|
Homology
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A6H5L087_9PHAE (Calreticulin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L087_9PHAE) HSP 1 Score: 314 bits (804), Expect = 6.330e-103 Identity = 219/241 (90.87%), Postives = 226/241 (93.78%), Query Frame = 1
Query: 1 KIMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCTACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEEL 723
+IMFGPDKCGTSNARTHVIFNYP KGEGDD NLL+KKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLE+EFDF+APKEIKDP+QSKPE XXXXXXXXXXXXXGYDDIP XXXXXXXXXXXXXX EDGEWEPAMIKNPE+KXXXXXXXXXXXXXXXXXXXXXXXXXXXX D LG+RCT CTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAE TWA KKDKEKEAHEEL
Sbjct: 134 QIMFGPDKCGTSNARTHVIFNYPPKGEGDDGNLLIKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEDEFDFLAPKEIKDPEQSKPEDWVDXXXXXXXXXXXXXGYDDIPSXXXXXXXXXXXXXXEEEDGEWEPAMIKNPEFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKTLGKRCTECTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEETWATKKDKEKEAHEEL 374
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A7S2S2C9_9STRA (Calreticulin n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C9_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.180e-64 Identity = 179/248 (72.18%), Postives = 205/248 (82.66%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCT-ACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQKKQKEE 744
+MFGPD CG+SN RTHVI +Y +K D NLL+KK+V E +Q SHLYT ++PD TFEVF+D +SVR+G L++EFDF+ KEIKDPDQSKP XXXXXXXXXXXXXXXX GYDDIP XXXXXXXXXXXXXX +DGEWEP MI NPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXX D ++ C CTHVGFELWQV +GTIFD+I++TDSLEEAQKFAE T+ KKD EKE +E+QKKQ+EE
Sbjct: 149 VMFGPDICGSSNKRTHVILHYDKK----DDNLLIKKNVGTEDNQLSHLYTFVLRPDNTFEVFVDNKSVRSGKLDDEFDFLPAKEIKDPDQSKPAXXXXXXXXXXXXXXXXEGYDDIPEEXXXXXXXXXXXXXXEDDGEWEPPMIDNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDEEMYAVCKDGCTHVGFELWQVKSGTIFDDIIITDSLEEAQKFAEETFFKKKDAEKEMFDEIQKKQREE 392
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A1Z5JJA1_FISSO (Calreticulin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJA1_FISSO) HSP 1 Score: 209 bits (533), Expect = 1.930e-62 Identity = 169/246 (68.70%), Postives = 199/246 (80.89%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCT-ACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQKKQK 738
+MFGPD CG++N RTHVI NYP K E NLL+ K++ EKD SHLYTL ++PD TFEVF+D +SVR+G LE+EFDF+ PK+IKDPD XXXXXXXXXXXXXXXX GYDDIP XXXXXXXXXXXX +DG+WEP MI NPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXX DP + + C CTH+GFELWQVTAGT+FD+ILVTDSLEEAQKF E T+ KKD EK ++++ ++++K
Sbjct: 133 VMFGPDICGSANKRTHVILNYPAKNE----NLLINKEIPPEKDNLSHLYTLVIRPDNTFEVFVDNKSVRSGKLEDEFDFLEPKQIKDPDAXXXXXXXXXXXXXXXXXXXXEGYDDIPKEXXXXXXXXXXXXSDEDDGQWEPPMIDNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXKYDPDMYKVCKDGCTHIGFELWQVTAGTMFDDILVTDSLEEAQKFGEETFFKKKDAEKASYDKFKEEEK 374
