + + LC S FLA+P WM G+MEGKL CP C ++G WTGAQCSCG+WV PA+ P+ +D R Sbjct: 34 LDTDVALGAVTDSPGPHVPNPQKTRYSCRKCRTVLFGVADLEDPPHTQSQHSFRKKGASHNITSSLCQSHFLAQPLSWMGG-CGDMEGKLHCPK--CLYKVGHYSWTGAQCSCGTWVVPALMIPKSKVDEMKR 163
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A7S2Y1A4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1A4_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.040e-23 Identity = 45/103 (43.69%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 154 YNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTSKGLCSSIFLAEPKRWMKQQAGEMEGKLSCPNKACGARLGSLKWTGAQCSCGSWVTPAIQFPRKNLDA 462 + CR CR +F D++ H H F + K K + C S FL E WM +EGKL CPN C RLG W G+QCSCGSWV PA+Q P +DA Sbjct: 7 FTCRRCRTVLFQESDLEGHVPQTHKFRKAKIKSGPVQMACGSYFLKESLEWMGPM-DHLEGKLFCPNPRCKTRLGHYNWAGSQCSCGSWVAPALQVPMSKVDA 108
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Match: A0A6H5L2R0_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R0_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.660e-22 Identity = 56/100 (56.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 13 MTSLADQD--EILGVGRGSGVDGGGGVDSEGQVAAAVNQTGSTVPEHVVYNCRMCRRAVFSAGDIQRHEVAQHNFHRRKSKGVTSKGLCSSIFLAEPKRW 306 M LAD D + GVG S D GV AAV + + VVYNCRMCRRAVF+ DI+ HE AQHNF RRKSK T KG CSSIFL+EPKRW Sbjct: 1 MAMLADDDVDDTAGVGS-SNFDASSGV----AATAAVPLKQTAEDQDVVYNCRMCRRAVFNGADIENHEAAQHNFRRRKSKSATPKGPCSSIFLSEPKRW 95 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig964.18619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig964.18619.1 >prot_L-elsbetiae_contig964.18619.1 ID=prot_L-elsbetiae_contig964.18619.1|Name=mRNA_L-elsbetiae_contig964.18619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp MTSLADQDEILGVGRGSGVDGGGGVDSEGQVAAAVNQTGSTVPEHVVYNCback to top mRNA from alignment at L-elsbetiae_contig964:19535..22253+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig964.18619.1 ID=mRNA_L-elsbetiae_contig964.18619.1|Name=mRNA_L-elsbetiae_contig964.18619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2719bp|location=Sequence derived from alignment at L-elsbetiae_contig964:19535..22253+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig964:19535..22253+ >mRNA_L-elsbetiae_contig964.18619.1 ID=mRNA_L-elsbetiae_contig964.18619.1|Name=mRNA_L-elsbetiae_contig964.18619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig964:19535..22253+ (Laminarionema elsbetiae ELsaHSoW15)back to top |