mRNA_L-elsbetiae_contig964.18618.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig964.18618.1
Unique NamemRNA_L-elsbetiae_contig964.18618.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE)

HSP 1 Score: 505 bits (1300), Expect = 2.020e-171
Identity = 310/469 (66.10%), Postives = 348/469 (74.20%), Query Frame = 1
Query:    1 MLCSQRPEERALGDVMIPEDVSGAAGEGSGG-GIGISAEPPGFLKRLFSVPKNVRRTAAAGDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPT-------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQ---------SGGGAGGS--------GLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGA--FVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR 1326
            ML  +RPEERALGDV+IPED  G AGEG G   IG+S EPPGFLKR+FS+PKNVRRTAAAGDVVVPVIGARDGWGGIRQ  +N+GIYPGVEYRILE+S+FPT    PT       +            XXXXXXXXXXXXXXXXXX + DLDAEPT+ LASAR+AP  SF+DG+LVFTMRPIYPLV RLER DWPV VPAREFPVMLTPFSYNAATAWAA TTSLSLL+VGFV SQALT SVINSHSMEPTLQVGDVVLVEKVSR+ +V+ +DI++F PPPVL+++VS AGG L+PSDLFVKRVA L GDTVTV ADG+VDVR     A GG + +         +GG A G         G+  +EGSA                        + G  +  K  LPDSVLQRITR+D+KVL     FVLGDNPAASMDSRVWGQLD+GEIVGHALLRV PPRSFGLL+
Sbjct:   86 MLFEKRPEERALGDVLIPEDAPGGAGEGGGDDAIGVSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQA-SNQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVR----AAAGGGITRLPKGTNRADNGGSAAGGESDVILGDGVAGQEGSAAAVAAA------------------KGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLLQ 531          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.570e-43
Identity = 149/287 (51.92%), Postives = 170/287 (59.23%), Query Frame = 1
Query:  445 SPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRDDIMFFTPPPVLREVVSSAGGA-LNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLP 1302
            +PL S  +AP  +FE G L+  +RPIYPL+ RLER  WPV V AR+ P+ LT F+YN ATAWAAL                LT S I S SMEP L+ GDVVLVEKVSR +++RR +++FF PPP LR  V+ AGGA L   DLFVKRVA L GD V V  DG   VR    R  G  LP+    A  S L  RE + XXXXXXXXXXXXXXXXXXXXXXXX  G+A                          FVLGDNP  S+DSRVWG L    IVG  LLRV P
Sbjct:   18 APLDSVADAPPNAFEAGDLLLQLRPIYPLIPRLER-AWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGALVRGAGD-LPR----AARSRLLLRE-AXXXXXXXXXXXXXXXXXXXXXXXXXXAGSA--------------------------FVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFP 271          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 148 bits (374), Expect = 8.060e-36
Identity = 119/287 (41.46%), Postives = 144/287 (50.17%), Query Frame = 1
Query:  502 VFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVR---RDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVG-----ADGTVDVRPPPSR--ATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVL-DGA-FVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR 1326
            V T+RP Y LV +LER  WPV +   E P+ LTP  YN AT  + L ++  LLAV  VASQ  +   I S+SMEPTL  GDV+LVEKVSR  +VR     DI+ F PP  LR  V  AGG L P DLFVKRVA   GD VTV       +G   V P P      G   P +            +GS                          RG A P     P   +      D+ VL  GA +VLGDNP  S+DSR+WG+L E EIVGH ++R+ P   FG +R