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A7S1ZF32_TRICV (Calreticulin n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF32_TRICV) HSP 1 Score: 209 bits (532), Expect = 2.940e-62 Identity = 170/232 (73.28%), Postives = 194/232 (83.62%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCTA-CTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKD 696
+MFGPD CG+SN +TH I +Y +K + NLL+KK++ E DQ SHLYTL V+PD TFEVF+D +SVR+G LE++FDF+ PKEIKDP+QSKP+XXXXXXXXXXXXXXXX GYDDIPXXXXXXXXXXXXXXXX +DGEWEP M+ NPEY XXXXXXXXXXXXXXXXXXXXXXXXXXX D K+ C CTHVGFELWQV GTIFD+I+VTDSLEEAQKFAE T+ KKD
Sbjct: 134 VMFGPDICGSSNKKTHTILHYEKKAD----NLLIKKEIPCENDQLSHLYTLVVRPDNTFEVFVDNKSVRSGKLEDQFDFLPPKEIKDPEQSKPDXXXXXXXXXXXXXXXXEGYDDIPXXXXXXXXXXXXXXXXEDDGEWEPPMVDNPEYNXXXXXXXXXXXXXXXXXXXXXXXXXXXAYDDKMHAVCEGGCTHVGFELWQVKTGTIFDDIIVTDSLEEAQKFAEDTFFKKKD 361
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: B8C4G1_THAPS (Calreticulin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4G1_THAPS) HSP 1 Score: 208 bits (529), Expect = 4.510e-62 Identity = 172/248 (69.35%), Postives = 200/248 (80.65%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCT-ACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQKKQKEE 744
+MFGPD CG+SN RTHVIF+Y +K D NLL+KK+V E +Q SHLYTL ++PD TFEVF+D +SVR+G LE+EFDF+ ++IKDP++SKP XXXXXXXXXXXXXXXX GYD+IP XXXXXXXXXXX +DGEWEP M+ NPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXX D + C CTHVGFELWQV AGT+FD+I+VTDSLEEAQKFAE T+ KKD EKE + QKK +EE
Sbjct: 133 VMFGPDICGSSNKRTHVIFHYDKK----DENLLIKKNVGCEDNQLSHLYTLVLRPDNTFEVFVDNKSVRSGKLEDEFDFLPDEKIKDPNESKPAXXXXXXXXXXXXXXXXEGYDEIPAEIXXXXXXXXXXXDDEDDGEWEPPMVDNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDENMYAVCKDGCTHVGFELWQVKAGTLFDDIIVTDSLEEAQKFAEETFFKKKDAEKEMFDAAQKKDREE 376
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A835ZEE0_9STRA (Calreticulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE0_9STRA) HSP 1 Score: 209 bits (531), Expect = 4.980e-62 Identity = 160/246 (65.04%), Postives = 188/246 (76.42%), Query Frame = 1
Query: 1 KIMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCTACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQKKQK 738
++MFGPD CG+ NARTHVIF+Y K E NLL K DV++E+D+ +H+YTLHVK D T+EV+IDQ SVRAG LE++F F+ P++I DP+ +KPE XXXXXXXXXXX DD+P XXXXXXX EDGEWEPA I NP+Y+ XXXXXXXXXXXXXXXXXXXXXXXXXXX DP L +RC CTHVGFELWQVT+GTIFD+I+VTDSL EA AE WA KDKEK EE+ KK+K
Sbjct: 134 QVMFGPDICGSGNARTHVIFHYAPKNE----NLLAKTDVRVERDRLTHVYTLHVKADATYEVYIDQTSVRAGRLEDDFAFLPPRQIPDPNVTKPEDWVDERXXXXXXXXXXXXXDDVPKTIPDADXXXXXXXDDAEDGEWEPAQIPNPDYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPLLYRRCDGCTHVGFELWQVTSGTIFDDIIVTDSLPEAFALAEEGWARWKDKEKAMWEEVSKKEK 375
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: K0SAG6_THAOC (Calreticulin n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SAG6_THAOC) HSP 1 Score: 207 bits (528), Expect = 1.170e-61 Identity = 170/242 (70.25%), Postives = 200/242 (82.64%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCTA-CTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQ 726
