mRNA_L-elsbetiae_contig9402.18398.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9402.18398.1
Unique NamemRNA_L-elsbetiae_contig9402.18398.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.370e-45
Identity = 120/277 (43.32%), Postives = 164/277 (59.21%), Query Frame = 2
Query:  629 RAKANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETG-VEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRP-HPRIVRMLVDAGADTASA-----LPTRVNVADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLW----PKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRKL 1426
            RAKAN LL S T    +Y PL+ A  HG  +V RE+I+Q+GI+GC G SGG EALR AA  +H++ +A+L++ G V D G AL+ A   GR   VK LL+   R   +  AYVN      +    TP++ A+ +   R   P+IVR+LVDAGA+T  A     +  R      T L F TR +RE +VDGE AT+EQL +L+  R LL R E+V AVSWLW    P  +       +    + A++TP+R M P+LRR+   RG+  +TLFR+SRK+
Sbjct:  166 RAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLR---RRQADADAYVN---GTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRKV 436          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 5.500e-44
Identity = 128/273 (46.89%), Postives = 163/273 (59.71%), Query Frame = 2
Query:  632 AKANALLTSRTTPVN-TYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALL-QLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRVNVA----DATALEFATRFIREK-KVDGE-EATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISL-RYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423
            AKA+ LLT+   P   T+ PLD A  +G  EVV ELI+Q+GI GC G+SGG  AL+ AAQ  +++I+ +L   GV D G ALV A  YG E P+K LL Q + R T +  AYVN     G     TPLL   G+  +RP  R+VR+LV+AGADT S +  R  +       T L      +R+K KV G   A+ EQLHKLEAIRRLLLRVE+V AVSWLWP  + ++ R AA G  +  AIST +   + V RRRA  R +    L R+S K
Sbjct:  170 AKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGV----TPLLW--GIQHYRP--RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.620e-40
Identity = 118/271 (43.54%), Postives = 162/271 (59.78%), Query Frame = 2
Query:  632 AKANALLT-SRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDK-GTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRP-HPRIVRMLVDAGADTASALPTRVN----VADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423
            AKAN LLT S  +   ++ PL+ A + GR  VV EL+++ GI+ C G SGG +ALR+AA    VDI++ML++ GV D  G AL+ A+  G+EA V  LL+ +E     +  YVN+ A   + L  T LL +    +++P +PRI R LVDAGADT SA+  R        + T LE+   +   +      AT+EQL +LEA RR+LLRV +V AVSW+WP     L   A   R AK   T +  +LPVLRRRA +R L  +TLFR+S+K
Sbjct:  140 AKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS--YVNI-ARDDDGL--TALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 2.580e-40
Identity = 115/270 (42.59%), Postives = 155/270 (57.41%), Query Frame = 2