Sbjct:  160 VITVRPRYRLVDKLER-QWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSR--LVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVDNGLPTINGHTYVYPEPEEPPTIGSDAPPA----------RADGSMQRLAIG-------------------RGFAWPYAGEAPSQWV-----ADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFGPVR 409          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.550e-32
Identity = 122/385 (31.69%), Postives = 171/385 (44.42%), Query Frame = 1
Query:  178 GDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRD---DIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQ--RITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFG 1317
            G VVVPV+         R ++  +G YPGVEYRIL +                                              LD +      S    P   +E       ++P+YPLV +LER  WPV V  R+ P + TP  YN  +A+ +L T+ S L V F+ SQA++   I S SM+PTL+VGDV+LV+KVS  +  R++   D++ F+PP  L+E+V+  GG L+  DLFVKR+A  PGD VTV  DG VDV                     +G +   G                          RR         L +  ++      +DQK +   FV+GD  + S+DSRVWG L+   IVG  ++R+ P   FG
Sbjct:  345 GKVVVPVLSRLSQ----RPKMFEQGAYPGVEYRILRI----------------------------------------------LDRDGRERFTSC---PGADYE-------LKPVYPLVAQLER-PWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDV---------------------NGQDVVAG--------------------------RRDLCEAEPLRLIEKYIEPREDKIIDQKEV---FVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFG 618          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN)

HSP 1 Score: 136 bits (343), Expect = 3.300e-32
Identity = 119/392 (30.36%), Postives = 168/392 (42.86%), Query Frame = 1
Query:  148 PKNVRRTAAAGDVVVPVI----GARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRA-SIVRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVG-ADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPP 1305
            P++ R     G V VP      G+R G    R R+   G+YPG+EYR++ +                                             D+D + T         PEG+   G +  ++RPIYPL +RLER  WPV+V + + P  LT   YN+ T       S+S++     A +A++F  I S SMEPT+  GD++L EK+S      +R +I+ FTPP  L+ VV S GG + P DLF+KRVA LPGD VTV  ADG+V V     +  G    +  GGA                                     +G   P K  +   V              +FVLGD    S+DSRVWG L + ++    L+++ PP
Sbjct:   39 PRDTRGELRVGQVFVPTTLAGGGSRPGLLQNRDRMFAVGVYPGIEYRLMGMR--------------------------------------------DIDTKET-----LFRVPEGA---GEVEMSVRPIYPLDKRLER-PWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGERVQRQGPTCDEPSGGA-------------------------------------QGLVRPQKGKVKSGV--------------SFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWPP 326          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE)

HSP 1 Score: 126 bits (317), Expect = 2.370e-29
Identity = 97/274 (35.40%), Postives = 129/274 (47.08%), Query Frame = 1
Query:  505 FTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRRD---DIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDGAFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFG 1317