+MFGPD CG+SN RTHVIF+Y +K EG LL+KK+V E DQ SHLYTL ++PD TFEVFID +SVR+G L++EFDF+ KEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIP XXXXXXXXXXXX +DGEWE MI NP+YKXXXXXXXXXXXXXXXXXXXXXXXXXXX D ++ C CTHVGFELWQV +GT+FD+I +TDSLEEAQ+FAE ++ KK+ EK+ ++++Q
Sbjct: 135 VMFGPDICGSSNKRTHVIFHYDKKDEG----LLIKKNVNTESDQLSHLYTLVLRPDNTFEVFIDNKSVRSGKLDDEFDFLPEKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPAEXXXXXXXXXXXXDDEDDGEWEAPMIDNPDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXEYDEEMYAVCKGGCTHVGFELWQVKSGTVFDDIFITDSLEEAQQFAEESFFKKKEGEKKMYDDIQ 372
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A7R9WHL1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHL1_9STRA) HSP 1 Score: 203 bits (516), Expect = 7.880e-61 Identity = 151/227 (66.52%), Postives = 172/227 (75.77%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCT-ACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTW 681
+MFGPDKCG+SN +THVI + +K D NLL+KK+V E D SHLYTL V+PD TFEVF+D +SVR+G LE+EFDF+ PK IKDPDQSKP GYDDIP XXXXXXXXXXXXXX +DGEWEP M+ NPE+KXXXXXXXXXXXXXXXXXXXXXXXXXXX D K+ C CTHVGFELWQV GT+FD+I+VTDSLEEAQKFAE T+
Sbjct: 50 VMFGPDKCGSSNKKTHVILHSDKK----DDNLLIKKEVSGEFDTLSHLYTLVVRPDNTFEVFVDNKSVRSGKLEDEFDFLPPKTIKDPDQSKPSDWVDEAEIDDPEDVKPEGYDDIPEEXXXXXXXXXXXXXXEDDGEWEPPMVDNPEFKXXXXXXXXXXXXXXXXXXXXXXXXXXXAYDDKMHAVCADGCTHVGFELWQVKTGTLFDDIIVTDSLEEAQKFAEETF 272
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A7S1Y210_9STRA (Calreticulin n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y210_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.890e-60 Identity = 172/242 (71.07%), Postives = 195/242 (80.58%), Query Frame = 1
Query: 4 IMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCT-ACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQ 726
+MFGPD CG+SN RTHVI NY K D NLL+KK+V E D +HLYTL V+PD T EVF+D +SVR G LE+EFD + K+IKDP+ SKPEXXXXXXXXXXXXXXXXXGYDDIP XXXXXXXXXXXXX +DGEWE MI NP+YKXXXXXXXXXXXXXXXXXXXXXXXXXXX D + + C CTHVGFELWQVT GT+FD+ILVTDSLEEAQKFAE T+ KKD EKE ++++Q
Sbjct: 163 VMFGPDICGSSNKRTHVILNYAPK----DENLLIKKNVNTESDNVTHLYTLVVRPDNTVEVFVDNKSVRQGKLEDEFDMLPEKQIKDPEASKPEXXXXXXXXXXXXXXXXXGYDDIPAEIXXXXXXXXXXXXXEDDGEWEAPMIDNPDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXKYDDNMYKVCKDGCTHVGFELWQVTTGTLFDDILVTDSLEEAQKFAEETFFKKKDGEKEMYDKIQ 400
BLAST of mRNA_L-elsbetiae_contig9633.18612.1 vs. uniprot
Match: A0A7S2BRV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRV9_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.170e-59 Identity = 162/236 (68.64%), Postives = 184/236 (77.97%), Query Frame = 1
Query: 1 KIMFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTLHVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEXXXXXXXXXXXXXXXXXGYDDIPXXXXXXXXXXXXXXXXXEDGEWEPAMIKNPEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPKLGQRCTACTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKE 708
+IMFGPD CG S RTHVIFNYP K D NL K ++K E DQ SHLYTLH+K D ++EVFID+ES + G LEE +DF+ PKEIKDP +SKPE XXXXXXXXXXXXGYDDIP XXXXXXXXXXX +DGEWEP MI NP+YKXXXXXXXXXXXXXXXXXXXXXXXXXXX D L QRC C +GFELWQV +GT+FD+I+VTDSL+EA+ FA+ T+ AKKD E E
