mRNA_L-elsbetiae_contig964.18618.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 505 bits (1300), Expect = 2.020e-171 Identity = 310/469 (66.10%), Postives = 348/469 (74.20%), Query Frame = 1 Query: 1 MLCSQRPEERALGDVMIPEDVSGAAGEGSGG-GIGISAEPPGFLKRLFSVPKNVRRTAAAGDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPT-------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQ---------SGGGAGGS--------GLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGA--FVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR 1326 ML +RPEERALGDV+IPED G AGEG G IG+S EPPGFLKR+FS+PKNVRRTAAAGDVVVPVIGARDGWGGIRQ +N+GIYPGVEYRILE+S+FPT PT + XXXXXXXXXXXXXXXXXX + DLDAEPT+ LASAR+AP SF+DG+LVFTMRPIYPLV RLER DWPV VPAREFPVMLTPFSYNAATAWAA TTSLSLL+VGFV SQALT SVINSHSMEPTLQVGDVVLVEKVSR+ +V+ +DI++F PPPVL+++VS AGG L+PSDLFVKRVA L GDTVTV ADG+VDVR A GG + + +GG A G G+ +EGSA + G + K LPDSVLQRITR+D+KVL FVLGDNPAASMDSRVWGQLD+GEIVGHALLRV PPRSFGLL+ Sbjct: 86 MLFEKRPEERALGDVLIPEDAPGGAGEGGGDDAIGVSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQA-SNQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVR----AAAGGGITRLPKGTNRADNGGSAAGGESDVILGDGVAGQEGSAAAVAAA------------------KGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLLQ 531
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.570e-43 Identity = 149/287 (51.92%), Postives = 170/287 (59.23%), Query Frame = 1 Query: 445 SPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRDDIMFFTPPPVLREVVSSAGGA-LNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLP 1302 +PL S +AP +FE G L+ +RPIYPL+ RLER WPV V AR+ P+ LT F+YN ATAWAAL LT S I S SMEP L+ GDVVLVEKVSR +++RR +++FF PPP LR V+ AGGA L DLFVKRVA L GD V V DG VR R G LP+ A S L RE + XXXXXXXXXXXXXXXXXXXXXXXX G+A FVLGDNP S+DSRVWG L IVG LLRV P Sbjct: 18 APLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLER-AWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGD-LPR----AARSRLLLRE-AXXXXXXXXXXXXXXXXXXXXXXXXXXAGSA--------------------------FVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFP 271
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC) HSP 1 Score: 148 bits (374), Expect = 8.060e-36 Identity = 119/287 (41.46%), Postives = 144/287 (50.17%), Query Frame = 1 Query: 502 VFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVR---RDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVG-----ADGTVDVRPPPSR--ATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVL-DGA-FVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR 1326 V T+RP Y LV +LER WPV + E P+ LTP YN AT + L ++ LLAV VASQ + I S+SMEPTL GDV+LVEKVSR +VR DI+ F PP LR V AGG L P DLFVKRVA GD VTV +G V P P G P + +GS RG A P P + D+ VL GA +VLGDNP S+DSR+WG+L E EIVGH ++R+ P FG +R Sbjct: 160 VITVRPRYRLVDKLER-QWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSR--LVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVDNGLPTINGHTYVYPEPEEPPTIGSDAPPA----------RADGSMQRLAIG-------------------RGFAWPYAGEAPSQWV-----ADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFGPVR 409
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.550e-32 Identity = 122/385 (31.69%), Postives = 171/385 (44.42%), Query Frame = 1 Query: 178 GDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRD---DIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQ--RITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFG 1317 G VVVPV+ R ++ +G YPGVEYRIL + LD + S P +E ++P+YPLV +LER WPV V R+ P + TP YN +A+ +L T+ S L V F+ SQA++ I S SM+PTL+VGDV+LV+KVS + R++ D++ F+PP L+E+V+ GG L+ DLFVKR+A PGD VTV DG VDV +G + G RR L + ++ +DQK + FV+GD + S+DSRVWG L+ IVG ++R+ P FG Sbjct: 345 GKVVVPVLSRLSQ----RPKMFEQGAYPGVEYRILRI----------------------------------------------LDRDGRERFTSC---PGADYE-------LKPVYPLVAQLER-PWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDV---------------------NGQDVVAG--------------------------RRDLCEAEPLRLIEKYIEPREDKIIDQKEV---FVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFG 618
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN) HSP 1 Score: 136 bits (343), Expect = 3.300e-32 Identity = 119/392 (30.36%), Postives = 168/392 (42.86%), Query Frame = 1 Query: 148 PKNVRRTAAAGDVVVPVI----GARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRA-SIVRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVG-ADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPP 1305 P++ R G V VP G+R G R R+ G+YPG+EYR++ + D+D + T PEG+ G + ++RPIYPL +RLER WPV+V + + P LT YN+ T S+S++ A +A++F I S SMEPT+ GD++L EK+S +R +I+ FTPP L+ VV S GG + P DLF+KRVA LPGD VTV ADG+V V + G + GGA +G P K + V +FVLGD S+DSRVWG L + ++ L+++ PP Sbjct: 39 PRDTRGELRVGQVFVPTTLAGGGSRPGLLQNRDRMFAVGVYPGIEYRLMGMR--------------------------------------------DIDTKET-----LFRVPEGA---GEVEMSVRPIYPLDKRLER-PWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGERVQRQGPTCDEPSGGA-------------------------------------QGLVRPQKGKVKSGV--------------SFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWPP 326
