mRNA_L-elsbetiae_contig9368.18365.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9368.18365.1
Unique NamemRNA_L-elsbetiae_contig9368.18365.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: D8LR61_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR61_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 1.370e-149
Identity = 216/287 (75.26%), Postives = 240/287 (83.62%), Query Frame = 1 
Query:    4 GVANCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMSGRSPASGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDAPGSSARVPFMAPNSNTGGGDTYAASRTKESQLV 864
            G  NCGSLCTN GRYCMTDPDFDTK GVSGADVV+ESLRQKCVW  +GG DAPL DQG+GEKWWSYVNEFFSSCSVS NRF DE+CV RAMKAA     +D+  VD+CMSDSGG++    NTILEAEL EKGK SIVIVPTVFVNN+AERGGI+TAAVL+TICAGY  GTEP++CRC GQ ++E ++ACM+ R+   G GGMSAG+TLFLL AVVGAMTAAG+VHYKRTQ QMRDQVRGILAEYMPL+  DIDAPGSSARVPFM P S     DTY+  RTKESQLV
Sbjct:  259 GANNCGSLCTNDGRYCMTDPDFDTKAGVSGADVVRESLRQKCVWNTYGGEDAPLADQGVGEKWWSYVNEFFSSCSVSGNRFNDENCVARAMKAAE----VDKTVVDRCMSDSGGLEKSGVNTILEAELVEKGKKSIVIVPTVFVNNMAERGGINTAAVLTTICAGYKSGTEPEICRCAGQLSSEQVDACMNNRTIGGGSGGMSAGNTLFLLFAVVGAMTAAGFVHYKRTQAQMRDQVRGILAEYMPLE--DIDAPGSSARVPFMDPQSR----DTYSVGRTKESQLV 535
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A835YNB1_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB1_9STRA)

HSP 1 Score: 291 bits (745), Expect = 4.230e-92
Identity = 146/289 (50.52%), Postives = 196/289 (67.82%), Query Frame = 1 
Query:   13 NCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACM-SGRSPASGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDAPGSSARVPFM----APNSNTGGGDTYAASRTKESQLV 864
            +CG+LCTN GRYC  DPDFD  +G+SGAD+++E+LRQKC+W  +GG  A   +QGIGE+WW+YV  F   C +   +F D  C+ RAM  A     I+ + ++KCM +SGG+  D  NT+L  EL EK   SIV++PTV+VNNV ERGGI+ A+VL+TIC+GYA GTEP VC C GQ ++  +  C+ +G  P        A + L  + A +  M AAG+++Y+++Q  MRDQVRGILAEYMPLD  D+DAPGS+ARVPF+    A N N G G  YAA   K+++LV
Sbjct:  246 HCGNLCTNAGRYCNPDPDFDRDSGLSGADIIQETLRQKCIWLHYGGDKASKGEQGIGERWWTYVQTFSKKCGMG--KFVDSSCISRAMSEAK----INEKTINKCMDESGGLQGDIDNTLLSEELKEKANKSIVVIPTVYVNNVVERGGITAASVLTTICSGYAGGTEPKVCSCAGQGSSTAVKLCVRNGGKPPGXXXASGASTILGSVFAAMLVMGAAGFLYYRKSQEAMRDQVRGILAEYMPLD--DMDAPGSNARVPFISHHGAGNGNAGNGGGYAAP--KDTRLV 524
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A6V1XHF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHF6_HETAK)

HSP 1 Score: 276 bits (705), Expect = 2.860e-86
Identity = 133/265 (50.19%), Postives = 180/265 (67.92%), Query Frame = 1 
Query:    1 TGVANCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMSGRSP-ASGGG--GMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDAPGSSARV 786
            T    CG+LCTN+GRYC+ DPD D   G+SGADVV+E+LRQ C+W+ +GG  A   D G+G KWW YVN F ++C+  E +F    C    MK AG    +D   VDKCM+D+GG++ D PN +L AE++EK ++SIVIVP+V+VN V ERG + +  VLST+CAGYA GTEP +C C      E + AC++     A+GGG  G+S G  + +++A+V  MTAAG  +++RTQTQMRDQVRGILAEYMPL+    D  G+  ++
Sbjct:  245 TASDKCGNLCTNQGRYCLPDPDNDRHKGISGADVVEENLRQLCIWRAYGGDAANQADIGVGTKWWRYVNGFQAACNTPE-KFASAACKANVMKQAG----VDSSKVDKCMADAGGLEGDVPNALLAAEISEKDRHSIVIVPSVYVNGVVERGAVLSTTVLSTVCAGYAPGTEPSICACASGVGREEMMACVAADGKKATGGGPTGVSVGGVISIILAIVAVMTAAGLFYWRRTQTQMRDQVRGILAEYMPLEDLGTDKAGTDTQI 504