Sbjct: 140 QIMFGPDMCG-STKRTHVIFNYPAK----DENLEAKSEIKCETDQKSHLYTLHIKADASYEVFIDEESKQTGKLEEGWDFLLPKEIKDPKESKPEDWVDAXXXXXXXXXXXXGYDDIPAQIXXXXXXXXXXXDEEDDGEWEPPMISNPDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDKNLFQRCKDCAMIGFELWQVKSGTMFDDIIVTDSLDEAKAFAKETFFAKKDAESE 370
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 314.7 |
Seed ortholog evalue | 3.9e-83 |
Seed eggNOG ortholog | 2880.D7FZD0 |
Preferred name | CALR |
KEGG ko | ko:K08057,ko:K10098 |
KEGG Pathway | ko04141,ko04145,ko04612,ko05142,ko05166,map04141,map04145,map04612,map05142,map05166 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000122,GO:0001669,GO:0001846,GO:0001848,GO:0001849,GO:0002376,GO:0002396,GO:0002397,GO:0002474,GO:0002478,GO:0002479,GO:0002501,GO:0002502,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005102,GO:0005178,GO:0005488,GO:0005506,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005790,GO:0005793,GO:0005794,GO:0005829,GO:0005844,GO:0005886,GO:0006355,GO:0006357,GO:0006417,GO:0006457,GO:0006611,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006897,GO:0006898,GO:0006906,GO:0006909,GO:0006911,GO:0006913,GO:0006950,GO:0006984,GO:0006986,GO:0006996,GO:0007010,GO:0007044,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007422,GO:0007507,GO:0007568,GO:0007569,GO:0007588,GO:0007610,GO:0007635,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008284,GO:0009266,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009755,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009897,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010226,GO:0010324,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010594,GO:0010595,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010632,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010810,GO:0010811,GO:0010941,GO:0010948,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014706,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016528,GO:0016529,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019884,GO:0019899,GO:0019953,GO:0022008,GO:0022414,GO:0022417,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030003,GO:0030029,GO:0030036,GO:0030100,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030176,GO:0030246,GO:0030334,GO:0030335,GO:0030336,GO:0030421,GO:0030431,GO:0030496,GO:0030518,GO:0030522,GO:0030659,GO:0030666,GO:0030670,GO:0030865,GO:0030866,GO:0030968,GO:0031012,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031581,GO:0031625,GO:0031647,GO:0031958,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0031984,GO:0032101,GO:0032103,GO:0032268,GO:0032269,GO:0032355,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033143,GO:0033144,GO:0033218,GO:0033365,GO:0033554,GO:0033574,GO:0033993,GO:0034248,GO:0034249,GO:0034329,GO:0034330,GO:0034504,GO:0034613,GO:0034620,GO:0034622,GO:0034975,GO:0034976,GO:0035051,GO:0035257,GO:0035258,GO:0035966,GO:0035967,GO:0036500,GO:0040012,GO:0040013,GO:0040017,GO:0040020,GO:0042048,GO:0042127