mRNA_L-elsbetiae_contig9372.18372.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9372.18372.1
Unique NamemRNA_L-elsbetiae_contig9372.18372.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: D7FKT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT2_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 2.190e-68
Identity = 271/551 (49.18%), Postives = 308/551 (55.90%), Query Frame = 1 
Query:   13 VHRQINKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQRSRRMSKEKYIAGVVTGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDGDEGELSEGELLRRRASXXXXXXXXXXXXXXXXXXXXXXXGTPC------------ASPQPSNAQLSAPQSXXXXXXXQVSFDRTPKSKTGEQWQAYRGNPLLFFGGAGFCLASAPSSASRGREEGLSSSSRNGAPRQHSRGRSVGAGVLGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGKLVSQLRGIVGGRRGSATSMG--------SGRVGYSLSDDDEEDSYEDEDGDFGPRRGNSGDHAXXXXXXXXXXXXXXXXXXXXXX-------LPRGHXXXXXXXXXRSGSASSLSALLGGPSAGSSHPQ--RSPPGSVSNVRVAADVPLPV--VAGSRLPRAPVAVPLSGSGGGGGVAAGGVASGRGSALSAPKPPAPRNSE 1572
            VHRQINKQVKA+VWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSD ID  NFV+P +Y RSRRMSKEKYIAGV TG  GXXXXXXX              XXXXXXXXX     FV   E  +SE EL      XXXXXXXXXXXXXXXXXXXXXXX                 +   +N ++S PQS            R   +   +   + R  P    G  G+  A APSS  RGRE+    S +        RGRS+      ++                         X             RSG+LVSQLRGIVG  +G +   G        +GR G+SLSDDDEEDS+EDE+ D   ++  +G+  XXXXXXXXXXXX                   RGH              SS +A +G P   +++ +  RSPPGS+SN+R A           GSRLPR P A+PLSGS G G    G  ASGRGSAL   KPPAPRNSE
Sbjct:  120 VHRQINKQVKATVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGIDASNFVIPSDYHRSRRMSKEKYIAGVGTGGEGXXXXXXXRQNMDRGASGNFESXXXXXXXXXGV---FVT--EAGVSERELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRKSLTNGNGSGTNGEMSDPQSP---------LARGQPTSQAQALVSGRTAPASGGGLQGYQPA-APSSDGRGREDPSQRSQQRQQAHAQPRGRSM------SSDSPERRGGPASGTAGGGAAERHVGGXGEAPAHKRQRSKSRSGRLVSQLRGIVGAGKGKSARRGGGSGALVMNGRGGHSLSDDDEEDSFEDEEWDVREQQHTAGNXXXXXXXXXXXXXXGVVTAASRAAQLVEAREASRGHRR-----------VSSATATMGVPIGNNTNLENRRSPPGSMSNLRAAXXXXXXXXXATGSRLPRVPPAMPLSGSRGAG---VGRGASGRGSAL---KPPAPRNSE 632
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: A0A6H5KD68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD68_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 5.170e-60
Identity = 261/553 (47.20%), Postives = 296/553 (53.53%), Query Frame = 1 
Query:   13 VHRQINKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQRSRRMSKEKYIAGVVTGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDGDEGELSEGELLRRRASXXXXXXXXXXXXXXXXXXXXXXXGTPCASP----------QPSNAQLSAPQSXXXXXXX----QVSFDRTPKSKTGEQWQAYRGNPLLFFGGAGFCLASAPSSASRGREEGLSSSSRNGAPRQHSRGRSVGAGVLGANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGKLVSQLRGIVGGRRGSATSMG--------SGRVGYSLSDDDEEDSYEDEDGDFGPRRGNSGDHAXXXXXXXXXXXXXXXXXXXXXXLPRGHXXXXXXXXXRSGS-----ASSLSALLGGPSAGSSHPQ--RSPPGSVSNVRVAADVPLPV----VAGSRLPRAPVAVPLSGSGGGGGVAAGGVASGRGSALSAPKPPAPRNSE 1572
