mRNA_L-elsbetiae_contig9468.18454.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9468.18454.1
Unique NamemRNA_L-elsbetiae_contig9468.18454.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 615 bits (1586), Expect = 3.170e-204
Identity = 306/483 (63.35%), Postives = 364/483 (75.36%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEPEPRFRRGKSFSSSYRKREIVVAPAADGAEEALDD 1450
            E L +E G+WRA+ +SE VF CYN+DACLGG TG AGYCL GYEGPYCAVCSDGY  +  FACTRC G A  I LAA +               MSG     R G+V R+ ++IPLQS+KIVIV+WQILTQFTSVANVT+PDVY+  LDGLDVFNFDL W+LSAGCI  +DFH RLL STV P+  LLFLAGTYAAA  ++RG +A++L+ +W++HVS+VLLLTF +Y+SVS+TLF+AF CE L+DG +YLRADY ++CDS +H+AFQ YAG M+V+Y  GIPA Y  LLFRDR VL  H ADR  TAR TSTSDLW PY+P VFYYEV+ECGRR+LL GVVVFI+PNTA Q+AITL+MAF F M+SEGL P+AS+WD W+NR GH VVFVS+Y+ALLLKVDVS ERAGSQ+V+E  LVA H CMILAV+ E  V+TW+LKVE   +EP  RFR GK F S              G E A DD
Sbjct:  798 EDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRG-KAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQ-RQEPTTRFRHGKLFRSGR------------GLESAQDD 1266          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 585 bits (1509), Expect = 2.210e-195
Identity = 293/461 (63.56%), Postives = 344/461 (74.62%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATR-IHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEP-EPRFRRGKSF 1378
            + L +EPG+WRAT +SENV ECYNADACLGG TG+  YCL GYEGPYCAVCS GY  + G AC++C   A  I L  SV               +SGE  G+ RG+VER  RF+PLQS+KIVIV+WQILTQFTSVAN+ FP VYQ  LD L++FNFDLGW+LSAGC+  VDFH RLL+ST+ PI  LLFLA  YAAA R  HR  E   L+RVW +HVS+VLLLTF VYASVS+ LFQ FACE LDD ++YLRADYR+ECDSP+H AFQ YAG MIVLY  GIPA YG  LFRD DVL R +ADR   AR+  T+DLW PYRP VFYYEV+EC RR+LL GVVVFIYPNTA Q+A+ L++A VFAM+SE L PYASRWDTW+ RMGHAVV VS+YVALLLKVDVS ERA SQ+VFE+ LVA H CM+  V+ E ++   +L VE   ++P    FRRG+  
Sbjct:  519 DALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSE--DLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRRGRGI 977          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 590 bits (1521), Expect = 4.940e-193
Identity = 287/457 (62.80%), Postives = 354/457 (77.46%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEPEPRFRRGK 1372
            ETLS++PG+WRAT++S+ +  CYNADACLGG TGTAGYCL  YEGPYC++CSDGYA   G++C++C   + GIV A  +              +MSGE   +R  ++ER+  ++PLQS+KIVIVSWQILTQF S ANV +P VYQ  LDGL VF FDLGW++SAGC++ + FHGRLL +T+GPI A+L LAGTYAAATRI+R    + LR +WD+HV + LLLTF VY+SVSSTLF+ FAC+ L+DG++YLR DYR+ECDS +H+ FQ YAG MI+LY  GIP  Y  LLF+DR+VL + +ADR D+ARV STS+LW PY+P VFYYEV+ECGRRILLTG+VVFIYPNTA QLAITL+MAF FA+LSE ++PY+SRW+TW+NRMGH VV VS+YVALLLKVDVS ERA SQ VFEA LV VH CMIL+VV E  V+   L    L E+   RFRRGK
Sbjct:  969 ETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREAN-EKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWTRRLREDLPARFRRGK 1423          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 594 bits (1532), Expect = 1.350e-189