,GO:0042175,GO:0042221,GO:0042277,GO:0042493,GO:0042562,GO:0042590,GO:0042592,GO:0042692,GO:0042824,GO:0042886,GO:0042921,GO:0042981,GO:0043067,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044183,GO:0044238,GO:0044322,GO:0044389,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0045169,GO:0045184,GO:0045335,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045785,GO:0045786,GO:0045787,GO:0045807,GO:0045892,GO:0045934,GO:0046677,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048232,GO:0048284,GO:0048385,GO:0048387,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048699,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048878,GO:0050681,GO:0050764,GO:0050766,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050821,GO:0050839,GO:0050896,GO:0050920,GO:0050921,GO:0051049,GO:0051050,GO:0051082,GO:0051087,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051208,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051270,GO:0051271,GO:0051272,GO:0051427,GO:0051445,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051961,GO:0055007,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060205,GO:0060255,GO:0060284,GO:0060537,GO:0060627,GO:0061024,GO:0061025,GO:0061061,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070887,GO:0071156,GO:0071157,GO:0071241,GO:0071248,GO:0071285,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071556,GO:0071682,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0080090,GO:0090174,GO:0090398,GO:0097159,GO:0097223,GO:0097305,GO:0097708,GO:0098552,GO:0098553,GO:0098588,GO:0098657,GO:0098771,GO:0098796,GO:0098805,GO:0098827,GO:0099024,GO:0099503,GO:1900024,GO:1900026,GO:1901163,GO:1901164,GO:1901222,GO:1901224,GO:1901363,GO:1901564,GO:1901654,GO:1901700,GO:1902531,GO:1902533,GO:1902679,GO:1903506,GO:1903507,GO:1990668,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000147,GO:2000241,GO:2000242,GO:2000508,GO:2000510,GO:2001141 |
EggNOG free text desc. | unfolded protein binding |
EggNOG OGs | KOG0674@1,KOG0674@2759 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko03110,ko04091 |
Exons | 4 |
Model size | 750 |
Cds size | 744 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817029.236962-CDS-L-elsbetiae_contig9633:2339..2489 | 1622817029.236962-CDS-L-elsbetiae_contig9633:2339..2489 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 2340..2489 - |
1691683994.152964-CDS-L-elsbetiae_contig9633:2339..2489 | 1691683994.152964-CDS-L-elsbetiae_contig9633:2339..2489 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 2340..2489 - |
1622817029.2508268-CDS-L-elsbetiae_contig9633:2688..2913 | 1622817029.2508268-CDS-L-elsbetiae_contig9633:2688..2913 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 2689..2913 - |
1691683994.1696556-CDS-L-elsbetiae_contig9633:2688..2913 | 1691683994.1696556-CDS-L-elsbetiae_contig9633:2688..2913 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 2689..2913 - |