            VHRQINKQVKA+VWMAHDYPLKL+HIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSD ID  NFV+P +YQRSRRMSKEKY+AGV   AGG XXXXXXX               XXXXXXXX    FV   E  +SE         XXXXXXXXXXXXXXXXX      GT  AS             +N ++S PQS           Q S        +G   Q Y+               +APSS  RGRE+    S +     Q  RGRS+      +                                        RSG+LVSQL+GIVG  +G +   G        +GR G+SLSD    DS+EDE+ D   +        X    XXXXXXXXXXXXXXXX +             R  S      SS +A +G P   +++ +  RSPPGS+SN+  A             GSRLPR P A+PLSGS G G    G  ASGRGSAL   KPPAPRNSE
Sbjct: 1380 VHRQINKQVKATVWMAHDYPLKLRHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDGIDASNFVIPSDYQRSRRMSKEKYVAGVR--AGGEXXXXXXXRQNMDRGVSGNFESDXXXXXXXXV---FVT--EAGVSERXXXXXXXXXXXXXXXXXXXXXXXXXGDMSDEGTTLASSPRRRSSLTNGSGTNGEMSDPQSPLARGQPPGQPQASVSARTAPASGGGLQGYQ--------------PAAPSSDGRGREDLSQKSQQRQQHAQPPRGRSM------SRDSPERRGGPASGTEGGGTAERHVGGAGEAPAHQRQRSKSRSGRLVSQLKGIVGAGKGKSARRGGSSGALMMNGRGGHSLSDXXXXDSFEDEEWDVRQQXXXXXXXXXTAGNXXXXXXXXXXXXXXXXGVVTAASRAAQLAEAREASREHRRVSSATATMGAPMGNNTNLENRRSPPGSMSNLGAAXXXXXXXXXXXATGSRLPRVPPAMPLSGSRGAG---VGRGASGRGSAL---KPPAPRNSE 1899
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: F4Q3Y2_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q3Y2_CAVFA)

HSP 1 Score: 73.2 bits (178), Expect = 4.710e-10
Identity = 31/95 (32.63%), Postives = 61/95 (64.21%), Query Frame = 1 
Query:   28 NKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQRSRRM 312
            +K  +  VW+++++P K+  ++P  E+L+  + + +RL   +SL   P EGFPVK+  P++ T+ A VTF N+   +IDP++F +P ++ + + +
Sbjct:  418 HKNFQGCVWISNEFPRKITDLLPIFEVLTPTNKLFSRLSEFISLK-FPMEGFPVKLDFPVVPTITATVTFNNYIEKEIDPQHFEIPVDFIKKKDL 511
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: UPI000644BE56 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644BE56)

HSP 1 Score: 71.6 bits (174), Expect = 1.220e-9
Identity = 31/97 (31.96%), Postives = 59/97 (60.82%), Query Frame = 1 
Query:   28 NKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQRSRRMSK 318
            +K  + +VW++ ++P K+  I+P  E+LS    +  RL   +SL   P +GFPVK  +P++ T+ A VTF N+   ++D   F +P ++ +++++ K
Sbjct:  356 HKNFEGTVWISQEFPRKITDILPIFEVLSPTHKLFGRLSDFISLK-FPSDGFPVKFDIPVLPTITATVTFNNYVEKEVDKCQFELPSDFVKTKQLLK 451
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: D3AYY2_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AYY2_POLPP)

HSP 1 Score: 69.7 bits (169), Expect = 5.640e-9
Identity = 31/97 (31.96%), Postives = 62/97 (63.92%), Query Frame = 1 
Query:   28 NKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENF-RSDDIDPRNFVVPPEYQRSRRMS 315
            +K  + ++W++ ++P K+  ++P  E+L+  + + +RL   +SL   P +GFPVK+  P++ T+ A VTF+N+   +DI P  F VP ++ + +R++
Sbjct:  397 SKNFEGTIWISDEFPRKITDLLPIFEVLTPTNKLFSRLNEFVSLK-FPSDGFPVKLDFPVVPTITATVTFQNYVEREDIKPDLFEVPRDFVKKKRLT 492
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: A0A1R2APQ5_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2APQ5_9CILI)