            + ++PIYPLV +LER  WPV V   E P + T   YN  +A  +L T+   L V +  SQ ++   I S SM+PTL VGDVV+VEKVS       +   D++ F PP  L+E+V S+GG +   DLFVKRVA  P   VTVG+DG V +                       +E +E                           +R   S     L +  ++  T   Q   D  FV+GD  + S+DSRVWG L   EI+G  L RV P   FG
Sbjct:   20 YDLKPIYPLVDQLER-PWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDE---------------------MELQE---------------------------KRDMCSEEPLGLIERYIEPGTTEVQS--DEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFG 242          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S4KZX7_GUITH (Mitochondrial inner membrane protease subunit (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZX7_GUITH)

HSP 1 Score: 119 bits (299), Expect = 5.920e-25
Identity = 92/278 (33.09%), Postives = 133/278 (47.84%), Query Frame = 1
Query:  121 GFLKR---LFSVPKNVRRTAAAGDVVVPVIG-ARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVS-RASI-VRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLPGDTVTVGADGTV 936
            GF +R    +  P++VR++   G V VP +G  R  W   R  L  +G+YPG+EYRI+ +                                               DAE  + + SA  +          +  +RPIY + + L+R  WPV V   E PV +T   YN AT       SL LL  G +A +A++   I S SMEPT+  GD+++VEK++ R  + ++R++I+ F+PP  L  +V S GG L   DLFVKRVAGLP ++  V  DG V
Sbjct:  274 GFRRRNGIFWEWPEDVRKSLRCGQVFVPSLGIGRADWRRRRDELFLKGVYPGLEYRIMGME----------------------------------------------DAEDGTMIFSASSSKNP-------ILKVRPIYAVRKDLDR-SWPVRVSMGEIPVAVTQAMYNTATLIIVTMASLGLLMSGLIAREAISLYKIPSRSMEPTIMAGDLLVVEKMTARLGVPLKRNEIILFSPPEELERIVRSNGGRLRGGDLFVKRVAGLPHESFKVSGDGRV 497          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO)

HSP 1 Score: 113 bits (282), Expect = 5.700e-23
Identity = 115/399 (28.82%), Postives = 169/399 (42.36%), Query Frame = 1
Query:  178 GDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFPTIPESPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLDAEPTSPLASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVS-----RASIVRRDD----IMFFTPPPVLREVVSSAGGA-LNPSDLFVKRVAGLPGDTVTV-GADGTVDV--RPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDG---AFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR 1326
            G +VVP++ +       R  +  +G YPGVEYRIL +                                              +D E  + L  +R   +         + ++PIYPLV++LER  WPV V  R+ P + TP  YN  +A  +L T+++ L   F+ SQA++  VI S SMEPTLQVGDV+LV+KV+     + ++ + +D    I+ F P   L+++V  +GG  L   +LFVKRVA  PG T+ +  A G V++  R P                    LE R+                                       P  ++++  R   +   G     VLGD  + S+DSRVWG L    IVG  LLRV P    G ++
Sbjct:  214 GRIVVPILRSL----AERPAMFRQGTYPGVEYRILRI----------------------------------------------IDPETGADLFYSRPGVD---------YELKPIYPLVQQLER-LWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRKP--------------------LERRDFCGEE----------------------------------PTRLIEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQIQ 498          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO)