Identity = 304/483 (62.94%), Postives = 360/483 (74.53%), Query Frame = 2
Query:    8 LSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEPEPRFRRGKSFSSSYRKREIVVAPAADGAEEALDDFG 1456
            L ++ GFWRAT  + +V  CYNA+ACL G T ++G CL GYEGPYC++CSDGY     F C+ C  +A GI+LA+ +              V+S +     RG VER+ R+IPLQS KIV+VSWQILTQFT+VANVT+PDVYQ  LDGL VFNFDL W+LSAGCIV VDFH RLL+ST+GPI ALLFL  TYAAATRI+RG   +TL+ +W+RHVSMVLLLT FVY+SVSSTLFQ FACESL DG  YLRADYR+ CDS +H+A Q YAGVM+V+Y  GIPA YG LLFRDRDVL R  ADR +TARV STS+LW PY+P VFYYEV+ECGRR+LL GVVVFIYPNTA Q+AITL+MAF F ++SEGL PYASRWDTW++RMGHAVVFVS+YVALLLKVDVS ER  SQ+VFE  LVA H CMIL +V E VV+T AL V    E   P  R  K+    +R R+  +  + D +E  L   G
Sbjct: 1611 LRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGAT-ETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVG---ERDGPALRFWKAL---FRSRQETIPSSDDVSEVELSPIG 2086          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 1.070e-188
Identity = 297/493 (60.24%), Postives = 361/493 (73.23%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVL-GRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVE-----HLEEEPEPRFRR-GKSFSSSYRKREIVVAPAADGAEEALDDFGG 1459
            ETLS++ G+WRAT +   V  CY+ADACLGG TGT+GYCL GYEGPYCA+CS+GY+ Q  F C  C   A GI LAA++              V SGER GK RG+VERV R+IPLQS+KIV+V+WQI+TQFT+VANVT+P VYQ  L+GL+VFNFDL W+LSAGC+V VDFH RLL++T+GPI A L L  TYAAA RIHRG   +TL  V  +HV MVLLLTFFVY+SVS+TLF+ FACE+L+DG+ YL ADYR+ECDS +H+ F+ YAG M++LY AGIPA Y  LLFRDRDVL GR  A +   +R TSTSDLW PY+P VFYYEVVEC RR+LL GVVVFIYPN++ Q+AITLI+AF F ++SEGL PYASRWDTWINRMGH VV  S+Y+ALLLKVDVS ER+ SQ VFEA LV  H  M++  VAE +V+  AL+ E     HL+E+  PRFR  GK+ +    K      P  D +     +  G
Sbjct: 1153 ETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGAT-ETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSSGKAKAMQTHKWNAGTMPEPDNSRSGAPERRG 1644          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 578 bits (1491), Expect = 5.050e-188
Identity = 283/457 (61.93%), Postives = 351/457 (76.81%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEPEPRFRRGK 1372
            ETL ++PG+WRAT++S+ +  CYNADACLGG TGTAGYCL  YEGPYC++CS+GYA   G++C++C   + GI  A  +              +MSGE   +R  + ER+  ++PLQS+KIVIVSWQI+TQF S ANV +P VYQ  +DGL VF FDLGW+LS GC++ +DFHGRLL +T+GPI A+L LAGTYAAATRI+R    + LR +WD+HV + LLLTF VY+SVSSTLF+ FAC+ L+DG +YLR DYR+ECDS +H+ FQ YAG MI+LY  GIP  Y  LLFRDR+VL + +ADR D+ARV STS+LW PY+P VFYYEV+ECGRR+LLTG++VFIYPNTA QLAITL+MAF FA+LSE ++PY+SRW+TW+NRMGH VV VSVYVALLLKVDVS ERA SQ VFEA LV VH CMIL+VV E  V+   L  + L E+   RFRRGK
Sbjct: 1029 ETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREAN-EKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWRQKLREDVPARFRRGK 1482          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 562 bits (1449), Expect = 2.090e-186
