mRNA_L-elsbetiae_contig9402.18398.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 180 bits (456), Expect = 1.370e-45 Identity = 120/277 (43.32%), Postives = 164/277 (59.21%), Query Frame = 2 Query: 629 RAKANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETG-VEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRP-HPRIVRMLVDAGADTASA-----LPTRVNVADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLW----PKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRKL 1426 RAKAN LL S T +Y PL+ A HG +V RE+I+Q+GI+GC G SGG EALR AA +H++ +A+L++ G V D G AL+ A GR VK LL+ R + AYVN + TP++ A+ + R P+IVR+LVDAGA+T A + R T L F TR +RE +VDGE AT+EQL +L+ R LL R E+V AVSWLW P + + + A++TP+R M P+LRR+ RG+ +TLFR+SRK+ Sbjct: 166 RAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLR---RRQADADAYVN---GTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRKV 436
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 175 bits (444), Expect = 5.500e-44 Identity = 128/273 (46.89%), Postives = 163/273 (59.71%), Query Frame = 2 Query: 632 AKANALLTSRTTPVN-TYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALL-QLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRVNVA----DATALEFATRFIREK-KVDGE-EATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISL-RYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423 AKA+ LLT+ P T+ PLD A +G EVV ELI+Q+GI GC G+SGG AL+ AAQ +++I+ +L GV D G ALV A YG E P+K LL Q + R T + AYVN G TPLL G+ +RP R+VR+LV+AGADT S + R + T L +R+K KV G A+ EQLHKLEAIRRLLLRVE+V AVSWLWP + ++ R AA G + AIST + + V RRRA R + L R+S K Sbjct: 170 AKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGV----TPLLW--GIQHYRP--RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 164 bits (416), Expect = 1.620e-40 Identity = 118/271 (43.54%), Postives = 162/271 (59.78%), Query Frame = 2 Query: 632 AKANALLT-SRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDK-GTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRP-HPRIVRMLVDAGADTASALPTRVN----VADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423 AKAN LLT S + ++ PL+ A + GR VV EL+++ GI+ C G SGG +ALR+AA VDI++ML++ GV D G AL+ A+ G+EA V LL+ +E + YVN+ A + L T LL + +++P +PRI R LVDAGADT SA+ R + T LE+ + + AT+EQL +LEA RR+LLRV +V AVSW+WP L A R AK T + +LPVLRRRA +R L +TLFR+S+K Sbjct: 140 AKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS--YVNI-ARDDDGL--TALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.580e-40 Identity = 115/270 (42.59%), Postives = 155/270 (57.41%), Query Frame = 2 Query: 647 LLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMG-TPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRVNVADA-------TALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYAAEGARKAKAIST---PMRRMLPVLRRRALKRGLSPETLFRFSRK 1423 LL +R + NT+ PLD A +G L V REL+Q+ GI+GCAGAS G +AL AA + H+D++A+L + GV D G ALV + GRE +K LL+ K T T +A G TPLL A+ P R+VR+LVDAGAD A V V D T L+ ATR + EK VD + AT +QL L A RRLLL+VE V A SWLW + AA G ++A+ ST P++ LP++ RR+ +RG + +FR ++K Sbjct: 171 LLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTT-----YASTPRDGRGHTPLLSAVTTGPCSP--RVVRLLVDAGADATLA----VRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCP--AAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 166 bits (420), Expect = 4.740e-40 Identity = 124/275 (45.09%), Postives = 153/275 (55.64%), Query Frame = 2 Query: 629 RAKANALLTSRTTPVNTYT-PLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQL--KERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRVN------VADATALEFATRFIREKKV-DGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423 R AN LL + P NT T PLD A +HG +VVRELIQ+LGI+GC S G AL AA N H+DI+A+L E GV D G AL A G EA VK LL+ KE G AY+N + G L+ PRIVRMLVDAGADT S P +V V + T L F +R+K V DG+ AT+E L +LEAI RLLLRV++V AVSWLWP + A E + + + MLP+L+RR +R TL R+S K Sbjct: 261 RGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLN-----ARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTS--PVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKL--MLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.970e-38 Identity = 100/216 (46.30%), Postives = 133/216 (61.57%), Query Frame = 2 Query: 629 RAKANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMG-TPLLMAI--GLARHRPHPRIVRMLVDAGADTASALPTRVNVAD----ATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRA 1255 RAKAN LLT T T+ PLDTA +G+ EVVRELI+Q+ I+GC GASGG ALRLAA + +VD++++L + GV D G AL+ A EA VK LLQ + + Y M+ L+G TPLL +I G+A R PR+VR+LVDAGADT SA+P + T ++FAT + E G+ A E+ +HKL AI RL +VE+ R+ Sbjct: 171 RAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELY--MYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEAERS 384