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: W7TP62_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP62_9STRA)

HSP 1 Score: 271 bits (693), Expect = 6.400e-85
Identity = 144/285 (50.53%), Postives = 188/285 (65.96%), Query Frame = 1 
Query:   13 NCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMSG------RSPASGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDAPGSSARVPFMAPNSNTGGG--DTYAASR 843
            +CGSLCTN GRYCM DPD D   G SG D+V E+LRQKC+W  +GG +   K++G+G  WW YV EF   CS   +RFTD +C+  AM AAG    +D + ++ CM D+GGVD D  N IL+AEL+EK K SIVIVP+V+VNNV +RGGIS+  VLS+ICAGY +GT+P VC C G    +++     G      +     GGG+S G  L ++  V+  MTAAG+V++KRTQ QMR+QVR ILAEYMPL+    DAPG S       P++  GGG  D+++ SR
Sbjct:  103 HCGSLCTNHGRYCMPDPDKDPYHGYSGRDIVIENLRQKCIWNHYGGENTG-KEEGVGLPWWGYVREFTEKCS-RRSRFTDPNCIKEAMGAAG----VDHKKIEACMEDAGGVDQDRENLILQAELSEKLKKSIVIVPSVYVNNVVQRGGISSVTVLSSICAGYLEGTQPKVCNCVGVAPDQVMTCVQGGDYRPVSQKMGGSGGGVSWGGVLGIVTLVILGMTAAGFVYWKRTQEQMREQVRSILAEYMPLE----DAPGDSN------PSTTAGGGSVDSFSGSR 371
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A4D9DEA6_9STRA (PA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA6_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.930e-84
Identity = 145/285 (50.88%), Postives = 188/285 (65.96%), Query Frame = 1 
Query:   13 NCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMSG------RSPASGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDAPGSSARVPFMAPNSNTGGG--DTYAASR 843
            +CGSLCTN GRYCM DPD D   G SG D+V E+LRQKC+W  +GG +   K++G+G  WW YV EF   CS S +RFTD +C+  AM AAG    +D + ++ CM D+GGVD D  N IL+AEL EK K SIVIVP+V+VNNV +RGGIS+  VLS+ICAGY +GT+P VC C G    +++     G      +     GGG+S G  L ++  V+  MTAAG+V++KRTQ QMR+QVR ILAEYMPL+    DAPG S       P++  GGG  D+++ SR
Sbjct:  232 HCGSLCTNHGRYCMPDPDKDPYHGYSGRDIVIENLRQKCIWNHYGGENTG-KEEGVGLPWWGYVREFTEKCSRS-SRFTDPNCIKEAMGAAG----VDHKKIEACMEDAGGVDQDRENLILQAELLEKLKKSIVIVPSVYVNNVVQRGGISSVTVLSSICAGYLEGTQPKVCNCVGVAPDQVMTCVQGGDYRPVSQKMGGSGGGVSWGGVLGIVTLVILGMTAAGFVYWKRTQEQMREQVRSILAEYMPLE----DAPGDSN------PSTTAGGGSVDSFSGSR 500
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A7S2UWY7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY7_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.180e-81
Identity = 127/247 (51.42%), Postives = 176/247 (71.26%), Query Frame = 1 
Query:   13 NCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMS--GRSPASGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLD 747
            +CG+LCTN+GRYC+ DPD D   G+SGAD+V ESLRQ C+WK++G  DA   ++G+G  WW Y     + CS   + F D  C+  AM AAG    +D+  V+KCM +SGG +    N +L AE++EK +++IVI P+V+VNN+AERG ++   V+STICAGYA GTEP +C+C G P  +++ AC+S  G    S  GG+S G+ + +++AVV AMT AG+V++KRTQ+QMRDQVRGILAEYMPL+
Sbjct:  179 HCGNLCTNEGRYCLPDPDNDRSNGLSGADLVAESLRQLCIWKIYGSQDAEESNRGVGLPWWEYTVHHATDCSP--DHFADTACIEAAMHAAG----VDKGKVEKCMLESGGTEKGV-NDLLAAEVSEKDRHTIVITPSVYVNNIAERGAMTAPQVMSTICAGYAAGTEPGICQCTGMPREDLL-ACVSRDGAKEPSSTGGISPGAVVGIILAVVAAMTLAGFVYWKRTQSQMRDQVRGILAEYMPLE 417