HSP 1 Score: 68.6 bits (166), Expect = 1.500e-8
Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = 1 
Query:    1 MASQVHRQINKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQE-GFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNF 276
            +AS++ +  NK +KA++W A D+P+K+  +MP L++L+     A R    LS   +    GFP+K  +PLM+TV A+V F+  +++ I+   F
Sbjct:  366 LASKLEKNSNKHIKANLWCAEDFPIKIADLMPLLDLLASVSQKAKRFHEFLSSNQMFYNIGFPLKAKIPLMLTVTALVAFKELKTEGIEDSEF 458
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: A0A6J0KSN1_RAPSA (ankyrin repeat domain-containing protein 13B-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0KSN1_RAPSA)

HSP 1 Score: 67.8 bits (164), Expect = 2.420e-8
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 1 
Query:   31 KQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQRSRRMSKEKYI-AGVVTG 348
            K +  SVW+ +D+PLK + ++P L+IL++  +   R+R +L++   P   FPVK+S+P++ TVKAV+TF  F           +PP  Q    +S  ++I AGV  G
Sbjct:  365 KSLSPSVWLTNDFPLKTEELLPLLDILAINVEAVRRMRELLTVK-FPAGSFPVKLSIPVIPTVKAVMTFSKF---------VALPPMDQFYTPVSSPRHISAGVEDG 461
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: UPI0009E4884D (ankyrin repeat domain-containing protein 13C-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4884D)

HSP 1 Score: 65.1 bits (157), Expect = 7.070e-8
Identity = 35/108 (32.41%), Postives = 62/108 (57.41%), Query Frame = 1 
Query:   19 RQINKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTF---------ENFRSDDIDPRNFVVPPEYQRSRRMS 315
            +++ K +K +VW+  D+PLK + ++P L+IL+ +  +  +LR +L+    P   FPVKVS+P++ TV+ ++TF         E F +    PR+   P E  +S+  S
Sbjct:  130 KEVVKNLKPTVWLTEDFPLKTEELLPMLDILADKIKVVKQLRELLT-TKFPPGTFPVKVSIPIIPTVRMIITFTKYISLQPSEQFFTPLSSPRHLPAPEERDQSKSES 236
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: A0A7S4MEC8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MEC8_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 7.290e-8
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 1 
Query:   28 NKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSD-DIDPRNFVVPPEYQ 297
            +K  KA VW+  D+P+ ++ ++P   ILS       +L+  LS+  +P+EGFPVK+ VP+  T+    TF  F  D  ID   F +PPEY+
Sbjct:  375 SKLHKAKVWITEDFPVTIEDLLPMFAILSPNGKHFEKLKDFLSVP-LPEEGFPVKIEVPVFPTIYGTATFGVFDHDATIDESVFDIPPEYE 464
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BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Match: A0A6V7QDS5_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QDS5_ANACO)

HSP 1 Score: 65.1 bits (157), Expect = 1.530e-7
Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 1 
Query:   19 RQINKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSVLSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQRSRRMSKEK 324
            +++ K ++ +VW+  D+PLK++ IMP L+ILS +     RLR  L+ A  P   FPVK+++P++ TV+ V+TF  +      P  F  P    R     +EK