Identity = 285/484 (58.88%), Postives = 351/484 (72.52%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEPEPRFRRGKSFSSSYR-KREIVVAPAADGAEEALDD 1450
            ETLS++PG+WRAT +S  V  CYN DAC+GG TG   YC+ GYEGPYCA+CSD Y+ Q GF C++C   A GI+LA ++              V           +   + R++PLQ+LKI++V+WQI+TQFTS ANVT+PDVYQ  L+GLDVFNFD+ W+LSAGC++ +DFH RLLLST+GPI ALLFLA TY A +RI+RG  A TL+ VWDRHVSMVLLL F VY+ VSS +FQ FAC+ L+ G  YLRADYR+ECDS +H+ F+ YAG MI+LY  GIPAFYGALL RDRDVL +    R D  RV S S+LW PYRP V+YYEV+ECGRRILLTG+VVFIYPNTA Q+AITLIM  VFA+LSE L PYA  WDTW++R+ HAVVF+SVYVALLLKVDVS E+  SQKVFEA LVA H CMILAVV E +++    +V+  ++EP PR   G S +  +    E+ V  A + + E  DD
Sbjct:  559 ETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAA-TLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKE-QDEPAPRVG-GDSVTMRFSYTNEMKVGCAGNSSAEDDDD 1039          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 574 bits (1479), Expect = 4.830e-186
Identity = 292/463 (63.07%), Postives = 352/463 (76.03%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCL-GTASGIVLAASVXXXXXXXXXXXXXXVMSGERA-GKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLE-EEPEPRFRRGKSFS 1381
            +TLS++ GFWRA+ +S  V  CY+ADACLGG TG +GYC  GYEGPYC +CSDGY  Q  FAC++C   +A GI +A  +              V SGE   G++ G+VE V+R+IPLQSLKIVIVSWQILTQFTSVANVT+PDVYQ LLD LDVFNFDL W+LSAGC+V ++FHGRLL+ST+ PI ALL LA TYAAA RI+RG E + L  +W++HV++VLLLTFFVY+SVSSTLF+AFAC+ LD  + YLRADY +EC+S  HR  Q YAG MIV+Y  GIPA Y  LLF+ RDVL     DR +  RV S S+LW PY+P VFYYEV+EC RR+LL GVVVFIYPNTA Q+A+TL++AF FA+LSEGL PYASRWDTWI+R+GH VVF+S+YVALLLKVDVS ERA SQ+VFE+ LVAVH CMIL V+ EA V  W+L+ E        PRFR GKS +
Sbjct: 1052 QTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRG-EPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSLT 1513          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 1.200e-174
Identity = 256/401 (63.84%), Postives = 315/401 (78.55%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCLGTASGIVLAASVXXXXXXXXXXXXXXVMSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLG-RHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLK 1201
            E LS++ G+WRAT  SE V  CY+ +ACLGG TGTAGYCL GY+GPYCAVCS G++ Q GF C  C  +A GIVLA ++              V SG+R G+ +G+VERV+ +IPLQS+KIV+V+WQ++TQFT VAN+T+PDVYQ  LDGL +FNFDLGWILSAGC+  VDFH RLL+ST+GPI A++ LA TYAAATRIHRG    TL+ VWD+HV +VLLL+FFVY+SVSSTLF+ FACE+L DG++YLRADYR+ECDS RH+ F+ YAG+M+++Y  GIP  YG LL+RDRD L  R        +RVTSTSDLW PYRP VFYYEV+ECGRR+LL GVVVFIYPN+  Q+AITL++AFVF ++SE L+PYASRWDTWI+R GH VV  S+YVALLLK
Sbjct:  962 EALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362          
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 515 bits (1327), Expect = 3.520e-166
Identity = 281/492 (57.11%), Postives = 339/492 (68.90%), Query Frame = 2