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A836CIN2_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN2_9STRA)

HSP 1 Score: 264 bits (674), Expect = 6.490e-81
Identity = 130/268 (48.51%), Postives = 172/268 (64.18%), Query Frame = 1 
Query:   13 NCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMSGRSPASGGGGMSAGSTLFLLVAVVGA------------MTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDAPGSSA 780
            +CG+LCTN GRYC  DPDFD  +G+SGADV++E+LRQKC+W  +GG  AP  DQG+G KWWSYVN+F + C+   ++FTDE CV  AM   G    ID+  + +CM+DSGG++ D  NT+L  EL EK   SIV+ PTV+VNNV ERGGI+ A+VL+T+C+GYA GTEP  C+C GQ ++  +  C+S         GM  G                        M+A G ++Y++ Q  MRDQVRGILAEYMPL+  D  A G++A
Sbjct:  231 HCGNLCTNAGRYCNPDPDFDRDSGLSGADVIRETLRQKCIWLHYGGAQAPEADQGVGIKWWSYVNKFTTLCNT--DKFTDETCVAAAMSECG----IDKTLIGRCMTDSGGLEGDIDNTLLSDELREKSTKSIVVTPTVYVNNVVERGGITAASVLNTVCSGYASGTEPSACKCAGQGSSSAVRLCISN--------GMRPGXXXXXXXXXXXXXXXXXXXXXXXXMSAVGLLYYRKQQAAMRDQVRGILAEYMPLEDMDAVAGGAAA 484
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A7S2XLY3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLY3_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.280e-68
Identity = 122/259 (47.10%), Postives = 155/259 (59.85%), Query Frame = 1 
Query:    4 GVANCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVCR----CRGQPNAEMINACMSGRSPASGGGGMSAGSTLFLLVAVV-GAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADIDA 765
            G   C +LCTN GRYC TDPD D + G SGADVV ESLR+ C+WK +G  D      GIG +WW YV EF   C   +  F +EDC+    K A K   ID   VD+CM DSGG++ D PN  L+ E+  + +  +V++PT FVN  A RG +S A++   ICAG+ DGTEPD+C     C  Q        C    +  SGGGG  A  T FL + V+ G   AAG+ H+K+T+  MRDQVRGILAEYMPL+  + DA
Sbjct:  257 GKNMCFNLCTNNGRYCATDPDNDLEKGTSGADVVTESLRRICIWKHYGEAD------GIGVEWWDYVAEFMHRCDTPDF-FANEDCI----KDAYKHSNIDGGMVDRCMRDSGGLEKDVPNAFLDLEINSQTQRGVVVLPTAFVNTAAIRGSLSVASIFDAICAGFLDGTEPDICTKCVSCPDQIGCVRAKKC----AHTSGGGGGVAPHTFFLTIFVICGMFGAAGFYHWKKTKDDMRDQVRGILAEYMPLEDNENDA 500
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A7S2VZ07_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ07_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.750e-66
Identity = 126/259 (48.65%), Postives = 158/259 (61.00%), Query Frame = 1 
Query:    4 GVANCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVC-RCRGQPNA-EMI--NACMSG--RSPASGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGADID 762
            G   C +LCTN+GRYC TDPD D ++G+SGADVV ESLR+ C+W+ +G  D      GIGEK+W Y  EF S C      F + DCV  A K A     ID+  +++CM DSGGV  D  N  L   L  + K  IV++PT FVN V  RG +S ++V + ICAG+ DGT+PD+C  C G PN  E +  N C SG     A G  G+S     F L++V     AAGY H+KRTQ  MR+QVRGILAEYMPL+G D D
Sbjct:  269 GENMCYNLCTNQGRYCSTDPDDDLESGISGADVVTESLRRICIWEHYGDED------GIGEKFWKYNEEFLSRCDTP-TFFMNSDCVNDAFKQAK----IDKDVIERCMHDSGGVTGDTTNQKLSDALDTQTKQGIVVLPTAFVNTVPLRGALSASSVFNAICAGFLDGTQPDICLACAGCPNTVECVANNGCSSGIYAKVARGKQGVSKRLFAFSLLSVCIVFGAAGYWHWKRTQEDMREQVRGILAEYMPLEGGDED 516