HSP 1 Score: 107 bits (266), Expect = 1.670e-21
Identity = 93/287 (32.40%), Postives = 135/287 (47.04%), Query Frame = 1
Query:  505 FTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVS-----RASIVRRDD----IMFFTPPPVLREVVSSAGGA-LNPSDLFVKRVAGLPGDTVTV-GADGTVDV--RPPPSRATGGWLPQSGGGAGGSGLETREGSAXXXXXXXXXXXXXXXXXXXXXXXXRRGAASPAKAPLPDSVLQRITRVDQKVLDG---AFVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFG 1317
            + ++PIYPLV++LER  WPV V  ++ P + TP  YN  +A  +L T++  L   F+ SQA++  VI S SMEPTLQVGDV+LV+K++     + ++ +  +    I+ F P   L+++V  +GG  L   +LFVKRVA  PG T+ +  A G V++  R P                    LE R+                                       P  ++++  R   +   G     VLGD  + S+DSRVWG L    IVG  LLRV P    G
Sbjct:  132 YELKPIYPLVQQLER-LWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRKP--------------------LERRDFCGEE----------------------------------PTRLIEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 363          
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Match: A0A7S1BHK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHK1_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.740e-19
Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = 1
Query:  484 FEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVVLVEKVSRASIVRR---DDIMFFTPPPVLREVVSSAGGAL 858
            F+   + + ++P+YPLV  +ER  WPV +  +E   ++TP  YN  TA+ A++T++S L   F+ S A++   I S SM+PTL+VGDV+LVEK+S    + R    D++ F PPP LR++V+  GG L
Sbjct:  104 FDQPGVDYEVKPVYPLVASMER-QWPVRIAEKELTKIITPLQYNILTAFGAVSTAVSTLVTFFLISLAVSLFFIPSKSMDPTLRVGDVLLVEKISPRLPLHRYAVGDVVMFRPPPALRDIVARNGGRL 230          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig964.18618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L442_9PHAE2.020e-17166.10Peptidase_S26 domain-containing protein n=2 Tax=Ec... [more]
A0A835YRZ1_9STRA2.570e-4351.92Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A0G4EFP7_VITBC8.060e-3641.46Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A448ZBV4_9STRA2.550e-3231.69Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S0Y0G9_HEMAN3.300e-3230.36Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A7S1CZJ0_CYCTE2.370e-2935.40Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S4KZX7_GUITH5.920e-2533.09Mitochondrial inner membrane protease subunit (Fra... [more]
A0A1Z5JWA6_FISSO5.700e-2328.82Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A1Z5KRR1_FISSO1.670e-2132.40Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S1BHK1_9STRA3.740e-1941.41Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig964contigL-elsbetiae_contig964:3241..6165 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.8
Seed ortholog evalue1.3e-113
Seed eggNOG ortholog2880.D8LKT2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Peptidase S24-like
EggNOG OGs2CZ78@1,2S8VM@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1691
Cds size1329