Query:    2 ETLSLEPGFWRATAASENVFECYNADACLGGTTGTAGYCLGGYEGPYCAVCSDGYAPQPGFACTRCL-GTASGIVLAASVXXXXXXXXXXXXXXVMS-GERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVYQVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTYAAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESLDDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDRDVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVFIYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVYVALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEHLEEEPEPRFRR-GKSFSSSYRKREIVVAPAADGAEEALDDFGGEEL 1468
            + +S++ G+WRAT+ SE V EC+ ADACLGG TGT+GYCL GYEGPYC++CS GY  Q GF+CT+C    A GIV+    XXXXXXXXXXXX  +MS  +  G   GLVER++R IPLQS+KIVIVSWQILTQFTSVANVT+PDVYQ  LD +DVFNFDL W+ S GCI  +DFH RLL+ST+ P+ AL FLA T AA  R +RG        VW +HVSM LLLTF VY++VSS LFQ+FACE L DG++YLR+DYR+ECDS  H+AFQ YAG MIVLY  GIPA Y  LLFRDRDVL + + +R D  RVTSTS LW PY+P  FYYE+                        A+TL++A  F +LSE L PY+SRWD W +RMGH VV VS+YVALLLKVDVS ERA SQ+VFEA LVAVH CM+  VV E ++++ +L+     E P PR    GKS S       +     +DG EEA DD   E +
Sbjct:  769 QEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPRLSTSGKSLSCM-----LSTMHMSDGEEEAKDDTVDEAI 1231          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9468.18454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI3.170e-20463.35Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI2.210e-19563.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2X5_ECTSI4.940e-19362.80Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G5Y7_ECTSI1.350e-18962.94Polymorphic Outer membrane protein G/I family n=1 ... [more]
D8LSC0_ECTSI1.070e-18860.24Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5K7Z1_9PHAE5.050e-18861.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH1_ECTSI2.090e-18658.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE4.830e-18663.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LIY0_ECTSI1.200e-17463.84Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FTL7_ECTSI3.520e-16657.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9468contigL-elsbetiae_contig9468:2..3322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score511.5
Seed ortholog evalue3.5e-142
Seed eggNOG ortholog2880.D7G5Y7
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1800
Cds size1197
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9468.18454.1prot_L-elsbetiae_contig9468.18454.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9468 820..3002 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817013.9299862-UTR-L-elsbetiae_contig9468:1..1411622817013.9299862-UTR-L-elsbetiae_contig9468:1..141Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9468 2..141 +
1691683983.1153705-UTR-L-elsbetiae_contig9468:1..1411691683983.1153705-UTR-L-elsbetiae_contig9468:1..141Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9468 2..141 +
1622817013.9420562-UTR-L-elsbetiae_contig9468:676..8191622817013.9420562-UTR-L-elsbetiae_contig9468:676..819Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9468 677..819 +