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BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Match: A0A1E7F741_9STRA (PA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F741_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.450e-65
Identity = 117/252 (46.43%), Postives = 159/252 (63.10%), Query Frame = 1 
Query:   16 CGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGGPDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPCIDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAERGGISTAAVLSTICAGYADGTEPDVC-RCRGQPNAEMINACMS--GRSPA--SGGGGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDGAD 756
            C +LCTN GRYC TDPD D   G+SGADVVKESLR+ C+WK +G  D      G+GE WW+YV EF + C+ ++  F +EDCV    K   K   +D   VD+CMSDSGG+  DAPN  L++E+  + +  +V++PT FVN  A RG +S+ +V S IC+G++DGT P +C +C G  +      C+S  GR PA  S  G +S+ +  F +  +  A    GY HY +T+  MR+QVRGILAEYMPL+  D
Sbjct:  262 CYNLCTNNGRYCATDPDNDLDQGISGADVVKESLRRLCIWKHYGESD------GVGETWWNYVEEFMARCNTADY-FMNEDCV----KDCYKHAKVDGEKVDRCMSDSGGLTRDAPNAFLDSEILAQSERGVVVLPTAFVNTAAMRGQLSSTSVFSAICSGFSDGTRPVICDQCSGCSDTVT---CVSKGGRCPAGSSSSGQVSSNTFGFTIFFMAFAFAGVGYWHYNKTRDDMREQVRGILAEYMPLEDND 499
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9368.18365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR61_ECTSI1.370e-14975.26PA domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YNB1_9STRA4.230e-9250.52PA domain-containing protein n=1 Tax=Tribonema min... [more]
A0A6V1XHF6_HETAK2.860e-8650.19Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
W7TP62_9STRA6.400e-8550.53Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DEA6_9STRA1.930e-8450.88PA domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A7S2UWY7_9STRA4.180e-8151.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CIN2_9STRA6.490e-8148.51PA domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S2XLY3_9STRA5.280e-6847.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2VZ07_9STRA1.750e-6648.65Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7F741_9STRA1.450e-6546.43PA domain-containing protein n=1 Tax=Fragilariopsi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9368contigL-elsbetiae_contig9368:155..5731 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.7
Seed ortholog evalue2.1e-120
Seed eggNOG ortholog2880.D8LR61
Preferred nameVSR1
KEGG rclassRC00718
KEGG koko:K01859,ko:K17637
KEGG ReactionR02446,R06556,R07990,R07995
KEGG Pathwayko00941,ko01100,ko01110,ko04014,map00941,map01100,map01110,map04014
KEGG ModuleM00137
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0007034,GO:0008104,GO:0008150,GO:0009940,GO:0010008,GO:0010209,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0030135,GO:0030136,GO:0030659,GO:0030662,GO:0030665,GO:0031090,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098588,GO:0098791,GO:0098805
EggNOG free text desc.amino-terminal vacuolar sorting propeptide binding
EggNOG OGs28KFV@1,2QSX2@2759
EC5.5.1.6
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons6
Model size867
Cds size867