Sbjct:  274 KEMVKSLRPTVWLTEDFPLKVEEIMPLLDILSSKVKAVRRLREFLT-AKFPPGTFPVKIAIPVVPTVRVVITFTKYVPLQ-QPEQFFTPLSSPRLLSALEEK 373
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9372.18372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKT2_ECTSI2.190e-6849.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD68_9PHAE5.170e-6047.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F4Q3Y2_CAVFA4.710e-1032.63Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
UPI000644BE561.220e-931.96hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3AYY2_POLPP5.640e-931.96Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A1R2APQ5_9CILI1.500e-835.48Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A6J0KSN1_RAPSA2.420e-836.45ankyrin repeat domain-containing protein 13B-like ... [more]
UPI0009E4884D7.070e-832.41ankyrin repeat domain-containing protein 13C-like ... [more]
A0A7S4MEC8_9EUKA7.290e-838.46Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A6V7QDS5_ANACO1.530e-735.29Uncharacterized protein n=1 Tax=Ananas comosus var... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9372contigL-elsbetiae_contig9372:2171..7549 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.2
Seed ortholog evalue1.4e-61
Seed eggNOG ortholog2880.D7FKT2
KEGG koko:K21437
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006621,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0010941,GO:0012505,GO:0019222,GO:0031323,GO:0032507,GO:0033036,GO:0033365,GO:0034613,GO:0035437,GO:0042981,GO:0043067,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0048471,GO:0050789,GO:0050794,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0072595,GO:2000209
EggNOG free text desc.protein retention in ER lumen
EggNOG OGsKOG0522@1,KOG0522@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons6
Model size1575
Cds size1575
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9372.18372.1prot_L-elsbetiae_contig9372.18372.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9372 2171..7549 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817006.8432715-CDS-L-elsbetiae_contig9372:2170..22531622817006.8432715-CDS-L-elsbetiae_contig9372:2170..2253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 2171..2253 -
1691683977.9711463-CDS-L-elsbetiae_contig9372:2170..22531691683977.9711463-CDS-L-elsbetiae_contig9372:2170..2253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 2171..2253 -
1622817006.8542535-CDS-L-elsbetiae_contig9372:2286..30071622817006.8542535-CDS-L-elsbetiae_contig9372:2286..3007Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 2287..3007 -
1691683977.9852867-CDS-L-elsbetiae_contig9372:2286..30071691683977.9852867-CDS-L-elsbetiae_contig9372:2286..3007Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 2287..3007 -
1622817006.8653665-CDS-L-elsbetiae_contig9372:4188..44101622817006.8653665-CDS-L-elsbetiae_contig9372:4188..4410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 4189..4410 -