Query:  647 LLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMG-TPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRVNVADA-------TALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYAAEGARKAKAIST---PMRRMLPVLRRRALKRGLSPETLFRFSRK 1423
            LL +R +  NT+ PLD A  +G L V REL+Q+ GI+GCAGAS G +AL  AA + H+D++A+L + GV D G ALV  +  GRE  +K LL+ K   T  T      +A       G TPLL A+      P  R+VR+LVDAGAD   A    V V D        T L+ ATR + EK VD + AT +QL  L A RRLLL+VE V A SWLW  +      AA G ++A+  ST   P++  LP++ RR+ +RG +   +FR ++K
Sbjct:  171 LLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTT-----YASTPRDGRGHTPLLSAVTTGPCSP--RVVRLLVDAGADATLA----VRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCP--AAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 4.740e-40
Identity = 124/275 (45.09%), Postives = 153/275 (55.64%), Query Frame = 2
Query:  629 RAKANALLTSRTTPVNTYT-PLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQL--KERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRVN------VADATALEFATRFIREKKV-DGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423
            R  AN LL   + P NT T PLD A +HG  +VVRELIQ+LGI+GC   S G  AL  AA N H+DI+A+L E GV D G AL  A   G EA VK LL+   KE   G   AY+N        + G   L+          PRIVRMLVDAGADT S  P +V       V + T L F    +R+K V DG+ AT+E L +LEAI RLLLRV++V AVSWLWP     +  A E   +    +  +  MLP+L+RR  +R     TL R+S K
Sbjct:  261 RGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLN-----ARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTS--PVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKL--MLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.970e-38
Identity = 100/216 (46.30%), Postives = 133/216 (61.57%), Query Frame = 2
Query:  629 RAKANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMG-TPLLMAI--GLARHRPHPRIVRMLVDAGADTASALPTRVNVAD----ATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRA 1255
            RAKAN LLT  T    T+ PLDTA  +G+ EVVRELI+Q+ I+GC GASGG  ALRLAA + +VD++++L + GV D G AL+ A     EA VK LLQ +   +     Y  M+      L+G TPLL +I  G+A  R  PR+VR+LVDAGADT SA+P +          T ++FAT  + E    G+ A E+ +HKL AI RL  +VE+ R+
Sbjct:  171 RAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELY--MYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEAERS 384          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 2.480e-38
Identity = 114/276 (41.30%), Postives = 154/276 (55.80%), Query Frame = 2
Query:  629 RAKANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRP-HPRIVRMLVDAGADTASALPTRVNVAD----ATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYV--ISLRYAAEGARKAKAISTP---MRRMLPVLRRRALKRGLSPETLFRFSRKL 1426
            RAKAN LLT R      + PLDTA ++GRL VV EL+Q+ GI+GC G +GG  AL+LAA   H+D++  L   GV D G ALV A ++G    VK LLQ +        AYV+      +    TPL+  I +  ++   P++VR+LVDAGADT S +   +         T L  AT  +R K    +   +E L +LE IRRLLLRVE+V A SWLW   V  + L      A + ++ ST    +R +LP+LRRRA  RG    +L R++ KL