1691683983.128925-UTR-L-elsbetiae_contig9468:676..8191691683983.128925-UTR-L-elsbetiae_contig9468:676..819Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9468 677..819 +
1622817013.9765677-UTR-L-elsbetiae_contig9468:3002..33221622817013.9765677-UTR-L-elsbetiae_contig9468:3002..3322Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9468 3003..3322 +
1691683983.1557393-UTR-L-elsbetiae_contig9468:3002..33221691683983.1557393-UTR-L-elsbetiae_contig9468:3002..3322Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9468 3003..3322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817013.9533415-CDS-L-elsbetiae_contig9468:819..9301622817013.9533415-CDS-L-elsbetiae_contig9468:819..930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9468 820..930 +
1691683983.137624-CDS-L-elsbetiae_contig9468:819..9301691683983.137624-CDS-L-elsbetiae_contig9468:819..930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9468 820..930 +
1622817013.9660177-CDS-L-elsbetiae_contig9468:1916..30021622817013.9660177-CDS-L-elsbetiae_contig9468:1916..3002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9468 1917..3002 +
1691683983.1466074-CDS-L-elsbetiae_contig9468:1916..30021691683983.1466074-CDS-L-elsbetiae_contig9468:1916..3002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9468 1917..3002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9468.18454.1

>prot_L-elsbetiae_contig9468.18454.1 ID=prot_L-elsbetiae_contig9468.18454.1|Name=mRNA_L-elsbetiae_contig9468.18454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=399bp
MSGERAGKRRGLVERVSRFIPLQSLKIVIVSWQILTQFTSVANVTFPDVY
QVLLDGLDVFNFDLGWILSAGCIVAVDFHGRLLLSTVGPIAALLFLAGTY
AAATRIHRGGEAQTLRRVWDRHVSMVLLLTFFVYASVSSTLFQAFACESL
DDGRHYLRADYRVECDSPRHRAFQAYAGVMIVLYAAGIPAFYGALLFRDR
DVLGRHQADRVDTARVTSTSDLWSPYRPEVFYYEVVECGRRILLTGVVVF
IYPNTAGQLAITLIMAFVFAMLSEGLTPYASRWDTWINRMGHAVVFVSVY
VALLLKVDVSAERAGSQKVFEAFLVAVHGCMILAVVAEAVVITWALKVEH
LEEEPEPRFRRGKSFSSSYRKREIVVAPAADGAEEALDDFGGEELAPF*
back to top

mRNA from alignment at L-elsbetiae_contig9468:2..3322+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9468.18454.1 ID=mRNA_L-elsbetiae_contig9468.18454.1|Name=mRNA_L-elsbetiae_contig9468.18454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3321bp|location=Sequence derived from alignment at L-elsbetiae_contig9468:2..3322+ (Laminarionema elsbetiae ELsaHSoW15)
CGAAACACTCTCGCTCGAGCCGGGATTTTGGCGAGCAACGGCGGCTAGCG AAAACGTATTCGAGTGCTACAATGCGGACGCCTGCCTCGGGGGCACGACG GGGACAGCCGGCTACTGCCTCGGGGGCTACGAAGGGCCATGTAAGTGATG GGGGGGGGGGGGCATGCTTGCGTCATGATCTGCGCCCGCCCCCTCTGGCC GTGAGGGGCGTGTGATCGTGCGATATTTTACAAGCTTTACTCGTCATTGA ACGGGTTTGTTTCGTGTTGCGCCGGCGGCGGGATGATATTCTTGTAACGT GCGTCTGCCTGTGCGTGCGCCCAGCGTTTGGCATGCGTGCCCCTCGTCTA CACAAACATGCATGGTAGTATGTATTTATTTTTTTAATCAACGACCGCCA CAAAATGCTACAATATATATATGTAGTGTATGTAAAGTATGTCATAGTAG ACCGGCTTAGTTAACTTCAATAACAGGATGGCCCTCAGAGCTCTGGGCCT