1691683978.0049274-CDS-L-elsbetiae_contig9372:4188..44101691683978.0049274-CDS-L-elsbetiae_contig9372:4188..4410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 4189..4410 -
1622817006.876617-CDS-L-elsbetiae_contig9372:4901..52581622817006.876617-CDS-L-elsbetiae_contig9372:4901..5258Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 4902..5258 -
1691683978.0172024-CDS-L-elsbetiae_contig9372:4901..52581691683978.0172024-CDS-L-elsbetiae_contig9372:4901..5258Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 4902..5258 -
1622817006.8878262-CDS-L-elsbetiae_contig9372:6585..66571622817006.8878262-CDS-L-elsbetiae_contig9372:6585..6657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 6586..6657 -
1691683978.0295923-CDS-L-elsbetiae_contig9372:6585..66571691683978.0295923-CDS-L-elsbetiae_contig9372:6585..6657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 6586..6657 -
1622817006.8985503-CDS-L-elsbetiae_contig9372:7429..75491622817006.8985503-CDS-L-elsbetiae_contig9372:7429..7549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 7430..7549 -
1691683978.0411665-CDS-L-elsbetiae_contig9372:7429..75491691683978.0411665-CDS-L-elsbetiae_contig9372:7429..7549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9372 7430..7549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9372.18372.1

>prot_L-elsbetiae_contig9372.18372.1 ID=prot_L-elsbetiae_contig9372.18372.1|Name=mRNA_L-elsbetiae_contig9372.18372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=525bp
MASQVHRQINKQVKASVWMAHDYPLKLKHIMPALEILSVRDDMAARLRSV
LSLAGIPQEGFPVKVSVPLMMTVKAVVTFENFRSDDIDPRNFVVPPEYQR
SRRMSKEKYIAGVVTGAGGSGSGGGGGGGGDRGDRGNSGALDSDDDEEEG
EEGDFVDGDEGELSEGELLRRRASARNAFDDDEEDDSDFEDEDMSDDGTP
CASPQPSNAQLSAPQSPAQPSPPQVSFDRTPKSKTGEQWQAYRGNPLLFF
GGAGFCLASAPSSASRGREEGLSSSSRNGAPRQHSRGRSVGAGVLGANAG
AAAAGAAPRPGMGHEAAATAPSPAGALDARKRQRSKSRSGKLVSQLRGIV
GGRRGSATSMGSGRVGYSLSDDDEEDSYEDEDGDFGPRRGNSGDHAAGNG
GGGWEGGGTLTTASQAAQLPRGHRRTSSAGGSRSGSASSLSALLGGPSAG
SSHPQRSPPGSVSNVRVAADVPLPVVAGSRLPRAPVAVPLSGSGGGGGVA
AGGVASGRGSALSAPKPPAPRNSE*
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mRNA from alignment at L-elsbetiae_contig9372:2171..7549-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9372.18372.1 ID=mRNA_L-elsbetiae_contig9372.18372.1|Name=mRNA_L-elsbetiae_contig9372.18372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5379bp|location=Sequence derived from alignment at L-elsbetiae_contig9372:2171..7549- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCATCGCAGGTTCACCGGCAGATCAACAAGCAGGTGAAAGCCTCCGT
GTGGATGGCGCACGACTACCCTCTCAAGCTGAAGCACATCATGCCGGCGC
TGGAGATCCTGTCCGTCAGGGTGAGTTACCGCCGTAGTAGTCACGTTTAG
TTAACGGTAGTTACGATAGTCTAGCTGTTGTTGAATAAAGAGATGAAAAT
CAGTGAATCGAGTCAAAAATGGAACCTAGCCTACAGGAGAGCCAAGACTT
CGTGGGTTTCAAACGGTATTCCATTAAGTGACGTAATATTGGTTCAGTAA
AGCAGAAAAACACCTAAAATATCCGAAGAACTCAGCATCAGCTGTTGTTG
GTGTTGGTGTTGGTGAGTGTATTCGAAATCGCAAAAATCGAGCAAAACCA
