mRNA_L-elsbetiae_contig9474.18459.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A6H5JFR0_9PHAE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR0_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.350e-63 Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 2 Query: 230 QELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 +ELNTLQ+LGAAGKLGE EL GTTFTLSNIGSIGGTYASPV+LHPQVCIGALGRMQRVPRFD VDTDKVVA++V PVSWSADHRVVDGGTLARFSNTWKAYLENPALMLAD R Sbjct: 299 EELNTLQRLGAAGKLGEEELAGTTFTLSNIGSIGGTYASPVILHPQVCIGALGRMQRVPRFDAVDTDKVVASKVIPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADTR 411
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: D7FZ94_ECTSI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ94_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.350e-61 Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 2 Query: 230 QELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 +ELNTLQ+LGAAGKLGE EL GTTFTLSNIGSIGGTYASPV+LHPQVCIGALGRMQRVPRFD VDTDKVVA++V PVSWSADHRVVDGGTLARFSNTWKAYLENPALMLAD R Sbjct: 511 EELNTLQRLGAAGKLGEEELAGTTFTLSNIGSIGGTYASPVILHPQVCIGALGRMQRVPRFDAVDTDKVVASKVIPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADTR 623
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A6I9NU16_9TELE (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NU16_9TELE) HSP 1 Score: 150 bits (380), Expect = 8.200e-42 Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F+ QELN LQ LG AG+LG ELTG TFTLSNIGSIGGTYA PV+L P+V IGALG++Q +PRFD +VV A + VSWSADHR++DG T++RFSN WK YLENPA M+ D + Sbjct: 110 FEIAQELNRLQALGTAGQLGTNELTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFDA--GGQVVPAHIMNVSWSADHRIIDGATMSRFSNLWKEYLENPAAMVLDLK 224
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A673AYG5_9TELE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AYG5_9TELE) HSP 1 Score: 154 bits (390), Expect = 4.000e-41 Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F QELN LQ LGAAG+LG A+L+G TFTLSNIGSIGGTYA PV+L P+V IGALG++Q +PRFDP + +VV A + VSWSADHR++DG T+ RFSN WK YLENPA M+ D + Sbjct: 323 FDIAQELNRLQTLGAAGQLGAADLSGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFDP--SGQVVRAHIMAVSWSADHRIIDGATMCRFSNLWKDYLENPARMVLDLK 437
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A484C4P2_PERFV (2-oxoacid_dh domain-containing protein n=2 Tax=Perca flavescens TaxID=8167 RepID=A0A484C4P2_PERFV) HSP 1 Score: 148 bits (374), Expect = 5.820e-41 Identity = 73/117 (62.39%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F QELN LQ LG G+LG +EL+G TFTLSNIGSIGGTYA PV+L P+V IGALG++Q +PRFD + VV A + VSWSADHR++DG T+ RFSN W+ YLENPA ML D + Sbjct: 106 FDIAQELNRLQALGVGGQLGTSELSGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFDA--SGSVVPAHIMKVSWSADHRIIDGATMCRFSNLWREYLENPASMLLDLK 220
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: UPI00146D1070 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146D1070) HSP 1 Score: 150 bits (380), Expect = 7.200e-41 Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F+ QELN LQ LG AG+LG ELTG TFTLSNIGSIGGTYA PV+L P+V IGALG++Q +PRFD +VV A + VSWSADHR++DG T++RFSN WK YLENPA M+ D + Sbjct: 192 FEIAQELNRLQALGTAGQLGTNELTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFDA--GGQVVPAHIMNVSWSADHRIIDGATMSRFSNLWKEYLENPATMVLDLK 306
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: Q4TI95_TETNG ((spotted green pufferfish) hypothetical protein n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4TI95_TETNG) HSP 1 Score: 145 bits (367), Expect = 7.580e-41 Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGS----IGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F+ QELN LQ LGAAG+LG A+L+G TFTLSNIGS IGGTYA PV+L P+V IGALG++Q +PRFD +VV A + VSWSADHR++DG T+ RFSN WK YLENPA M+ D + Sbjct: 29 FQLAQELNRLQALGAAGQLGSADLSGGTFTLSNIGSVRAGIGGTYAKPVILPPEVAIGALGKIQILPRFDA--GGQVVRAHIMNVSWSADHRIIDGATMCRFSNLWKEYLENPASMVLDLK 147
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A673AYZ1_9TELE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=6 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AYZ1_9TELE) HSP 1 Score: 154 bits (390), Expect = 8.800e-41 Identity = 76/117 (64.96%), Postives = 92/117 (78.63%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F QELN LQ LGAAG+LG A+L+G TFTLSNIGSIGGTYA PV+L P+V IGALG++Q +PRFDP + +VV A + VSWSADHR++DG T+ RFSN WK YLENPA M+ D + Sbjct: 369 FDIAQELNRLQTLGAAGQLGAADLSGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFDP--SGQVVRAHIMAVSWSADHRIIDGATMCRFSNLWKDYLENPARMVLDLK 483
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A0S7K361_9TELE (ODB2 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7K361_9TELE) HSP 1 Score: 150 bits (378), Expect = 1.650e-40 Identity = 75/117 (64.10%), Postives = 90/117 (76.92%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F+ QEL LQ LGAAG+LG AEL+G TFTLSNIGSIGGTYA PV+L P+V IGALG++Q +PRF P +V AA + VSWSADHR++DG T+ RFSN W+ YLENPA ML D + Sbjct: 198 FQVAQELTRLQTLGAAGQLGTAELSGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGKIQVLPRFGP--DGQVKAAHIMKVSWSADHRLIDGATMCRFSNLWREYLENPASMLLDLK 312
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Match: A0A8B6ZJS8_ORYAF (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial n=2 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B6ZJS8_ORYAF) HSP 1 Score: 149 bits (377), Expect = 1.780e-40 Identity = 74/117 (63.25%), Postives = 92/117 (78.63%), Query Frame = 2 Query: 218 FKHPQELNTLQKLGAAGKLGEAELTGTTFTLSNIGSIGGTYASPVLLHPQVCIGALGRMQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENPALMLADAR 568 F+ ELN LQ+LG+AG+LG AELTG TFTLSNIGSIGGTYA PV+L P+V IGALG ++ +PRF+ +V A++ VSWSADHRV+DG T++RFSN WK+YLENPA ML D + Sbjct: 187 FEIATELNRLQELGSAGQLGTAELTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGSIKSLPRFN--QKGEVYKAQIMNVSWSADHRVIDGATVSRFSNLWKSYLENPAFMLLDLK 301 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9474.18459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9474.18459.1 >prot_L-elsbetiae_contig9474.18459.1 ID=prot_L-elsbetiae_contig9474.18459.1|Name=mRNA_L-elsbetiae_contig9474.18459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp MQRVPRFDPVDTDKVVAARVFPVSWSADHRVVDGGTLARFSNTWKAYLENback to top mRNA from alignment at L-elsbetiae_contig9474:963..2392- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9474.18459.1 ID=mRNA_L-elsbetiae_contig9474.18459.1|Name=mRNA_L-elsbetiae_contig9474.18459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1430bp|location=Sequence derived from alignment at L-elsbetiae_contig9474:963..2392- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9474:963..2392- >mRNA_L-elsbetiae_contig9474.18459.1 ID=mRNA_L-elsbetiae_contig9474.18459.1|Name=mRNA_L-elsbetiae_contig9474.18459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=360bp|location=Sequence derived from alignment at L-elsbetiae_contig9474:963..2392- (Laminarionema elsbetiae ELsaHSoW15)back to top |