Sbjct:  168 RAKANPLLT-RVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVS---RPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKL 439          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.520e-37
Identity = 111/248 (44.76%), Postives = 138/248 (55.65%), Query Frame = 2
Query:  704 RHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASA-LPTRVN---VADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYA---AEGARKAKAISTPMRRMLPVLRRRALKRGLSPETLFRFSRKL 1426
            +HG  EVVRELIQQLG++GC G S G E+LRLAA   +VDI+ +L   GV D G ALV A  Y RE  VK LLQ   +A G T    N     G     TPL+  I  A     PRI R L+D GADT S  L TR      +  T L FATR +R+ KV G+ ATEEQL  L+AI RLL ++E+V AVSWLW      + +A   A    K       ++RM  VLR    KRG+    ++R + +L
Sbjct:  189 QHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQ--HQAGGGTWYVNNTLDPFGR----TPLVCTIE-ACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEEL 429          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.020e-33
Identity = 102/255 (40.00%), Postives = 143/255 (56.08%), Query Frame = 2
Query:  686 PLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTR----VNVADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISL--RYAAEGARKAKA---ISTPMRRMLPVLRRRALKRGLSPETLFRFSRK 1423
            PLD AV      VVR+LIQQLGIQGC GAS G +A R A Q    DI+ ML +TG  D G  L+ A  +G EA VK LLQ +     +   YVN     G     TP++  IG A     PR++R+ +DAGADTAS +       V +   T L + T  +R+++  G ++T+ +   LEA+RR+LL++E++RAVSW W    +S   R   +G  +AK+   + TP+   LP  RR+A  R +    + R+SRK
Sbjct:  349 PLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGR----TPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLP-RRRKARARRVLVMAMSRYSRK 598          
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 9.150e-33
Identity = 121/313 (38.66%), Postives = 162/313 (51.76%), Query Frame = 2
Query:  515 MEALIAAGENTDGRLPXXXXXXXXXXXXXXXXXXXXXXRAKANALLTSRT-TPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGTEALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALL-QLKERATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGADTASALPTRV-NVADATALEFATRFIREKKVDGEEA---TEEQLHKLEAIRRLLLRVESVRAVSWLWPKYVISLRYA-AEGARKAKAISTPMRR--MLPVLRRRALKRGLSPETLFRFSRKL 1426
            + AL+ AG N + R                         AKA+ LLT  + +    + PLD A ++G  EVV ELI+Q+GI GC G+SGG  ALR AA    +DI+A+L + GV D G ALV A  YG EAP+K LL Q + R + +  AY+N    +G     T LL  I     R  PR+V++LV+AGADT S  P  + N             +    + G  A   T E+ +KLE IRRLLLR E+V AVSWLWP    ++ +A A+G  +  A ST      ML + RR   ++GL    L R+S KL