CGGCCCGTGCGTGGGTCACAAAAGTGTTGGAGCCATGGGAAGGCCCTGAA
CGACACACGCAACACCGAAGAGGAGGTGCGCCTAATTCCAGTGGGATGAA
GTGGACATCGCGACAGCAGACGTCCAGAGGGAGAGAGGAATACATCGTGA
TATGTTGTTGACTCGTTTTAGACATTTTATGTAGCACGTTCCGAAGGGGC
TCCGCGAATTATGTGGCTGGCTGGCTGGCTGATTGGCTGCTGCTGCTGCT
GCGGACACGAACGCAAGCGGCACTAAACAAACCGTACTTGGTGTGGCCCA
AACAAGCGAGGAGACACTAATTGCGTGGGCAGTAGGTCCAAGGTTCATCC
ATGCCAACATACCGAACGGTGGGGTTGACTTAGACGTTTGTTGCTGTCGT
GAGCTTAATTTAGTCACTGATCTTGTCGTCGGCTGTTATATATATATATA
TATGTACATGCGTTGGTTGAAAATGTCACCTTGTCCGTTCAGGATGACAT
GGCGGCAAGGCTTCGCTCTGTGCTCTCGCTGGCCGGCATCCCGCAAGAAG
GCTTCCCCGTCAAGGTTAGTGTCGTTTTTTTTCTTTAACGGATACCCACA
CGTTTACCAGCGCTCGTTTTGAAAGTCTCGTTTCGGTTCGTTCTTGTTTC
GTTCCGTTGCGTGAAACGGAACTTTGTAACTGTAAGACGTAGGCTTCCCC
GTCAAGGTTAGTGTCGTTTTTTTTTTCTTTTACGGATACCCACACGTTTA
CCAGCGCTCGTTTCAAAAGTCTCGTTTCGGTTCGTTTTTGTATCGTTCCG
TTCCGTTCCGTTGCGTGAAACGGAACTTTGTAACTGTAAGACGTAGGCTT
CCCCGTCAAGGTTAGTGTCGTTTTTGTTTTTCTTTTACGGATACCCACAC
GTTTACCAGCGCTCGTTTCAAAAGTCTCGTTTCGGTTCGTTTTTGTATCG
TTCCGTTGCGTGAAATGGAACTTTGTAACTGTAAGACGTAGGCTTCCCCG
TCAAGGTTAGGTTTCGTTTGGTCAAAAGTCTCGTTTCGTGAGACTGAGCT
AAATGACTTACTTGCCTTTCGTGTTGGAAATAAATCAGGAAATCAAAGAA
GAGAACCTCCCCACACTAGAGACGAGATTTCGTGGTGAATTTAACAGTTC
AATGACAGCATAGTGATGTATCTAGTATTGGTCCAGCCGAGTAGGGAAAC
ACCTGGAGCAAATGGAAAAAGTTCTGCCCTCGTGTTCTTGCTTGGACCGA
ACCACCGGTTGGTCGTTGAGATAGTCTACACATACATACAACGTTATATT
CTCCTTTCTCCCTTTTCTCGGCTTTTTTCTCGTCTTTGGGGCGAACGAAA
AAGGGGGCGTACCGTAGGTAAAGCAAAGTAACACGCCCCCTGGACAGATT
TTCAAAGCTCGGTTCCTCCCCAGCAAGACAAGTGCCGGGGCCGAAAGGGG
GTGGCGTTGGAAAGATCTAGTCGAGGGCTGCCCGAAAACGCGTGTCGTTT
GGTGCTCGCACCCTCTTCGTTGCGGAGTAATGGAGCCCTAAAATTCGGTC
CAAAGGGTGTAGTATCTTGTGCTATCTACGGCGGTATGCAGGTGCTTCGG
GTGGAGAATACTTCACACGTTTAAAACTAGTCGCCTGCATTGTCTCCTGG
GCTATCAAACCTACATGCGTATGTACATGTGCACGTAGGTTTCACAAGAT
ACCACATCCCCTGGGCCGACTTTTAGAGCTCCATTAGTCCGTGATGAAGA
GGGTGCCATTAGTCCGTCATATATGGTACATACATTCATACATTCTGTTT
TATTTTAATTTTTTTACGTTCTGCTACATTTTCTTTCCCAACAACGGCGG
CGGCGGCGGCGGCGGCGGCGACACGCGGCTCGGACGAGCAGGTCTCCGTG
CCGCTCATGATGACCGTGAAGGCCGTGGTGACGTTCGAGAACTTCCGCTC
GGATGACATCGACCCGAGGAACTTCGTCGTGCCCCCCGAGTACCAGCGCT
CCCGGCGCATGTCCAAGGAGAAGTACATCGCCGGCGTGGTCACGGGAGCC
GGCGGGAGCGGCAGTGGTGGTGGCGGCGGGGGCGGCGGCGATCGCGGTGA
CCGGGGTAATTCAGGCGCGTTGGATTCGGACGACGATGAGGAGGAGGGGG
AGGAGGGGGACTTCGTGGACGGGGATGAGGGCGAGCTAAGCGAGGGAGAG
CTGTTGAGGAGACGAGCCTCCGCGAGGAACGCCTTTGACGACGACGAGGT
AGGTGACTGGGGATGGGGGCGAGGGCAGGGGGGGCAGGCTTGGAGATGAT
GCAGTTTTTTCGTCTCTGGTTTTCTGTTCGGGTTGTTGTTGTTGTGACGG
AGGTGGCGGTCGTTGTTGGCTTGCATTTTCATGGATTCTGGCTTTTAGCG
GCGTGGGAGCAAGCCGCTGCGCGCGACGACGCGCGGCAGGCAGCCAGGAG
AGCTAAGCAGAACCGATCACACGACAACAGGCGTAAGAGAGACAACGAGA
AACAACCGGCTCTCTCTCTCTCTCTCGCCTCTAAAGTACTACCATCCCCA
TCATCATCATCTCCACCACCATCATCCCCATCATCATCATCTCCATCTCC
ATCATCATCATCCCCAACCCGCCCTCTTCGACTCCACCTTATTTCTGCCC
ACAGCGCCCACCTGTACCTACGTGTGTAAATGTATATACCTGTCTGTAAA
TCAACCATGTTATGTACCGTTCGCTTTTGTAAAACAAAGGAGGACGATTC
TGACTTCGAAGATGAGGACATGAGCGATGACGGCACGCCCTGTGCGTCCC
CCCAGCCCAGCAACGCCCAGCTGTCGGCCCCCCAGTCTCCGGCACAACCA