GTTGGGCTCAGGGCTGCTGCAGGTTCGCCTGGTCCAATGCGCTCGCTTTC AACCTCGCGGTCGACGAAGGGGTGCCGAAATACCGCTCGCGAAAATAGCT ACCATAACGTCCCCCCTGAGCATTAACTTCCTATTCCCACGCTGCTTCGG GATGATGACGACCGCTTCGCGGCAGATTGCGCCGTTTGCAGCGACGGGTA CGCGCCGCAGCCGGGCTTCGCCTGCACCAGGTGCCTGGGCACCGCGAGCG GCATAGTTCTTGCGGCCTCTGTTCTCGCGGCGGTCTTGCTCGCTGCCGTC GTGGTCGCGTCGTACGTGATGTCGGGCGAGCGCGCGGGCAAGCGACGGGG GCTGGTCGAGCGTGTGTCGCGGTTCATCCCTCTTCAGTCCTTGAAGATCG TCATCGTGTCGTGGCAAATCTTGACGCAGGTATGTATGTATGTGTGTACG TGAGAGCTGGATCGGCCGAGGGTGGGATGCGCTGGGCCACACACCGCAGT GGGATGGAGAACGGTGAACTTTCGTTGGTAGCTTTCACCTCCAAGTTCCT CTGGAATGCAAAATGTCGGCCTTTGGCATGAATGTGATGGTGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGTACATATAATATGAAGTTT TCTGCGCCGTGTTCGATGGACGACTGGCGGCTGTTGCGGGCATGGAAAGT ACGACATCAGAAGCTTTGGGCAGATGCAAATGGATGCAGTTCTCGCTGCC CCACAAGATTATGGTGCAACAGGTTCTTTTTGAGTCGATGAGTCGATGGC ACGGGTCTGTAGAAGCCGTGTTTCGCTGCACATGGATGATGTAGAATGGA AGAAACGGCCGAGCCGAGGGGAAAGTTGCCCCCCCCAACTCAGTCCGCAA CCCCCTCATGCAGTCCGCAGCAGCTTGTCCCCCATCATACCTGTTTGTGT GCTGGTGCGAGGCCTAGGTTAACTCGCTGCGGACTGTTGTCGGAGGCGCC CCAGTAGTAGAAACGTGCTCTTGTATTACGTGACAGAGTGGTCTGCCCCA GGGAGAAACGGGTCCCCGTGACATACAGATGATCATACCACTACACCACC TGCGTATCCCCCATATCCAAGACCTGGAACAGCATCTTTCCCCAAGTACC ACAAACAACACCAGACCATTCCCATACATAATGCCCCCCCATCATCACAC CAAACAACCCCATGTATAGTGTCTCCCATCACACAAAACACCCCGAAATA GAAATAAACATAGTACATATGGGGGTGTTACGGCGGTGTGATGGGGGTAC ACAAAAAAGCCTCCACACTTGGCAAAAAAAGTGTCGTATAAGCGGGGCCG ATGGTTCGATGAATGCTCGTCGTGCGTCCACACTGCCTCTGCCTGTCGCT CGTTTCCGCTCGCAGTTCACCTCCGTCGCCAACGTCACTTTTCCGGACGT GTACCAAGTGCTGCTGGACGGCCTGGACGTGTTCAACTTCGACCTGGGCT GGATACTCTCGGCCGGCTGCATCGTCGCGGTCGACTTCCACGGCCGGCTG CTGCTGTCCACCGTCGGCCCGATCGCCGCCCTGCTGTTCCTCGCCGGGAC GTACGCGGCGGCGACCCGCATCCACCGCGGGGGCGAGGCCCAGACGCTGC GGCGCGTCTGGGACAGGCACGTGTCGATGGTGCTCCTGCTGACCTTCTTC GTGTACGCGAGCGTCAGCTCGACGCTGTTCCAGGCCTTCGCGTGCGAGAG CCTCGACGACGGGAGGCACTACCTGCGCGCGGACTACCGCGTCGAGTGCG ACTCCCCCAGGCACAGGGCGTTCCAGGCCTACGCCGGAGTCATGATCGTC CTCTACGCGGCGGGGATCCCCGCCTTCTACGGCGCCCTGCTGTTCAGGGA CCGCGACGTCCTGGGGCGCCACCAGGCCGACCGGGTGGACACCGCTCGGG TGACCTCGACCTCTGACCTGTGGAGCCCGTACAGGCCCGAGGTTTTCTAC TACGAGGTGGTCGAGTGCGGCCGGCGCATCCTGCTCACCGGCGTGGTGGT CTTCATCTACCCCAACACGGCGGGCCAGCTCGCCATCACCCTCATAATGG CGTTCGTCTTCGCGATGCTCTCTGAGGGGCTGACCCCGTACGCGTCCAGG TGGGACACCTGGATCAACCGCATGGGCCACGCGGTCGTGTTCGTGAGCGT GTACGTCGCGCTCCTGCTCAAGGTGGACGTGTCCGCCGAGCGGGCCGGCA GCCAGAAGGTCTTCGAGGCCTTCCTCGTCGCCGTCCACGGGTGTATGATA CTGGCGGTGGTAGCCGAGGCGGTCGTGATCACGTGGGCGCTCAAGGTGGA GCATCTGGAAGAAGAGCCGGAGCCCAGGTTTCGCCGCGGCAAGTCGTTCT CCTCGTCGTACCGGAAGAGGGAGATCGTCGTCGCTCCCGCCGCCGACGGT GCCGAGGAAGCCTTGGATGACTTCGGCGGGGAGGAACTAGCCCCTTTTTA ATGAATGTATCATTTTACAAATAAATGTCAGCAGCCTACGTCCGGTCTGC GAAAATGTCGTTCCAGAGGGAGGGGAGGGACTGTGTAGACTAGGCATGCT ATTAGTTATACCCTTTTTGACGAATTAAGAAGCCCGCAGGAAAAAGGGGG CCAGGGGTGTAGACTACACAGAGGGGACGTTCCCACTACAATAATAGTGG TTCCAGGATTGGTCTCAGATCACCACCAAGTTCCAACACAACTCTTCCAT TCATTCCCTTCACCCCTGAGAATAGCGAGTTGTGCGAGCTTTCAATTGAA GATATTTTGCTGCTGCTGCTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9468:2..3322+