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9368.18365.1prot_L-elsbetiae_contig9368.18365.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9368 155..5731 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817006.2030427-CDS-L-elsbetiae_contig9368:154..3281622817006.2030427-CDS-L-elsbetiae_contig9368:154..328Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 155..328 +
1691683977.4690592-CDS-L-elsbetiae_contig9368:154..3281691683977.4690592-CDS-L-elsbetiae_contig9368:154..328Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 155..328 +
1622817006.2166471-CDS-L-elsbetiae_contig9368:2180..23041622817006.2166471-CDS-L-elsbetiae_contig9368:2180..2304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 2181..2304 +
1691683977.4821703-CDS-L-elsbetiae_contig9368:2180..23041691683977.4821703-CDS-L-elsbetiae_contig9368:2180..2304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 2181..2304 +
1622817006.2272906-CDS-L-elsbetiae_contig9368:3646..37441622817006.2272906-CDS-L-elsbetiae_contig9368:3646..3744Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 3647..3744 +
1691683977.4927886-CDS-L-elsbetiae_contig9368:3646..37441691683977.4927886-CDS-L-elsbetiae_contig9368:3646..3744Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 3647..3744 +
1622817006.2404454-CDS-L-elsbetiae_contig9368:4596..47221622817006.2404454-CDS-L-elsbetiae_contig9368:4596..4722Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 4597..4722 +
1691683977.5067337-CDS-L-elsbetiae_contig9368:4596..47221691683977.5067337-CDS-L-elsbetiae_contig9368:4596..4722Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 4597..4722 +
1622817006.253129-CDS-L-elsbetiae_contig9368:5083..52721622817006.253129-CDS-L-elsbetiae_contig9368:5083..5272Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 5084..5272 +
1691683977.5175219-CDS-L-elsbetiae_contig9368:5083..52721691683977.5175219-CDS-L-elsbetiae_contig9368:5083..5272Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 5084..5272 +
1622817006.266172-CDS-L-elsbetiae_contig9368:5575..57311622817006.266172-CDS-L-elsbetiae_contig9368:5575..5731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 5576..5731 +
1691683977.5303771-CDS-L-elsbetiae_contig9368:5575..57311691683977.5303771-CDS-L-elsbetiae_contig9368:5575..5731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9368 5576..5731 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9368.18365.1

>prot_L-elsbetiae_contig9368.18365.1 ID=prot_L-elsbetiae_contig9368.18365.1|Name=mRNA_L-elsbetiae_contig9368.18365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
TGVANCGSLCTNKGRYCMTDPDFDTKTGVSGADVVKESLRQKCVWKLHGG
PDAPLKDQGIGEKWWSYVNEFFSSCSVSENRFTDEDCVGRAMKAAGKFPC
IDRRAVDKCMSDSGGVDSDAPNTILEAELTEKGKNSIVIVPTVFVNNVAE
RGGISTAAVLSTICAGYADGTEPDVCRCRGQPNAEMINACMSGRSPASGG
GGMSAGSTLFLLVAVVGAMTAAGYVHYKRTQTQMRDQVRGILAEYMPLDG
ADIDAPGSSARVPFMAPNSNTGGGDTYAASRTKESQLV*
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mRNA from alignment at L-elsbetiae_contig9368:155..5731+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9368.18365.1 ID=mRNA_L-elsbetiae_contig9368.18365.1|Name=mRNA_L-elsbetiae_contig9368.18365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5577bp|location=Sequence derived from alignment at L-elsbetiae_contig9368:155..5731+ (Laminarionema elsbetiae ELsaHSoW15)