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig964.18618.1prot_L-elsbetiae_contig964.18618.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig964 3241..5803 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817029.887478-CDS-L-elsbetiae_contig964:3240..34741622817029.887478-CDS-L-elsbetiae_contig964:3240..3474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig964 3241..3474 +
1691683994.6768742-CDS-L-elsbetiae_contig964:3240..34741691683994.6768742-CDS-L-elsbetiae_contig964:3240..3474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig964 3241..3474 +
1622817029.8998547-CDS-L-elsbetiae_contig964:3855..43561622817029.8998547-CDS-L-elsbetiae_contig964:3855..4356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig964 3856..4356 +
1691683994.6914132-CDS-L-elsbetiae_contig964:3855..43561691683994.6914132-CDS-L-elsbetiae_contig964:3855..4356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig964 3856..4356 +
1622817029.910822-CDS-L-elsbetiae_contig964:5209..58031622817029.910822-CDS-L-elsbetiae_contig964:5209..5803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig964 5210..5803 +
1691683994.7131479-CDS-L-elsbetiae_contig964:5209..58031691683994.7131479-CDS-L-elsbetiae_contig964:5209..5803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig964 5210..5803 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817029.9243407-UTR-L-elsbetiae_contig964:5803..61651622817029.9243407-UTR-L-elsbetiae_contig964:5803..6165Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig964 5804..6165 +
1691683994.726331-UTR-L-elsbetiae_contig964:5803..61651691683994.726331-UTR-L-elsbetiae_contig964:5803..6165Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig964 5804..6165 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig964.18618.1

>prot_L-elsbetiae_contig964.18618.1 ID=prot_L-elsbetiae_contig964.18618.1|Name=mRNA_L-elsbetiae_contig964.18618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=443bp
MLCSQRPEERALGDVMIPEDVSGAAGEGSGGGIGISAEPPGFLKRLFSVP
KNVRRTAAAGDVVVPVIGARDGWGGIRQRLANRGIYPGVEYRILEVSIFP
TIPESPTTTNTTTTTTTTGSGPSSPPSSSEQQQQQQRQRRADLDAEPTSP
LASAREAPEGSFEDGALVFTMRPIYPLVRRLERDDWPVLVPAREFPVMLT
PFSYNAATAWAALTTSLSLLAVGFVASQALTFSVINSHSMEPTLQVGDVV
LVEKVSRASIVRRDDIMFFTPPPVLREVVSSAGGALNPSDLFVKRVAGLP
GDTVTVGADGTVDVRPPPSRATGGWLPQSGGGAGGSGLETREGSAGLGVD
EGAQGGSGGGVGSGASGRERRGAASPAKAPLPDSVLQRITRVDQKVLDGA
FVLGDNPAASMDSRVWGQLDEGEIVGHALLRVLPPRSFGLLR*
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mRNA from alignment at L-elsbetiae_contig964:3241..6165+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig964.18618.1 ID=mRNA_L-elsbetiae_contig964.18618.1|Name=mRNA_L-elsbetiae_contig964.18618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2925bp|location=Sequence derived from alignment at L-elsbetiae_contig964:3241..6165+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTTTGTTCGCAGAGACCTGAAGAGAGAGCACTAGGGGACGTCATGAT ACCAGAAGATGTCTCGGGCGCTGCGGGCGAGGGTAGTGGCGGTGGCATTG GAATATCCGCGGAGCCCCCGGGTTTCTTGAAGAGGCTTTTTTCTGTTCCG AAGAATGTTCGGCGAACAGCTGCGGCCGGCGACGTTGTTGTGCCCGTAAT