>mRNA_L-elsbetiae_contig9468.18454.1 ID=mRNA_L-elsbetiae_contig9468.18454.1|Name=mRNA_L-elsbetiae_contig9468.18454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2394bp|location=Sequence derived from alignment at L-elsbetiae_contig9468:2..3322+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGGCGAGCGCGCGGGCAAGCGACGGGGGCTGGTCGAGCGTGTGTC
GCGGTTCATCCCTCTTCAGTCCTTGAAGATCGTCATCGTGTCGTGGCAAA
TCTTGACGCAGATGTCGGGCGAGCGCGCGGGCAAGCGACGGGGGCTGGTC
GAGCGTGTGTCGCGGTTCATCCCTCTTCAGTCCTTGAAGATCGTCATCGT
GTCGTGGCAAATCTTGACGCAGTTCACCTCCGTCGCCAACGTCACTTTTC
CGGACGTGTACCAAGTGCTGCTGGACGGCCTGGACGTGTTCAACTTCGAC
CTGGGCTGGATACTCTCGGCCGGCTGCATCGTCGCGGTCGACTTCCACGG
CCGGCTGCTGCTGTCCACCGTCGGCCCGATCGCCGCCCTGCTGTTCCTCG
CCGGGACGTACGCGGCGGCGACCCGCATCCACCGCGGGGGCGAGGCCCAG
ACGCTGCGGCGCGTCTGGGACAGGCACGTGTCGATGGTGCTCCTGCTGAC
CTTCTTCGTGTACGCGAGCGTCAGCTCGACGCTGTTCCAGGCCTTCGCGT
GCGAGAGCCTCGACGACGGGAGGCACTACCTGCGCGCGGACTACCGCGTC
GAGTGCGACTCCCCCAGGCACAGGGCGTTCCAGGCCTACGCCGGAGTCAT
GATCGTCCTCTACGCGGCGGGGATCCCCGCCTTCTACGGCGCCCTGCTGT
TCAGGGACCGCGACGTCCTGGGGCGCCACCAGGCCGACCGGGTGGACACC
GCTCGGGTGACCTCGACCTCTGACCTGTGGAGCCCGTACAGGCCCGAGGT
TTTCTACTACGAGGTGGTCGAGTGCGGCCGGCGCATCCTGCTCACCGGCG
TGGTGGTCTTCATCTACCCCAACACGGCGGGCCAGCTCGCCATCACCCTC
ATAATGGCGTTCGTCTTCGCGATGCTCTCTGAGGGGCTGACCCCGTACGC
GTCCAGGTGGGACACCTGGATCAACCGCATGGGCCACGCGGTCGTGTTCG
TGAGCGTGTACGTCGCGCTCCTGCTCAAGGTGGACGTGTCCGCCGAGCGG
GCCGGCAGCCAGAAGGTCTTCGAGGCCTTCCTCGTCGCCGTCCACGGGTG
TATGATACTGGCGGTGGTAGCCGAGGCGGTCGTGATCACGTGGGCGCTCA
AGGTGGAGCATCTGGAAGAAGAGCCGGAGCCCAGGTTTCGCCGCGGCAAG
TCGTTCTCCTCGTCGTACCGGAAGAGGGAGATCGTCGTCGCTCCCGCCGC
CGACGGTGCCGAGGAAGCCTTGGATGACTTCGGCGGGGAGGAACTAGCCC
CTTTTTAATTCACCTCCGTCGCCAACGTCACTTTTCCGGACGTGTACCAA
GTGCTGCTGGACGGCCTGGACGTGTTCAACTTCGACCTGGGCTGGATACT
CTCGGCCGGCTGCATCGTCGCGGTCGACTTCCACGGCCGGCTGCTGCTGT
CCACCGTCGGCCCGATCGCCGCCCTGCTGTTCCTCGCCGGGACGTACGCG
GCGGCGACCCGCATCCACCGCGGGGGCGAGGCCCAGACGCTGCGGCGCGT
CTGGGACAGGCACGTGTCGATGGTGCTCCTGCTGACCTTCTTCGTGTACG
CGAGCGTCAGCTCGACGCTGTTCCAGGCCTTCGCGTGCGAGAGCCTCGAC
GACGGGAGGCACTACCTGCGCGCGGACTACCGCGTCGAGTGCGACTCCCC
CAGGCACAGGGCGTTCCAGGCCTACGCCGGAGTCATGATCGTCCTCTACG
CGGCGGGGATCCCCGCCTTCTACGGCGCCCTGCTGTTCAGGGACCGCGAC
GTCCTGGGGCGCCACCAGGCCGACCGGGTGGACACCGCTCGGGTGACCTC
GACCTCTGACCTGTGGAGCCCGTACAGGCCCGAGGTTTTCTACTACGAGG
TGGTCGAGTGCGGCCGGCGCATCCTGCTCACCGGCGTGGTGGTCTTCATC
TACCCCAACACGGCGGGCCAGCTCGCCATCACCCTCATAATGGCGTTCGT
CTTCGCGATGCTCTCTGAGGGGCTGACCCCGTACGCGTCCAGGTGGGACA
CCTGGATCAACCGCATGGGCCACGCGGTCGTGTTCGTGAGCGTGTACGTC
GCGCTCCTGCTCAAGGTGGACGTGTCCGCCGAGCGGGCCGGCAGCCAGAA
GGTCTTCGAGGCCTTCCTCGTCGCCGTCCACGGGTGTATGATACTGGCGG
TGGTAGCCGAGGCGGTCGTGATCACGTGGGCGCTCAAGGTGGAGCATCTG
GAAGAAGAGCCGGAGCCCAGGTTTCGCCGCGGCAAGTCGTTCTCCTCGTC
GTACCGGAAGAGGGAGATCGTCGTCGCTCCCGCCGCCGACGGTGCCGAGG
AAGCCTTGGATGACTTCGGCGGGGAGGAACTAGCCCCTTTTTAA
back to top