Sbjct:  131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGL----TSLLDGI----QRCRPRVVQLLVEAGADTTS--PVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLA-ALLRYSSKL 432          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9402.18398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1H7_ECTSI1.370e-4543.32EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KJA9_9PHAE5.500e-4446.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI1.620e-4043.54EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LL76_ECTSI2.580e-4042.59EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI4.740e-4045.09EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JL33_9PHAE1.970e-3846.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI2.480e-3841.30EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1U9_ECTSI3.520e-3744.76EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KSA9_9PHAE1.020e-3340.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE9.150e-3338.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9402contigL-elsbetiae_contig9402:2554..7000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.4
Seed ortholog evalue5.1e-48
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2623
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9402.18398.1prot_L-elsbetiae_contig9402.18398.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9402 3776..4992 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817009.3414264-UTR-L-elsbetiae_contig9402:2553..28321622817009.3414264-UTR-L-elsbetiae_contig9402:2553..2832Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 2554..2832 -
1691683979.7815733-UTR-L-elsbetiae_contig9402:2553..28321691683979.7815733-UTR-L-elsbetiae_contig9402:2553..2832Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 2554..2832 -
1622817009.3531342-UTR-L-elsbetiae_contig9402:2863..37751622817009.3531342-UTR-L-elsbetiae_contig9402:2863..3775Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 2864..3775 -
1691683979.7965705-UTR-L-elsbetiae_contig9402:2863..37751691683979.7965705-UTR-L-elsbetiae_contig9402:2863..3775Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 2864..3775 -
1622817009.387717-UTR-L-elsbetiae_contig9402:4992..51171622817009.387717-UTR-L-elsbetiae_contig9402:4992..5117Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 4993..5117 -
1691683979.832916-UTR-L-elsbetiae_contig9402:4992..51171691683979.832916-UTR-L-elsbetiae_contig9402:4992..5117Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 4993..5117 -
1622817009.3986757-UTR-L-elsbetiae_contig9402:6641..70001622817009.3986757-UTR-L-elsbetiae_contig9402:6641..7000Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 6642..7000 -
1691683979.8456006-UTR-L-elsbetiae_contig9402:6641..70001691683979.8456006-UTR-L-elsbetiae_contig9402:6641..7000Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9402 6642..7000 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817009.364849-CDS-L-elsbetiae_contig9402:3775..37971622817009.364849-CDS-L-elsbetiae_contig9402:3775..3797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9402 3776..3797 -