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 126 bits (317), Expect = 2.370e-29 Identity = 97/274 (35.40%), Postives = 129/274 (47.08%), Query Frame = 1 Query: 505 FTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRD---DIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFG 1317 + ++PIYPLV +LER WPV V E P + T YN +A +L T+ L V + SQ ++ I S SM+PTL VGDVV+VEKVS + D++ F PP L+E+V S+GG + DLFVKRVA P VTVG+DG V + +E +E +R S L + ++ T Q D FV+GD + S+DSRVWG L EI+G L RV P FG Sbjct: 20 YDLKPIYPLVDQLER-PWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDE---------------------MELQE---------------------------KRDMCSEEPLGLIERYIEPGTTEVQS--DEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFG 242
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S4KZX7_GUITH (Mitochondrial inner membrane protease subunit (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZX7_GUITH) HSP 1 Score: 119 bits (299), Expect = 5.920e-25 Identity = 92/278 (33.09%), Postives = 133/278 (47.84%), Query Frame = 1 Query: 121 GFLKR---LFSVPKNVRRTAAAGDVVVPVIG-ARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVS-RASI-VRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTV 936 GF +R + P++VR++ G V VP +G R W R L +G+YPG+EYRI+ + DAE + + SA + + +RPIY + + L+R WPV V E PV +T YN AT SL LL G +A +A++ I S SMEPT+ GD+++VEK++ R + ++R++I+ F+PP L +V S GG L DLFVKRVAGLP ++ V DG V Sbjct: 274 GFRRRNGIFWEWPEDVRKSLRCGQVFVPSLGIGRADWRRRRDELFLKGVYPGLEYRIMGME----------------------------------------------DAEDGTMIFSASSSKNP-------ILKVRPIYAVRKDLDR-SWPVRVSMGEIPVAVTQAMYNTATLIIVTMASLGLLMSGLIAREAISLYKIPSRSMEPTIMAGDLLVVEKMTARLGVPLKRNEIILFSPPEELERIVRSNGGRLRGGDLFVKRVAGLPHESFKVSGDGRV 497
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO) HSP 1 Score: 113 bits (282), Expect = 5.700e-23 Identity = 115/399 (28.82%), Postives = 169/399 (42.36%), Query Frame = 1 Query: 178 GDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVS-----RASIVRRDD----IMFFTPPPVLREVVSSAGGA-LNPSDLFVKRVAGLPGDTVTV-GADGTVDV--RPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDG---AFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR 1326 G +VVP++ + R + +G YPGVEYRIL + +D E + L +R + + ++PIYPLV++LER WPV V R+ P + TP YN +A +L T+++ L F+ SQA++ VI S SMEPTLQVGDV+LV+KV+ + ++ + +D I+ F P L+++V +GG L +LFVKRVA PG T+ + A G V++ R P LE R+ P ++++ R + G VLGD + S+DSRVWG L IVG LLRV P G ++ Sbjct: 214 GRIVVPILRSL----AERPAMFRQGTYPGVEYRILRI----------------------------------------------IDPETGADLFYSRPGVD---------YELKPIYPLVQQLER-LWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRKP--------------------LERRDFCGEE----------------------------------PTRLIEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQIQ 498
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO) HSP 1 Score: 107 bits (266), Expect = 1.670e-21 Identity = 93/287 (32.40%), Postives = 135/287 (47.04%), Query Frame = 1 Query: 505 FTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVS-----RASIVRRDD----IMFFTPPPVLREVVSSAGGA-LNPSDLFVKRVAGLPGDTVTV-GADGTVDV--RPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDG---AFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFG 1317 + ++PIYPLV++LER WPV V ++ P + TP YN +A +L T++ L F+ SQA++ VI S SMEPTLQVGDV+LV+K++ + ++ + + I+ F P L+++V +GG L +LFVKRVA PG T+ + A G V++ R P LE R+ P ++++ R + G VLGD + S+DSRVWG L IVG LLRV P G Sbjct: 132 YELKPIYPLVQQLER-LWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRKP--------------------LERRDFCGEE----------------------------------PTRLIEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 363
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S1BHK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHK1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.740e-19 Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 484 FEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRR---DDIMFFTPPPVLREVVSSAGGAL 858 F+ + + ++P+YPLV +ER WPV + +E ++TP YN TA+ A++T++S L F+ S A++ I S SM+PTL+VGDV+LVEK+S + R D++ F PPP LR++V+ GG L Sbjct: 104 FDQPGVDYEVKPVYPLVASMER-QWPVRIAEKELTKIITPLQYNILTAFGAVSTAVSTLVTFFLISLAVSLFFIPSKSMDPTLRVGDVLLVEKISPRLPLHRYAVGDVVMFRPPPALRDIVARNGGRL 230 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig964.18618.1 >prot_L-elsbetiae_contig964.18618.1 ID=prot_L-elsbetiae_contig964.18618.1|Name=mRNA_L-elsbetiae_contig964.18618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=443bp MLCSQRPEERALGDVMIPEDVSGAAGEGSGGGIGISAEPPGFLKRLFSVPback to top mRNA from alignment at L-elsbetiae_contig964:3241..6165+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig964.18618.1 ID=mRNA_L-elsbetiae_contig964.18618.1|Name=mRNA_L-elsbetiae_contig964.18618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2925bp|location=Sequence derived from alignment at L-elsbetiae_contig964:3241..6165+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig964:3241..6165+ >mRNA_L-elsbetiae_contig964.18618.1 ID=mRNA_L-elsbetiae_contig964.18618.1|Name=mRNA_L-elsbetiae_contig964.18618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2658bp|location=Sequence derived from alignment at L-elsbetiae_contig964:3241..6165+ (Laminarionema elsbetiae ELsaHSoW15)back to top |