1622817029.260992-CDS-L-elsbetiae_contig9633:3823..4015 | 1622817029.260992-CDS-L-elsbetiae_contig9633:3823..4015 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 3824..4015 - |
1691683994.186247-CDS-L-elsbetiae_contig9633:3823..4015 | 1691683994.186247-CDS-L-elsbetiae_contig9633:3823..4015 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 3824..4015 - |
1622817029.2721474-CDS-L-elsbetiae_contig9633:7093..7270 | 1622817029.2721474-CDS-L-elsbetiae_contig9633:7093..7270 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 7094..7270 - |
1691683994.1969519-CDS-L-elsbetiae_contig9633:7093..7270 | 1691683994.1969519-CDS-L-elsbetiae_contig9633:7093..7270 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9633 7094..7270 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817029.282334-UTR-L-elsbetiae_contig9633:7270..7276 | 1622817029.282334-UTR-L-elsbetiae_contig9633:7270..7276 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9633 7271..7276 - |
1691683994.2141027-UTR-L-elsbetiae_contig9633:7270..7276 | 1691683994.2141027-UTR-L-elsbetiae_contig9633:7270..7276 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9633 7271..7276 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9633.18612.1 >prot_L-elsbetiae_contig9633.18612.1 ID=prot_L-elsbetiae_contig9633.18612.1|Name=mRNA_L-elsbetiae_contig9633.18612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
MFGPDKCGTSNARTHVIFNYPEKGEGDDANLLVKKDVKMEKDQASHLYTL HVKPDGTFEVFIDQESVRAGSLEEEFDFIAPKEIKDPDQSKPEDWVDEKK IPDPEDVKPEGYDDIPKEIPDPKAEKPDDWDDEEDGEWEPAMIKNPEYKG KWKPKMIANPDYKGSWEHPMVPNPDYKADPKLGQRCTACTHVGFELWQVT AGTIFDEILVTDSLEEAQKFAEGTWAAKKDKEKEAHEELQKKQKEEKE back to topmRNA from alignment at L-elsbetiae_contig9633:2340..7276- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9633.18612.1 ID=mRNA_L-elsbetiae_contig9633.18612.1|Name=mRNA_L-elsbetiae_contig9633.18612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4937bp|location=Sequence derived from alignment at L-elsbetiae_contig9633:2340..7276- (Laminarionema elsbetiae ELsaHSoW15) AAGATCATGTTCGGACCTGACAAGTGCGGCACCAGCAACGCGCGAACGCA
CGTGATCTTCAACTACCCGGAGAAGGGAGAGGGCGACGACGCCAACCTGC
TCGTCAAGAAGGACGTCAAGATGGAGAAAGACCAGGCGTCGCACCTCTAC
ACCTTGCACGTCAAGCCCGACGGAACTTTCGAGGTGCGGTATCGACTGGC
CCGCTCAAAAGAAACACGCATGTGGTTTGATTATTTTTCTGAGATGCCTC
AAAAGAGAGTGAAGAATCCACCCGTGTCGAGCAGATCCTGTCTTAATCCA
ACGCATTCGACATAAAAGTTCCCACTGCTTGCGTGGTCCGTAGTTTGATT
GCAGGACACGTATCGAATATACGACACATAAGGGGTGAGGAAGTCTGAGT
TTGCTCGAAGAGAGTTACGCAGCCAAAGCTACCCGCTGTCCGGAGGTGTG
TATGGACCTCTTGAACGAAAAACGAGTATGTAGTTCCTTTTTTGTTCTGA
CACCGTTTTCAATATTTATATTTTTAATAAATCAATCGCGTGTGCACCAC
TTTTTGGTCCGTGCACAACAATTTGTCCTAGCGTTTTGTGCGATAACTCT
TGTCAGCGAAATCGTGACCGCCTCGTCGATCTGCGTCGATAGCTTGAAAT
ATGTTTTCAATAGATGATGGCCTAGGGTGTGTGGGTTACCCTAGGCTGCT
TCCTTAGTTTCGTTTTTCTATCTATTAGTTGCTGTTCTTCTCGGTAGCGT
CGGCTTTCGGTGATGTAGGTGTTCGCGCTCGCTACATCCAGACATTTCAT
TTGTCTCTCGCGTCCCTTCGGGTTATTTCAATCGCAGTTGCGTGTCGTGC
TCAATCAATTGTTCACCTGTACATGCCTCTGGCCAACATTTTTCTTCGTT
TCCGCCCCCCTCTCGCACACGAGCAGCTCACTCGTGGGCACACACAGAGT