1691683979.808368-CDS-L-elsbetiae_contig9402:3775..37971691683979.808368-CDS-L-elsbetiae_contig9402:3775..3797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9402 3776..3797 -
1622817009.3761675-CDS-L-elsbetiae_contig9402:4066..49921622817009.3761675-CDS-L-elsbetiae_contig9402:4066..4992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9402 4067..4992 -
1691683979.820739-CDS-L-elsbetiae_contig9402:4066..49921691683979.820739-CDS-L-elsbetiae_contig9402:4066..4992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9402 4067..4992 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9402.18398.1

>prot_L-elsbetiae_contig9402.18398.1 ID=prot_L-elsbetiae_contig9402.18398.1|Name=mRNA_L-elsbetiae_contig9402.18398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
MSAMNGHTDVMEALIAAGENTDGRLPDGRTPLHMCAMEGHLGAVKVLLRA
KANALLTSRTTPVNTYTPLDTAVRHGRLEVVRELIQQLGIQGCAGASGGT
EALRLAAQNDHVDILAMLVETGVEDKGTALVGAIAYGREAPVKALLQLKE
RATGNTRAYVNMFAEIGEQLMGTPLLMAIGLARHRPHPRIVRMLVDAGAD
TASALPTRVNVADATALEFATRFIREKKVDGEEATEEQLHKLEAIRRLLL
RVESVRAVSWLWPKYVISLRYAAEGARKAKAISTPMRRMLPVLRRRALKR
GLSPETLFRFSRKLS*
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mRNA from alignment at L-elsbetiae_contig9402:2554..7000-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9402.18398.1 ID=mRNA_L-elsbetiae_contig9402.18398.1|Name=mRNA_L-elsbetiae_contig9402.18398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4447bp|location=Sequence derived from alignment at L-elsbetiae_contig9402:2554..7000- (Laminarionema elsbetiae ELsaHSoW15)
GGGGCTACAGGCTCGAGCTCGCACTCTCTTCTAATCTCTCGATCTACATA CATCTCACCCCCAGCATCACTGTGCTTCCCACACATCACCATGGATCAAA TCAGTGCTGAATTTATGAAAGCTTTCGGCTGCTCACGATCAGGAGGGAAC AAAGGGCGTACGAACCAACTACATTTGGCGGCCACCGTTGGTTCCCTCCA GGGCGTACGTGAGGCGCTCTCGAGAGGGTCCATAGATATCGACGAAGGCA ATCCAGACGGAGCGTCCCCTTTAATTCTCGCGGCAGAGATGGGTCACACC GATGTAATTGATTATCTCCTGAACGTCGGACGGGCCTACCTTCGGAGTTA CGCATCAAGGTGCGGTTTACCTTGCACATGTGTGGGTGTTTGGTGTTTGG TACAGACATGACAGACATTAGTTCACCTATTTAAACTCGGCGTTCCCGGT TCCTTGATATTTTTTTGGCTGTCCCGGACTTATATTCGGGAATCTCTGCG ATATCCGTGGACTTGTTGCAAACTCCGTTCCTGCATATCTGCAGGCACGG ACGGCCATTATTTGATTATTTGGCTGTTCCTCAGTCACACAATGACGTCG TCTGCGCATGTTATGTATGAGGCATGTGGCCTCACCTTCTTGACGCACAC ACAACCCAGGATGGTCGCATCCAGCGCGCTATCCGGGGCATGCACATTTA TGCACCAAGCTGGTGTATTCCCACAACGTGTGAGCACAGGAGTTAGTTTC AAGTTTCAAATGCTGGTGGCACATGGTCTGTGGATGCTGCGCAAGTAGGG GGTCCTTTAGATTTTTGGACACTCTCTCCCCCGCGGGTAAGGAGAAAATA GGCAGATGAGGTTCAACAGAGGTGATTATCTAGCTAGTTGTTCCCTCTGT AGCACCGCCGTGTGTCAGCCCTGACTGTACTCAAAGCCAACAGAGTCTGC ATAGCAGTAGCAGCAACTTACGAAGTTGAAAAAATATATGAGAGTTATCG TGCAACGCTGAACAAGTCTGTCGTGATAAAAGTGCTCTATCCATTCCGAG TTGCCAGTACGACCTAGTCGCTACTTCGTTACCACAGAGGAGTTATGAGT ATCGCTGCGTAGATAGGTTCACTTGGAGCAAGGCAGAGGGAGGGTGTGTG AGCGCGCTTTTGTGACCCGAGCAAATCGTGGGAGGCGGCCTGAAGAAAGG GAAGTGCTCGCCGCGAGGGTTCTCCCAGTCTCCCGGCTCACGGCCCTCGC