AGCCCACCCCAGGTGAGCTTCGATCGGACCCCCAAAAGCAAAACCGGCGA
GCAGTGGCAGGCATATCGCGGCAACCCTTTGCTTTTTTTTGGCGGGGCCG
GCTTTTGTCTCGTTCGAACTGACTGGCGGAGTGACTGCTGTACCAACCGT
AGGTGACACAAGATACCACACCCCCTGGACAGATTTTCAAAGCTCGATTA
TTCCCCAGCAGAAAGAGTGCCAGGGCCGAAAGGGGGCGCGGCGTTGGAAA
GATCTAGCCGAGGGCTGTCCGAAAACGTGTCGTTTGGTGTTGCTGGCCCC
CCTCTTCGTCGCGGAGTAATTAATGGAGCTCTAAGATTCGGTCCAGGGGG
GGTGGTATCTTGTGTCACCTACGGGGTAGCACGGCCGGTGCCCCGTTTTC
GATCAACCTTTGGAGGAGAAGGCGCAAGCAAAGACGCGTCTCGTCATTTC
GGCGTTCCACCAAACACATGTTTTTATTTTTCAGTCACATTCATTTACTT
CCAGTGCTCGATGGGTTCCTTGCCACGAGGGCATCTCGCCAGAGTACTGA
ACCGTGGTCACACAGAAGGGTTCCTCTCCCCGAGGCCCCCCAATCCCCCC
TTCTGCGGTGCTTGCCCCCCTTAAGATTTTTTCGCGAGAAGGGTTCAGCT
GTCCCCTAAGACTCGTCGACGGTGAGGTCGAAGTGATGGCCACGTAGGTC
TGGAAGTAAATACACCCACACTGGTCTGCAAGCAATTTCACCCCCCAAGC
TTTTTTACTTCGCGGCACGCACGGGATGCGGATTGATTGTGTTGATTGAT
GCTTCATTTGTTTTTTTGCAAATTTCCTGCTGCGCCTCCCGACTTTTGCC
AATCCTAAGCCCTCAAACCGTCACCATTTACCGCGGCATCGTAACTCCGA
CCTCAGCCCAAGCCTTATGCATTGCCAAGCTCTCGGTTGATCGGGACGTG
ACCAAAGCTGCATGCTTTACTGCTGTTCAATACGCACACGTGTCTGTACC
ATTCACTCGGTAGTGTATATCGTACAAGGAACACATGAGCATTAGATTCA
TGCTCCTGTCAAAAAAAAAAAATGCAGGTGTAGTACATGTGCACCCAATG
CACGAAGATGGCAACACGCAGCCGGCGAGAGAAAGCTCTTCTTGTCCTCT
CTCGTTGGTTGTGTCCTGTGTCCCCCTTACCATCGACCCGTTACCCGTCC
CTCCCTCCGAAGCACGACCTTAACCCCCTCTTCGCACATCTCCTCTCCTC
TCTCTCGCCCTCTTGCCCCTCCTCACGCCAACCAACCGGCAGGCGTCGGC
TCCGTCCTCGGCCTCCAGAGGGCGAGAGGAGGGTCTTTCTTCTTCGTCGC
GCAACGGAGCCCCCAGGCAGCACTCGCGCGGCCGGTCGGTGGGGGCGGGG
GTCTTGGGCGCCAACGCTGGCGCCGCTGCGGCAGGCGCTGCCCCCCGGCC
GGGGATGGGCCACGAAGCCGCCGCCACCGCCCCCTCCCCCGCCGGCGCCC
TCGACGCCCGCAAGCGGCAGCGGAGCAAGTCGCGCAGCGGAAAGCTGGTG
TCCCAGCTGAGGGGCATCGTTGGGGGCAGAAGGGGCTCCGCGACATCGAT
GGGCAGCGGGAGGGTGGGGTACTCGCTCAGCGACGACGACGAGGAAGACT
CGTACGAGGACGAAGACGGCGATTTCGGCCCCCGCAGAGGCAACAGCGGG
GACCACGCCGCCGGTAACGGCGGGGGCGGTTGGGAGGGCGGGGGGACCTT
GACCACAGCGTCCCAGGCGGCGCAGCTGCCACGGGGCCACCGGCGGACCT
CTTCGGCCGGCGGTAGCCGTAGTGGTAGTGCCTCTTCGCTTTCCGCACTG
TTGGGGGGCCCGTCAGCGGGGAGTAGTCACCCTCAGCGGTCTCCGCCAGG
TTCCGTGTCCAACGTCAGGGTGGCGGCGGATGTTCCCCTGCCGGTAGTTG
CGGGATCGCGGTTACCGCGCGCTCCAGTAGCGGTGCCATTAAGCGGCAGC
GGTGGTGGTGGTGGTAGTAATAGTAGTAGCAGGAGTAGGAGTAGAGGCGT
GGCCGCTGGCGGGGTTGCGAGCGGGAGGGGCTCCGCATTATCGGCACCAA
AACCGCCGGCGCCGCGAAATTCAGAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9372:2171..7549-

>mRNA_L-elsbetiae_contig9372.18372.1 ID=mRNA_L-elsbetiae_contig9372.18372.1|Name=mRNA_L-elsbetiae_contig9372.18372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3150bp|location=Sequence derived from alignment at L-elsbetiae_contig9372:2171..7549- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCATCGCAGGTTCACCGGCAGATCAACAAGCAGGTGAAAGCCTCCGT
GTGGATGGCGCACGACTACCCTCTCAAGCTGAAGCACATCATGCCGGCGC
TGGAGATCCTGTCCGTCAGGATGGCATCGCAGGTTCACCGGCAGATCAAC
AAGCAGGTGAAAGCCTCCGTGTGGATGGCGCACGACTACCCTCTCAAGCT
GAAGCACATCATGCCGGCGCTGGAGATCCTGTCCGTCAGGGATGACATGG
CGGCAAGGCTTCGCTCTGTGCTCTCGCTGGCCGGCATCCCGCAAGAAGGC
TTCCCCGTCAAGGATGACATGGCGGCAAGGCTTCGCTCTGTGCTCTCGCT