CGGCGCCCGGGATGGATGGGGAGGAATACGCCAGGTGCGGTTGAGCCTCG TATCACACACGCCTTGCACTACAATATAGCGTGTGCTTTTCCTGAAGATA TTCATCAACACTCGCGATGGGCACCTCTCTTTGTGCGCGCAGTTGCGAAC TGCTGCTGCCTTGGTAGGCGTACGGCGGCAGCCCCCGCAGTCTTTGCCTA TGTCTGTTTGCTGTCGGCTCTCCCCCTAGCTCTCTCTTTCCTCAAAGAAC ACGAGTGGTGCGAAATATATCCACGGTTGAAAAGGTCCGTTACTTTTCTT CCGCGTGCACCCCGCCGCCCCATCTCATGGCGTCCCCGATAGCTGACCGC ACCTTCTCTCTCCTTGTGTCCGTAAATTACGTGCAAACACGTCTCGCTCA ACTTTTCCTCCCCAGCGCCTTGCCAACCGAGGCATCTACCCTGGCGTCGA GTACCGTATCCTGGAGGTGTCGATTTTCCCGACCATACCAGAATCACCCA CCACCACCAACACCACCACCACCACCACCACCACCGGCAGTGGACCTTCC TCTCCTCCTTCTTCTTCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCGGCG AGCAGATCTCGACGCCGAACCCACGTCCCCCCTCGCCTCGGCCCGGGAGG CGCCGGAAGGATCGTTCGAGGACGGCGCCCTGGTCTTCACGATGCGCCCG ATTTACCCGCTTGTCCGGCGGCTCGAGCGCGACGACTGGCCGGTCCTCGT CCCGGCGAGGGAGTTCCCCGTGATGCTCACGCCGTTCTCCTACAACGCGG CCACCGCCTGGGCCGCGCTCACCACGTCCCTGTCGCTGCTGGCCGTGGGA TTCGTCGCGAGCCAGGCCCTGACATTCTCGGTCATCAACAGTCACAGCAT GGAGCCGACCCTGCAGGTAGGCTGGGCTGGGCTTAGGCTCTGGCTCCGTT GGCACCTTTTTTTCGTTTTGAGGTACTCTTTTCTTTTTCCCCATCCTGAA CTCAGTACAATAACAACTTTTTTTCCTCCGCAATTTCACAAAACGCCCAA GGAGTTCAAGCCTAGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCTGGG GCGGGCGGTACTGTGCCGTTCGATCTTGGGGGGGGGGCGGGTGAGAGGGG CGGCGACACCGTAGTTCGTTTTGTTTTGCTTGCTTGGAAGTGTGCACCCA TTGTTGTGTTGGAGCAGTAGTGCAGAGGGGCGTGGAGAGCTCCAGACTAT CTGTGTCTGCTGATCTTTAGTTTTTGTGCTCTACGGATGACCCTTCGGGT CCACTTTTTTTCTCTCCTTTTTTTCAGTATACCCTTTTTTAGGGTAAGTT ATCCTGTGACCACAGGAATCGCCCGCGTCAGTGGTCGATAAGTACGGACT CAAGTACTGGATAGAGAGATCGTAACGGTTTTTAGTGTGAAGACAACAAC AACGAGTAGGCTTGACTGGCTAACGCTGTTCGGCCAACTTGGTCCAAATC CCCCTCCCGTTTTCAGTCCATCGGCCTTTATTCCAGCCTCAAGATATCAC CGGTATCGTCGACAATGACAACAGCAACAATGTTCGTTACCCTTGCACCG GTTAGTGCGATCGAGCAGCAGATCAATGGATTGATGTTTACGCCGTGTCG ACACGTAACCGACAAACAACATATAGGCTTTGTCTCATGCAACGCCAACG AGCGACGTACCAGCATTTAGCCGCCGATCCGAAGGACTAACCCCCCCCCG CCTCGCCGGACGAACACAGGTCGGCGACGTGGTCCTTGTGGAGAAGGTGT CGAGGGCGTCCATCGTCCGGAGAGACGACATCATGTTCTTCACGCCCCCG CCCGTACTGAGGGAGGTGGTCTCCTCGGCGGGGGGAGCCCTCAACCCGAG CGACCTCTTCGTGAAGCGCGTGGCCGGCCTTCCCGGGGACACGGTGACCG TGGGCGCCGATGGGACCGTGGACGTCCGGCCGCCGCCGTCGCGAGCGACC GGAGGGTGGCTGCCACAAAGCGGGGGGGGTGCCGGGGGTAGCGGCCTTGA AACCAGAGAGGGATCGGCGGGGTTGGGCGTAGATGAGGGGGCGCAAGGGG GAAGCGGCGGCGGAGTAGGATCGGGCGCGTCCGGAAGGGAAAGGAGGGGG GCGGCCTCGCCAGCTAAGGCGCCCCTCCCAGACAGCGTGCTGCAGCGAAT AACTCGCGTCGATCAGAAAGTCCTGGACGGGGCATTTGTTCTCGGGGATA ACCCGGCGGCGTCAATGGACTCGAGGGTGTGGGGGCAGCTTGACGAAGGG GAGATTGTGGGGCATGCGCTACTGAGAGTCTTGCCTCCCCGTTCGTTCGG ACTTCTGCGATAGTAGACAGGGAGGGGGTTGATCCACTAACTACAGAATG GGGTCTGAAACTTCAGTTTCGATTCTGAATCTGTGGGCTGTCGACTTCCA ATAGCCCAAAAAACGTCAGTATGACAGCATCTGTCTTTTTCGGTTGAAGA AAAAGCTATAAGCACATGCTGAGGGGCACAGACCTGCACAGCTGTATTGA CAAGGGCGGAGCGTCCGCACAAAGCACCCGGTTGAGCACTACTGTTGCTG TGTTTTGGAGAGAGCTGTTTCCGAAGGTTATCTAACCCCACAGCTGTTTT TTGCGGGAAAAGAGGCGTTTGAGTTCAAAATCTTCGGTTCAAAAATCTGG GTTCAAAACTCTCCTTGCATCACCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig964:3241..6165+