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 159 bits (402), Expect = 2.480e-38 Identity = 114/276 (41.30%), Postives = 154/276 (55.80%), Query Frame = 2 Query: 629 RAKANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRP-HPRIVRMLVDAGADTASALPTRVNVAD----ATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYV--ISLRYAAEGARKAKAISTP---MRRMLPVLRRRALKRGLSPETLFRFSRKL 1426 RAKAN LLT R + PLDTA ++GRL VV EL+Q+ GI+GC G +GG AL+LAA H+D++ L GV D G ALV A ++G VK LLQ + AYV+ + TPL+ I + ++ P++VR+LVDAGADT S + + T L AT +R K + +E L +LE IRRLLLRVE+V A SWLW V + L A + ++ ST +R +LP+LRRRA RG +L R++ KL Sbjct: 168 RAKANPLLT-RVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVS---RPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKL 439
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 155 bits (393), Expect = 3.520e-37 Identity = 111/248 (44.76%), Postives = 138/248 (55.65%), Query Frame = 2 Query: 704 RHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASA-LPTRVN---VADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYA---AEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRKL 1426 +HG EVVRELIQQLG++GC G S G E+LRLAA +VDI+ +L GV D G ALV A Y RE VK LLQ +A G T N G TPL+ I A PRI R L+D GADT S L TR + T L FATR +R+ KV G+ ATEEQL L+AI RLL ++E+V AVSWLW + +A A K ++RM VLR KRG+ ++R + +L Sbjct: 189 QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQ--HQAGGGTWYVNNTLDPFGR----TPLVCTIE-ACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEEL 429
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.020e-33 Identity = 102/255 (40.00%), Postives = 143/255 (56.08%), Query Frame = 2 Query: 686 PLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTR----VNVADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISL--RYAAEGARKAKA---ISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423 PLD AV VVR+LIQQLGIQGC GAS G +A R A Q DI+ ML +TG D G L+ A +G EA VK LLQ + + YVN G TP++ IG A PR++R+ +DAGADTAS + V + T L + T +R+++ G ++T+ + LEA+RR+LL++E++RAVSW W +S R +G +AK+ + TP+ LP RR+A R + + R+SRK Sbjct: 349 PLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGR----TPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLP-RRRKARARRVLVMAMSRYSRK 598
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 143 bits (360), Expect = 9.150e-33 Identity = 121/313 (38.66%), Postives = 162/313 (51.76%), Query Frame = 2 Query: 515 MEALIAAGENTDGRLPXXXXXXXXXXXXXXXXXXXXXXRAKANALLTSRT-TPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALL-QLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRV-NVADATALEFATRFIREKKVDGEEA---TEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYA-AEGARKAKAISTPMRR--MLPVLRRRALKRGLSPETLFRFSRKL 1426 + AL+ AG N + R AKA+ LLT + + + PLD A ++G EVV ELI+Q+GI GC G+SGG ALR AA +DI+A+L + GV D G ALV A YG EAP+K LL Q + R + + AY+N +G T LL I R PR+V++LV+AGADT S P + N + + G A T E+ +KLE IRRLLLR E+V AVSWLWP ++ +A A+G + A ST ML + RR ++GL L R+S KL Sbjct: 131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGL----TSLLDGI----QRCRPRVVQLLVEAGADTTS--PVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLA-ALLRYSSKL 432 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9402.18398.1 >prot_L-elsbetiae_contig9402.18398.1 ID=prot_L-elsbetiae_contig9402.18398.1|Name=mRNA_L-elsbetiae_contig9402.18398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp MSAMNGHTDVMEALIAAGENTDGRLPDGRTPLHMCAMEGHLGAVKVLLRAback to top mRNA from alignment at L-elsbetiae_contig9402:2554..7000- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9402.18398.1 ID=mRNA_L-elsbetiae_contig9402.18398.1|Name=mRNA_L-elsbetiae_contig9402.18398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4447bp|location=Sequence derived from alignment at L-elsbetiae_contig9402:2554..7000- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9402:2554..7000- >mRNA_L-elsbetiae_contig9402.18398.1 ID=mRNA_L-elsbetiae_contig9402.18398.1|Name=mRNA_L-elsbetiae_contig9402.18398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig9402:2554..7000- (Laminarionema elsbetiae ELsaHSoW15)back to top |