TCTTTGGCCTTCTTGGCAATACCTGATGCTAATTCGGCAGCAGCCTGAGC
GGATGCAACATTTTCCGGCTTAGCATCGTCTCGTGCCCTCTCAGCTCTCG
CCTGCATAGATAGTTTCTTCGGCATCTGTCCTATTCTTCGCTATCCAAGG
TTCCAATGTTCTACTGTTCAAGAGGTTGGTCTTCGCATCTCTTTTTTTTC
GCATGGCGTCTTGCGTTGCCTTCTTTCTCCGATATTCTCTTCGAACATTT
TCAGCAGCCACCGCCAGCGACGCGGCTATCGCGGCGGCAGCACAAAAAGG
GAGCATTTTTTCCTCTTTTGATCGCGGCTCTCTTTCGATGAACCGATGTC
CTCTTCGATGCTAACATCCTCTTCTGTTTGCTGGCACCAAACACGATCGC
TGCTCTCTCAGTTTTCTTTCGCCGGGCTGCTCGATGTCTCTACTCCTGGT
CAGCAGCATCCTCCTCCTCCTCCTCCCTTCTCCTCCCCCTCCTCCCCCTC
CTTTTCTTCCCCGACATTTCCCGTCTTAGCTTTCTTCTTAGGAGGCATTG
CTGGACTCTAGATATTTCCCAACCACGGCCTGCATGTTGATGCTGCGCGC
CTTCGTGGAATCTAGACAGCTGATCGAAAGTCGGCAGTTTATTGTGCAAA
CGTTACTGTGCGAAGCGTTATCTATTGCACCGCAAATATATGGGTCGACA
TTGCGTTTGTTTGTTTCTCGCGTCGCTTCGGGATAATTGGATCGTAGTAT
TGCGTGTCGTGCGCGATGAATTGTCATCTGCAAGTGCCTGCTGCGATCGT
CGCATATGTAACGCCTGTCATAGGTCCACCTACATGGTACATCTTGCGTA
CACATACGTGATGCGTCTCCGCAATTTCGCCGCGTTTATTTCTTGTTTGA
AAGCATCCCGCATTCCATAACCTGCCGTCGTAGGTTACGCGCTTCCCATG
CTGCAGCACTGTGTTCTCTTTGTGTGCGAAGGCATAAGCGCTGTGTGAGA
AGGCATGGCCAAGATGTGGTGGCCGTTGCTTTTCTTGGATGCGAGAATTT
CGATGATGGGCGTTTGTGTTTGTGGCGTCTCCTTATTATTTTAGAGAGGC
AAATCGACGTCTAAATTGGCGAGAATTTGATGCACGGGGAACATACCGCG
CTAGTCCGTCAGCAGTTCGGTGTTCCTGCCGTGTGGGAAGGCCATGGCTG
CGAGAGGGCTGATGTATCTTCCGTGTGTGCAGAGATTTTGACGAAACAGT
TTCGAAAAACACCGTTAGATCACATTATTTTGGGCTTCAATTTTCTATAT
AGGTCTGAGATCTTAGTGCAGAGGGAAGACCTTAGTTATAAGGAACTAAG
GAATAGTGGTATTCTATGTTTAATCGTTTTGGCGTAGACGTGAGCTGCTT
TTTGATAACTGCTCGCCGCTGAGTCTAGATATACTACTCATAGCTAGCCT
CGGTGCGGGTTTCACTCTTCGAATCGCTCTGTGAGCGTCAAATCAGCGCT
GCCTTCGAACACGCACGAAGGGGCTCGGCGAGGCCAGCACTAGTAGATAG
CAGCAGCTGTAGTTAGTGCCCTACAGGACGGTTTTTGGTATGAACGAGTG
TTCTACACACCTGGACCCGTACGCTTGCCGATGCGCGTGGTTTTCTCGTG
GGTTATTGACGTCTGGTTGTGCCCCCAAATCACCTCAAATCGTGCTGTGG
ATCTGCGGACTGGCTCTCTCTCTCGTCCGAGCTCCTCTAACTCAGTACGA
ATGCCAAGCGATGCTGAGATTTAGTGCCTTGCAAGATTTGAAGCCTATTT
TTTTGCCCTACTATGCAGCCAATGACCTTATCCACACGTCCCCAGACCTG
GCTGGGATTATTGCCTCCAAGCTGAGCTGTCGACCTCTCCGCCTCCGCCT
ACACTGAGGCCCTGTGGTTTTCACGTCCCAGGAAGTCCCGCCCTAAAGAA
CCCTCCCGCGCATGCGCCCTCTTGATAACGATTGCACATACCATTGTTGG
AGGAAAATAAACATATTGACCTAACATATATTGACGGAGCCCCATTTCTA
CACCACGGAACCCCCTTTATACCACGGAGCCTCGCAACCAATATGCCAAG
GGGTCACCCAGGTGACAATCCTGGAAGCATACCCCCCTCCCCCCCTTCAT
CTTTTTTGGCCCCACCGAGGTTTGGGAAACATATACAGTGTTGTTACGTT
GGGGGGACCGGCAGATAATTACCCTAGAAGGGGCTCAGCAGATGTGATTC
GGTTCGCAGAACTCCTCCATATACCACCACACTAAACTGCAACACACCAC
ACCCCCAGCAGGTGTTCATCGACCAGGAGAGCGTTCGGGCAGGGTCCCTC
GAGGAAGAGTTCGACTTTATCGCTCCCAAGGAGATCAAGGACCCCGACCA
GAGCAAACCGGAGGACTGGGTCGACGAGAAGAAAATCCCTGACCCGGAAG
ACGTCAAGCCGGAGGGTTACGACGACATCCCCAAGGAGATCCCGGACCCG
AAGGTTGGTACTGTTGCTCGTCTCTGTTGTTGTCGTTGTTGCTGTTGTTG
ACGATGGTGCTGTTGTTGTTTTGCCTTGCGCCCAATCGGCTGGGACATAA
TAGACTCTTGCTCACCTGCCGTTGGGCACTACGGGTGTTGGGCTTGTAAG
ACTCATCCTGAGCTTCGCCTCTTGTGTTACTAGTATGATTGTTTTTCTGG
CGAACACCGGTGGTCTTGCATGTACGACAGTCTGGACGTCTGGACCCATA
AAAAATAGTAGTGAGTCTGTACGGGGGAGCTGATGCAGACACACCGCCCT
CCCAGCTGCAGCGGTGCCCGTGTGGACGTCGTATTAGTTTTGTATTTAGT
GCTCAATAAACCAGAGGGAGTTGTTGAAAGAGAAGGTAAGCAAAGAAAGA