>mRNA_L-elsbetiae_contig964.18618.1 ID=mRNA_L-elsbetiae_contig964.18618.1|Name=mRNA_L-elsbetiae_contig964.18618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2658bp|location=Sequence derived from alignment at L-elsbetiae_contig964:3241..6165+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTTTGTTCGCAGAGACCTGAAGAGAGAGCACTAGGGGACGTCATGAT
ACCAGAAGATGTCTCGGGCGCTGCGGGCGAGGGTAGTGGCGGTGGCATTG
GAATATCCGCGGAGCCCCCGGGTTTCTTGAAGAGGCTTTTTTCTGTTCCG
AAGAATGTTCGGCGAACAGCTGCGGCCGGCGACGTTGTTGTGCCCGTAAT
CGGCGCCCGGGATGGATGGGGAGGAATACGCCAGATGCTTTGTTCGCAGA
GACCTGAAGAGAGAGCACTAGGGGACGTCATGATACCAGAAGATGTCTCG
GGCGCTGCGGGCGAGGGTAGTGGCGGTGGCATTGGAATATCCGCGGAGCC
CCCGGGTTTCTTGAAGAGGCTTTTTTCTGTTCCGAAGAATGTTCGGCGAA
CAGCTGCGGCCGGCGACGTTGTTGTGCCCGTAATCGGCGCCCGGGATGGA
TGGGGAGGAATACGCCAGCGCCTTGCCAACCGAGGCATCTACCCTGGCGT
CGAGTACCGTATCCTGGAGGTGTCGATTTTCCCGACCATACCAGAATCAC
CCACCACCACCAACACCACCACCACCACCACCACCACCGGCAGTGGACCT
TCCTCTCCTCCTTCTTCTTCCGAGCAGCAGCAGCAGCAGCAGCGGCAGCG
GCGAGCAGATCTCGACGCCGAACCCACGTCCCCCCTCGCCTCGGCCCGGG
AGGCGCCGGAAGGATCGTTCGAGGACGGCGCCCTGGTCTTCACGATGCGC
CCGATTTACCCGCTTGTCCGGCGGCTCGAGCGCGACGACTGGCCGGTCCT
CGTCCCGGCGAGGGAGTTCCCCGTGATGCTCACGCCGTTCTCCTACAACG
CGGCCACCGCCTGGGCCGCGCTCACCACGTCCCTGTCGCTGCTGGCCGTG
GGATTCGTCGCGAGCCAGGCCCTGACATTCTCGGTCATCAACAGTCACAG
CATGGAGCCGACCCTGCAGCGCCTTGCCAACCGAGGCATCTACCCTGGCG
TCGAGTACCGTATCCTGGAGGTGTCGATTTTCCCGACCATACCAGAATCA
CCCACCACCACCAACACCACCACCACCACCACCACCACCGGCAGTGGACC
TTCCTCTCCTCCTTCTTCTTCCGAGCAGCAGCAGCAGCAGCAGCGGCAGC
GGCGAGCAGATCTCGACGCCGAACCCACGTCCCCCCTCGCCTCGGCCCGG
GAGGCGCCGGAAGGATCGTTCGAGGACGGCGCCCTGGTCTTCACGATGCG
CCCGATTTACCCGCTTGTCCGGCGGCTCGAGCGCGACGACTGGCCGGTCC
TCGTCCCGGCGAGGGAGTTCCCCGTGATGCTCACGCCGTTCTCCTACAAC
GCGGCCACCGCCTGGGCCGCGCTCACCACGTCCCTGTCGCTGCTGGCCGT
GGGATTCGTCGCGAGCCAGGCCCTGACATTCTCGGTCATCAACAGTCACA
GCATGGAGCCGACCCTGCAGGTCGGCGACGTGGTCCTTGTGGAGAAGGTG
TCGAGGGCGTCCATCGTCCGGAGAGACGACATCATGTTCTTCACGCCCCC
GCCCGTACTGAGGGAGGTGGTCTCCTCGGCGGGGGGAGCCCTCAACCCGA
GCGACCTCTTCGTGAAGCGCGTGGCCGGCCTTCCCGGGGACACGGTGACC
GTGGGCGCCGATGGGACCGTGGACGTCCGGCCGCCGCCGTCGCGAGCGAC
CGGAGGGTGGCTGCCACAAAGCGGGGGGGGTGCCGGGGGTAGCGGCCTTG
AAACCAGAGAGGGATCGGCGGGGTTGGGCGTAGATGAGGGGGCGCAAGGG
GGAAGCGGCGGCGGAGTAGGATCGGGCGCGTCCGGAAGGGAAAGGAGGGG
GGCGGCCTCGCCAGCTAAGGCGCCCCTCCCAGACAGCGTGCTGCAGCGAA
TAACTCGCGTCGATCAGAAAGTCCTGGACGGGGCATTTGTTCTCGGGGAT
AACCCGGCGGCGTCAATGGACTCGAGGGTGTGGGGGCAGCTTGACGAAGG
GGAGATTGTGGGGCATGCGCTACTGAGAGTCTTGCCTCCCCGTTCGTTCG
GACTTCTGCGATAGGTCGGCGACGTGGTCCTTGTGGAGAAGGTGTCGAGG
GCGTCCATCGTCCGGAGAGACGACATCATGTTCTTCACGCCCCCGCCCGT
ACTGAGGGAGGTGGTCTCCTCGGCGGGGGGAGCCCTCAACCCGAGCGACC
TCTTCGTGAAGCGCGTGGCCGGCCTTCCCGGGGACACGGTGACCGTGGGC
GCCGATGGGACCGTGGACGTCCGGCCGCCGCCGTCGCGAGCGACCGGAGG
GTGGCTGCCACAAAGCGGGGGGGGTGCCGGGGGTAGCGGCCTTGAAACCA
GAGAGGGATCGGCGGGGTTGGGCGTAGATGAGGGGGCGCAAGGGGGAAGC
GGCGGCGGAGTAGGATCGGGCGCGTCCGGAAGGGAAAGGAGGGGGGCGGC
CTCGCCAGCTAAGGCGCCCCTCCCAGACAGCGTGCTGCAGCGAATAACTC
GCGTCGATCAGAAAGTCCTGGACGGGGCATTTGTTCTCGGGGATAACCCG
GCGGCGTCAATGGACTCGAGGGTGTGGGGGCAGCTTGACGAAGGGGAGAT
TGTGGGGCATGCGCTACTGAGAGTCTTGCCTCCCCGTTCGTTCGGACTTC
TGCGATAG
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