GGCCGGCATCCCGCAAGAAGGCTTCCCCGTCAAGGTCTCCGTGCCGCTCA
TGATGACCGTGAAGGCCGTGGTGACGTTCGAGAACTTCCGCTCGGATGAC
ATCGACCCGAGGAACTTCGTCGTGCCCCCCGAGTACCAGCGCTCCCGGCG
CATGTCCAAGGAGAAGTACATCGCCGGCGTGGTCACGGGAGCCGGCGGGA
GCGGCAGTGGTGGTGGCGGCGGGGGCGGCGGCGATCGCGGTGACCGGGGT
AATTCAGGCGCGTTGGATTCGGACGACGATGAGGAGGAGGGGGAGGAGGG
GGACTTCGTGGACGGGGATGAGGGCGAGCTAAGCGAGGGAGAGCTGTTGA
GGAGACGAGCCTCCGCGAGGAACGCCTTTGACGACGACGAGGTCTCCGTG
CCGCTCATGATGACCGTGAAGGCCGTGGTGACGTTCGAGAACTTCCGCTC
GGATGACATCGACCCGAGGAACTTCGTCGTGCCCCCCGAGTACCAGCGCT
CCCGGCGCATGTCCAAGGAGAAGTACATCGCCGGCGTGGTCACGGGAGCC
GGCGGGAGCGGCAGTGGTGGTGGCGGCGGGGGCGGCGGCGATCGCGGTGA
CCGGGGTAATTCAGGCGCGTTGGATTCGGACGACGATGAGGAGGAGGGGG
AGGAGGGGGACTTCGTGGACGGGGATGAGGGCGAGCTAAGCGAGGGAGAG
CTGTTGAGGAGACGAGCCTCCGCGAGGAACGCCTTTGACGACGACGAGGA
GGACGATTCTGACTTCGAAGATGAGGACATGAGCGATGACGGCACGCCCT
GTGCGTCCCCCCAGCCCAGCAACGCCCAGCTGTCGGCCCCCCAGTCTCCG
GCACAACCAAGCCCACCCCAGGTGAGCTTCGATCGGACCCCCAAAAGCAA
AACCGGCGAGCAGTGGCAGGCATATCGCGGCAACCCTTTGCTTTTTTTTG
GCGGGGCCGGCTTTTGTCTCGAGGACGATTCTGACTTCGAAGATGAGGAC
ATGAGCGATGACGGCACGCCCTGTGCGTCCCCCCAGCCCAGCAACGCCCA
GCTGTCGGCCCCCCAGTCTCCGGCACAACCAAGCCCACCCCAGGTGAGCT
TCGATCGGACCCCCAAAAGCAAAACCGGCGAGCAGTGGCAGGCATATCGC
GGCAACCCTTTGCTTTTTTTTGGCGGGGCCGGCTTTTGTCTCGCGTCGGC
TCCGTCCTCGGCCTCCAGAGGGCGAGAGGAGGGTCTTTCTTCTTCGTCGC
GCAACGGAGCCCCCAGGCAGCACTCGCGCGGCCGGTCGGTGGGGGCGGGG
GTCTTGGGCGCCAACGCTGGCGCCGCTGCGGCAGGCGCTGCCCCCCGGCC
GGGGATGGGCCACGAAGCCGCCGCCACCGCCCCCTCCCCCGCCGGCGCCC
TCGACGCCCGCAAGCGGCAGCGGAGCAAGTCGCGCAGCGGAAAGCTGGTG
TCCCAGCTGAGGGGCATCGTTGGGGGCAGAAGGGGCTCCGCGACATCGAT
GGGCAGCGGGAGGGTGGGGTACTCGCTCAGCGACGACGACGAGGAAGACT
CGTACGAGGACGAAGACGGCGATTTCGGCCCCCGCAGAGGCAACAGCGGG
GACCACGCCGCCGGTAACGGCGGGGGCGGTTGGGAGGGCGGGGGGACCTT
GACCACAGCGTCCCAGGCGGCGCAGCTGCCACGGGGCCACCGGCGGACCT
CTTCGGCCGGCGGTAGCCGTAGTGGTAGTGCCTCTTCGCTTTCCGCACTG
TTGGGGGGCCCGTCAGCGGGGAGTAGTCACCCTCAGCGGTCTCCGCCAGG
TTCCGTGTCCAACGTCAGGGTGGCGGCGGATGTTCCCCTGCCGGTAGTTG
CGGGATCGCGGTTACCGCGCGCTCCAGTAGCGGTGCCATTAAGCGGCAGC
GGTGGTGGTGGTGGCGTCGGCTCCGTCCTCGGCCTCCAGAGGGCGAGAGG
AGGGTCTTTCTTCTTCGTCGCGCAACGGAGCCCCCAGGCAGCACTCGCGC
GGCCGGTCGGTGGGGGCGGGGGTCTTGGGCGCCAACGCTGGCGCCGCTGC
GGCAGGCGCTGCCCCCCGGCCGGGGATGGGCCACGAAGCCGCCGCCACCG
CCCCCTCCCCCGCCGGCGCCCTCGACGCCCGCAAGCGGCAGCGGAGCAAG
TCGCGCAGCGGAAAGCTGGTGTCCCAGCTGAGGGGCATCGTTGGGGGCAG
AAGGGGCTCCGCGACATCGATGGGCAGCGGGAGGGTGGGGTACTCGCTCA
GCGACGACGACGAGGAAGACTCGTACGAGGACGAAGACGGCGATTTCGGC
CCCCGCAGAGGCAACAGCGGGGACCACGCCGCCGGTAACGGCGGGGGCGG
TTGGGAGGGCGGGGGGACCTTGACCACAGCGTCCCAGGCGGCGCAGCTGC
CACGGGGCCACCGGCGGACCTCTTCGGCCGGCGGTAGCCGTAGTGGTAGT
GCCTCTTCGCTTTCCGCACTGTTGGGGGGCCCGTCAGCGGGGAGTAGTCA
CCCTCAGCGGTCTCCGCCAGGTTCCGTGTCCAACGTCAGGGTGGCGGCGG
ATGTTCCCCTGCCGGTAGTTGCGGGATCGCGGTTACCGCGCGCTCCAGTA
GCGGTGCCATTAAGCGGCAGCGGTGGTGGTGGTGGCGTGGCCGCTGGCGG
GGTTGCGAGCGGGAGGGGCTCCGCATTATCGGCACCAAAACCGCCGGCGC
CGCGAAATTCAGAGTGAGCGTGGCCGCTGGCGGGGTTGCGAGCGGGAGGG
GCTCCGCATTATCGGCACCAAAACCGCCGGCGCCGCGAAATTCAGAGTGA
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