TACACAAGAGTCGTCCGTATCTTCAGGCAGGGGGTTCTGCCTGCTGCTTA
TTGGCGCAAGCAAGAATCAAATGGAAGGTGTGTTTTGTTTTTTTGTCTCT
TTTTGAAAATAAATCAGGGAATCGACGAAAAAACCTCCCTACATCCATGA
AGGATTAAAAATACAAATAACGGGACGATTTACCCTTCGTCGTTTCCAAA
ATGATGAAATTCGTCGAACTTTAAAATTAGATTTTAAAAATGTTAATATT
CAAAATTTAATAGAATGATATGAAAAGCAATAAATTTAAAATAAGAAAGA
TGAGATTTAAAAATAGATACAAATCTTGTTCAAATCTTTTGTAAGATTTT
CAAACTCGAAGACGGGACTCCGTGGTAAAATAACAATTCAATACAATACA
GCAGTAGCGATGCATGTTGTATTGGTCCGGCCGAGTAGAGAAACACATAC
GGTATACAGTAAGATGGCAGTATGGTACAGTGACAAAAGTTAAAAACCTC
CTGTTTTTTTCAGGCCGAGAAGCCAGACGACTGGGACGATGAGGAGGACG
GCGAGTGGGAGCCGGCCATGATCAAGAACCCCGAGTACAAGGGCAAGTGG
AAGCCGAAGATGATCGCCAACCCTGACTACAAGGGCTCGTGGGAGCACCC
GATGGTGCCGAACCCGGACTACAAGGCGGACCCCAAACTCGGCCAGAGGT
GCACGGCCTGCACGCACGTCGGGTTCGAGCTCTGGCAGGTACGTGTTTGT
TGTTACATACTGAAACCGGCTGACAGCCCCGTTGTTACCTCAAGCTCGCT
CGGCCAGAGGTGCACGGCCTGCACGCGCGTCGGGCTCGACGAGCTTTCGC
AGTTGTTGTTAATTACGCGGACAGATGAAGGTACCGAGTGGAGAGTTTTG
GAACAATTTTTTGACTCGATAAAAACGACAACAACAGGTGACTGCGGGCA
CCATCTTTGACGAGATCTTGGTAACCGACTCCCTGGAGGAAGCCCAGAAG
TTTGCGGAGGGCACGTGGGCCGCCAAGAAGGACAAGGAGAAGGAGGCCCA
CGAGGAGCTTCAGAAGAAGCAGAAGGAGGAGAAAGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9633:2340..7276- >mRNA_L-elsbetiae_contig9633.18612.1 ID=mRNA_L-elsbetiae_contig9633.18612.1|Name=mRNA_L-elsbetiae_contig9633.18612.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig9633:2340..7276- (Laminarionema elsbetiae ELsaHSoW15) ATGTTCGGACCTGACAAGTGCGGCACCAGCAACGCGCGAACGCACGTGAT CTTCAACTACCCGGAGAAGGGAGAGGGCGACGACGCCAACCTGCTCGTCA AGAAGGACGTCAAGATGGAGAAAGACCAGGCGTCGCACCTCTACACCTTG CACGTCAAGCCCGACGGAACTTTCGAGATGTTCGGACCTGACAAGTGCGG CACCAGCAACGCGCGAACGCACGTGATCTTCAACTACCCGGAGAAGGGAG AGGGCGACGACGCCAACCTGCTCGTCAAGAAGGACGTCAAGATGGAGAAA GACCAGGCGTCGCACCTCTACACCTTGCACGTCAAGCCCGACGGAACTTT CGAGGTGTTCATCGACCAGGAGAGCGTTCGGGCAGGGTCCCTCGAGGAAG AGTTCGACTTTATCGCTCCCAAGGAGATCAAGGACCCCGACCAGAGCAAA CCGGAGGACTGGGTCGACGAGAAGAAAATCCCTGACCCGGAAGACGTCAA GCCGGAGGGTTACGACGACATCCCCAAGGAGATCCCGGACCCGAAGGTGT TCATCGACCAGGAGAGCGTTCGGGCAGGGTCCCTCGAGGAAGAGTTCGAC TTTATCGCTCCCAAGGAGATCAAGGACCCCGACCAGAGCAAACCGGAGGA CTGGGTCGACGAGAAGAAAATCCCTGACCCGGAAGACGTCAAGCCGGAGG GTTACGACGACATCCCCAAGGAGATCCCGGACCCGAAGGCCGAGAAGCCA GACGACTGGGACGATGAGGAGGACGGCGAGTGGGAGCCGGCCATGATCAA GAACCCCGAGTACAAGGGCAAGTGGAAGCCGAAGATGATCGCCAACCCTG ACTACAAGGGCTCGTGGGAGCACCCGATGGTGCCGAACCCGGACTACAAG GCGGACCCCAAACTCGGCCAGAGGTGCACGGCCTGCACGCACGTCGGGTT CGAGCTCTGGCAGGCCGAGAAGCCAGACGACTGGGACGATGAGGAGGACG GCGAGTGGGAGCCGGCCATGATCAAGAACCCCGAGTACAAGGGCAAGTGG AAGCCGAAGATGATCGCCAACCCTGACTACAAGGGCTCGTGGGAGCACCC GATGGTGCCGAACCCGGACTACAAGGCGGACCCCAAACTCGGCCAGAGGT GCACGGCCTGCACGCACGTCGGGTTCGAGCTCTGGCAGGTGACTGCGGGC ACCATCTTTGACGAGATCTTGGTAACCGACTCCCTGGAGGAAGCCCAGAA GTTTGCGGAGGGCACGTGGGCCGCCAAGAAGGACAAGGAGAAGGAGGCCC ACGAGGAGCTTCAGAAGAAGCAGAAGGAGGAGAAAGAGGTGACTGCGGGC ACCATCTTTGACGAGATCTTGGTAACCGACTCCCTGGAGGAAGCCCAGAA GTTTGCGGAGGGCACGTGGGCCGCCAAGAAGGACAAGGAGAAGGAGGCCC ACGAGGAGCTTCAGAAGAAGCAGAAGGAGGAGAAAGAG back to top
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