TTAAGTGGTACATAGCCACCATTATATTCGTCTTAGTTGGGGTTCATATC GGCAACGGCGCGGCCGTGTGTGTGTCTTTTCAACCTCGAGTCGCGAGCAC GCTGCGCATCACACTATATGTAAAGATCATTCCTAGATAAATTTGTATTC GGCCCCAAGGTGCCCACCTTCAATTTGTCCAGGAGTGGGTTCGTTGGAAT AGCCGGCTAGAAATTTCCTGTCTAAGGTTCGGAAATCTCCGCGGCCTATT TCAAACTCGAAGTTCAACAGTTCCCGATAATCTAGCCGAAATATCCAGGA ATGCCGAGTTTAAAAATAGATAAAATGGTCTCGAGAATATGATGTTACGT AGACTAGACTACTCACTACTTGGAAACAGGGGGGCTCACTTAGAGGGTAA CGCTTGCGTGGTTCCAATGGTAATATGTACAGGAGGTGGTGCCTAGCTTA TTCGGCAACGGTGGCGGATGGCGAATTCTTCTAGTTTTAATTTTCGTTCC TCCATTTTTGTGTGTTTCGCCAAGTTCGGATGATGTGGCCACGCGTGTAG CAGGAAGGCGATCATACCCCCCCCCTCCTAGTTCCAGCACATGACGCCAA CCTTCCGCCTTTCTTTTTCTCCTACATATCAAGGTTGTAACGCCTTGCAC CTTGCAAGCGTGAACGGGCACCTGGCCGCGTGCAAGCTGCTGATCCAGGT CCAGGAAGCCAGGTCGGACCTCGACGAGACGACCGATGACGGCTACACGT GCCTTCACATGAGTGCGATGAACGGACACACGGACGTTATGGAGGCGCTG ATCGCGGCGGGTGAGAATACCGACGGCCGCTTGCCGGACGGAAGAACCCC ATTGCACATGTGTGCGATGGAAGGACACCTGGGCGCGGTCAAAGTGCTCC TCCGTGCGAAAGCAAACGCGTTGTTGACAAGCAGGACCACACCGGTAAAC ACCTATACCCCGTTGGACACGGCGGTCAGGCACGGGCGCTTGGAGGTGGT GCGCGAGCTGATCCAGCAGCTTGGGATACAAGGCTGTGCCGGTGCAAGCG GCGGAACGGAAGCCCTTCGCCTGGCTGCGCAGAACGACCATGTCGACATC TTGGCCATGCTGGTGGAAACCGGTGTGGAAGACAAGGGCACAGCCCTCGT CGGCGCTATCGCGTATGGCCGCGAGGCGCCCGTGAAGGCCCTATTGCAGC TGAAGGAGCGTGCGACTGGTAACACAAGAGCGTACGTGAACATGTTCGCA GAGATCGGCGAACAGCTGATGGGAACACCTTTGCTTATGGCCATTGGTTT GGCCCGCCATCGGCCGCATCCTAGGATCGTGCGCATGCTCGTAGACGCCG GGGCGGACACCGCATCGGCCTTACCAACGCGGGTAAATGTTGCGGACGCC ACCGCTCTGGAATTCGCGACTCGTTTTATCCGCGAGAAGAAAGTGGACGG GGAAGAAGCGACCGAGGAGCAGCTACACAAGCTGGAAGCCATCCGCCGTT TGCTGCTGAGGGTGGAGTCGGTTCGTGCGGTCTCATGGCTGTGGCCAAAA TATGTCATATCCCTCCGTTATGCTGCAGAGGGTGCAAGGAAGGCCAAGGC GATTTCCACTCCGATGAGGAGGATGCTACCGGTTCTGAGGAGAAGGGCTT TAAAACGCGGTTTATCTCCAGAGACCTTGTTCAGGTGTGTGGTATACTGT TGAGGCTAGAGGATCGAACAAGCGCTCTGCATTTTTGGAACTTTTGGGCC ACTTGATGTATAGCTTGTTAGCGCTGAGTTTGACGCCGGAAAATCGGGGG CTTTTGGCCATTGTCTGGGTAGTCACGCTGTCGTCCCTGCACGTTCGGCA CAACAGTTGTCACAGGAGCAGCCGGCGGCGCTCAATCTCGTAGCGACAGT TGACGCCGCTCTCGCTTTACCATCTTGCGCACGTGCGTGCTTTACTTTCC CAGGTTCTCGAGGAAGCTTTCTTGATCGGGCTTTCGTCGGCCTTGTGCTC CACATGCGGTCGTAGCGCAGCGCCTTTTGGGGCTCTTGCAATGCGTAAGC AGCGGCGTTTTCGCTGGGGTTTGCACAGCAGGTTGGTTGCTCTCTGGCGA CCAGCGTTTGTTGTCGACGTTGCTCCTGCGCATGCGTTTTTCGCGGCCTT TTGGGGGTAGCATCCGGAATTGCCGACAGCAGAGCGGAGACTCACCTTCG GATGTTTTGAGGAAGGCTCAACCGCGGTGGTCTGTTCATGAACTGCCTCT TGCTCTCTTCGCGCATCGGTAGTAAGCACTATTTATGTAGAATTTGTGTT GTTTGGGGTGGGCTGTATGGCGGTCAGCGGTGTTGTAGGCTGCGAGCACG CGGTGGCGCCGGTCGTGTTGCTGACAAGTGGGAGACAGGATATGAGACGG CCTCGGCACGGCTGTGCCTACAACATTTGAACGTGCCATTCGAGTGATGA CTTTCTTCCGGTGTGACTTGACGCAGGCGCGCTCGCGGGGGGAGAATGAA GCACCTCCTCCGGCCTGCCTTCTTTAAAGGCGCTCGAGACATGTTTGAAC GGGCAGTGTGTCAGGAAAACTCGTTTAGAGCGTACTGCAGTGGTAGGCCC CATCAGTAGCCAGAGGCGACAGTTCTCCATTGTTTTCGATGTAGGCAACC AAAGAGCGTGTGTGCGCAGGCAGGTATGTATCTGGTATGTATATGTGCGC TGTAACAGAGATGGGCTGAACAGCAATCCGCCTTGCTGTGACAGCAGGAT AGAGCCACGATGGAAGAGGTCAGCGCTCTCTATCCACAGGTACCCAGAGC AGTTGTAGCGTCTTGCACTCGTGAGTACCAGTCCGTTTAAACGATCAGGA TGCAATGTTCAATCAACCATTGAGGTTAGCTGAACAGTCCGACGACGGGA CACCCCAAATCGCTGGTGGTACGCACGATTCGGAGATGTTACGGTCTTTC AGTTTTTTTTTGTTTTCTCTGTAGTGTTTGGTTTTGAGCTGAGACGCAAG CGCGCCTTCGCCCCTTGTGCTCACCGTCTTCACGTGTGTGTGTGTGTGTG TGCGTATCCTTCCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACGT GTACTACACCTTGCGGTGTACTTGGAGGCACTACCCTTTGCAGTGCATTT GTCTGTACAACTAGAACCCACCGGGGTTACACAGGAGGAGGAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9402:2554..7000-

>mRNA_L-elsbetiae_contig9402.18398.1 ID=mRNA_L-elsbetiae_contig9402.18398.1|Name=mRNA_L-elsbetiae_contig9402.18398.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig9402:2554..7000- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGTGCGATGAACGGACACACGGACGTTATGGAGGCGCTGATCGCGGC
GGGTGAGAATACCGACGGCCGCTTGCCGGACGGAAGAACCCCATTGCACA
TGTGTGCGATGGAAGGACACCTGGGCGCGGTCAAAGTGCTCCTCCGTGCG
AAAGCAAACGCGTTGTTGACAAGCAGGACCACACCGGTAAACACCTATAC
CCCGTTGGACACGGCGGTCAGGCACGGGCGCTTGGAGGTGGTGCGCGAGC
TGATCCAGCAGCTTGGGATACAAGGCTGTGCCGGTGCAAGCGGCGGAACG
GAAGCCCTTCGCCTGGCTGCGCAGAACGACCATGTCGACATCTTGGCCAT
GCTGGTGGAAACCGGTGTGGAAGACAAGGGCACAGCCCTCGTCGGCGCTA
TCGCGTATGGCCGCGAGGCGCCCGTGAAGGCCCTATTGCAGCTGAAGGAG
CGTGCGACTGGTAACACAAGAGCGTACGTGAACATGTTCGCAGAGATCGG
CGAACAGCTGATGGGAACACCTTTGCTTATGGCCATTGGTTTGGCCCGCC
ATCGGCCGCATCCTAGGATCGTGCGCATGCTCGTAGACGCCGGGGCGGAC
ACCGCATCGGCCTTACCAACGCGGGTAAATGTTGCGGACGCCACCGCTCT
GGAATTCGCGACTCGTTTTATCCGCGAGAAGAAAGTGGACGGGGAAGAAG
CGACCGAGGAGCAGCTACACAAGCTGGAAGCCATCCGCCGTTTGCTGCTG
AGGGTGGAGTCGGTTCGTGCGGTCTCATGGCTGTGGCCAAAATATGTCAT
ATCCCTCCGTTATGCTGCAGAGGGTGCAAGGAAGGCCAAGGCGATTTCCA
CTCCGATGAGGAGGATGCTACCGGTTCTGAGGAGAAGGGCTTTAAAACGC
GGTTTATCTCCAGAGACCTTGTTCAGATGAGTGCGATGAACGGACACACG
GACGTTATGGAGGCGCTGATCGCGGCGGGTGAGAATACCGACGGCCGCTT
GCCGGACGGAAGAACCCCATTGCACATGTGTGCGATGGAAGGACACCTGG
GCGCGGTCAAAGTGCTCCTCCGTGCGAAAGCAAACGCGTTGTTGACAAGC
AGGACCACACCGGTAAACACCTATACCCCGTTGGACACGGCGGTCAGGCA
CGGGCGCTTGGAGGTGGTGCGCGAGCTGATCCAGCAGCTTGGGATACAAG
GCTGTGCCGGTGCAAGCGGCGGAACGGAAGCCCTTCGCCTGGCTGCGCAG
AACGACCATGTCGACATCTTGGCCATGCTGGTGGAAACCGGTGTGGAAGA
CAAGGGCACAGCCCTCGTCGGCGCTATCGCGTATGGCCGCGAGGCGCCCG
TGAAGGCCCTATTGCAGCTGAAGGAGCGTGCGACTGGTAACACAAGAGCG
TACGTGAACATGTTCGCAGAGATCGGCGAACAGCTGATGGGAACACCTTT
GCTTATGGCCATTGGTTTGGCCCGCCATCGGCCGCATCCTAGGATCGTGC
GCATGCTCGTAGACGCCGGGGCGGACACCGCATCGGCCTTACCAACGCGG
GTAAATGTTGCGGACGCCACCGCTCTGGAATTCGCGACTCGTTTTATCCG
CGAGAAGAAAGTGGACGGGGAAGAAGCGACCGAGGAGCAGCTACACAAGC
TGGAAGCCATCCGCCGTTTGCTGCTGAGGGTGGAGTCGGTTCGTGCGGTC
TCATGGCTGTGGCCAAAATATGTCATATCCCTCCGTTATGCTGCAGAGGG
TGCAAGGAAGGCCAAGGCGATTTCCACTCCGATGAGGAGGATGCTACCGG
TTCTGAGGAGAAGGGCTTTAAAACGCGGTTTATCTCCAGAGACCTTGTTC
AGGTTCTCGAGGAAGCTTTCTTGAGTTCTCGAGGAAGCTTTCTTGA
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