ACGGGGGTCGCGAACTGCGGGTCGTTGTGCACCAACAAGGGTCGGTACTG
CATGACGGACCCGGACTTCGACACGAAGACGGGGGTGTCGGGGGCGGACG
TGGTGAAGGAGTCGTTGCGGCAGAAGTGCGTCTGGAAGCTGCACGGCGGC
CCGGACGCCCCTTTGAAGGATCAGGTGTGTGTGTGTGTGTGTGTCAATTT
GTCCGTCCGTGCGTAAGTGCTTTCCCCCCCCGCAACTGCCTTTCCTCGAT
TGCTGTTTTTGTTGTCTTCACATAAAAAATAAAAAAATAAAAGTTCCGAT
CCCTTTTAACCCAGTCAGTTATGTACCTCCATCTGTCCGTAAATATTGTA
CATATTATAGGGACATCACAAGGGTATTGCCTTAAAGTCCTTTTCAAAAG
TCTGTGAGAAAAGTCCGTGACGGTCGGACCATTTTGTGGGCGGGACCGTC
AAAAGTGCCGGTTCGACCCCCGGTATCTAACGAAGGGTTGATTTGAGAAG
ATGTGAGATACAAAAAAGGAACGAGTGAAAAACCTTCGGGAGTGGAGCGT
ACGACGCACACAGGACGTAATCAGCACATAATCTTGCATCTCATCGGGCA
TCACATGCCACATGTGTATGCAGGAATGCCTGCTGTGCAGCAGCGCAGCA
GAGGGACAGGCGGGACGGCGGTGTGTGGTGGAAAAACATTTGTCCGCACT
CTGCAAAAAAAAACAAACTAATTTTTACTTTTCCGCGTGGTGGCGTCTGT
CGCGAACACTGCCGGCAGTCGGCAGCGAGCTATAACAAACGCACCAGACG
CCCTCTACAGGGTATATCTATGAGACCCATTGGTGTATAGCAGTGGGAAC
CTTTCCCTTGTCTCTGTTTGGGGGGGCTGAAAAGCCGTACTTGCTTGACA
CCGCAGCAGCAGGCAAGGAAGAGCGGAATCGTCAGTTGGCTATTTTTCTG
CTGATCGCCACACATCCACAAAACAGCCTACCCCAGCACACCTTAGCACC
AGAGGATGCTCTGAGGAGGGCTCTTAGTGCTCTTTCGCGGACGCATGTCT
CTGGGGTGGTGCGTTTTGCATCTCTGACCCGGTGTGTACACGTCAGGCTG
CAGGCCCGCAAGCTGTGTGCGTGGCAGGTGTCGGTTGGGAAAAGGACATA
TTTTTTCCCTACAATACGACTTGCATCGAATAAATTCAAAATGTTCAGAA
AAAGTCCTTGGCTAAAAGTACGTTTGACGCGCGGCCTACCCTCCGAAACG
TATTATGAACCGGAACAAGGAAAAGGTCTTATTATTGGGAAACGTAGTTA
TTATTTTTCGTGTGATAACCTACTATTCTCTCTCGATACCCTTAATTTAA
GTATGTACCTCCATCTGTCGGCAAATATTTACATATTCTCTCTCATTATA
CCCGTAATTTAAGTATACCTCCATCTGTCCGTAAATATTATATTTACATA
TTCTCTCTCAATACCCTGAATTAGAGTACCCTTGGCGTTTCTCGCCGTCT
TTTACAGTGGTCCGGGATGAAGAGAAAGGGTAGTGTTTTGGTCGTGCTTA
TCGCGGACCCATTCTTATTTTGGCAGAATATACTATAGGAGGATAGATGC
TAGCCGTTGGCGGGGAATGCGGTCCTGTTGTTCTTGGCGATGGTATGCTG
TACATCGATAAATATGTAGAACAGGTTGCAGGCTTTGCCTCGTCGTGGGT
GGCAAATGGTGAACATGCGCCGTGATTTAGGTGGCTATCCTGCCTTACGA
TTTGTTCTTGCCCTTGCCCCACGCCACTGAAACCTAGCCCCAGCGTTTCT
GTTTGAGTGTTGATTGGGGGCGCTCGGTATTAGAGGGCGCCCACACAGAC
CAACCCGCGCACTCAACAACCCGCCGCTTTCCCGCTGCCGCTGCTGCTCC
TGCTGCTGCTCCTGCTGCTGCTGTTCCTGTGCCTTTGTTTTTCGCGTTTG
CGCCTCCCCTGCCTCGTTTTTTCTTGCCGACCTCCCTCCCTTGCTTTTCC
GAAAATGAACTGTTATGAATTATAAGGGCATCGGAGAGAAGTGGTGGTCG
TACGTGAACGAGTTCTTTTCCTCGTGCTCCGTGTCAGAAAACAGATTCAC
AGACGAGGATTGCGTGGGTCGGGCCATGAAGGCGGCAGGCAAGTTTCCGT
GTTTTCTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC
CCGTTGTGTTTTTTTTTTTTTTTTTTTTTTACAAGGGGGGGGAAAAGCAC
TTTTTTTTTAGTGTTTTTGNNNNNNNNNNTGGAAGAAAGGGGGGGGGGGG
GGGGGGGGTGGGGGGGGGGGCCTTTTTTGGCGGCGGGCAGGTTTCCGTGT
TTTCTTCGTTTTTTTTTTTTTTTTTTTGTTCCACGTGTTTCCCCGCCTGT
GGTGCGTTGGTACGTTGATTGGTTGAACGAGTAGTGGGAAACGCATTTTT
TTGCTGGTGCTTGGACCGTGTGTGCGTGGTTGCTTGCGCGCGTGCCTTGT
GCTTCTCTGATTTGTCGTGCCCCGGGGGGGGGGGGGGGCCGCATAATGCG
CGGGTGGGTGTGGCAAATGACGACAATTGCTAGCCTGAGGGTCTGACAAT
GAGTGCTGATAGTGCTGCTACGATGCCACACAAAACAATTCACAGCGCAC
GGCGGTATATGCCCCCGGTTCCGCCACGGAAATGCCCTTAAAGCTTTCGT
CCGTCTCCAGACCTGTCATTCGGCATGCTTTTGTTTTTGTCGTTTTGATG
GCGTTATCGCTGAACAGTAGTAGCTAGCGGTGGCCTGCCTAAAGCTGGAG
CAGCAGCAGTCGGTTGCAGGGAGAGCATTTTGTTTTTACCTGGTACCTAC
AGAGCGTGTCTCTAGGTACTTGTACCGCCGCCGATCGTAAAGTAGATACA
TGAGTATATGTTGGTATCTTGCGCTTTTGTTGCGAGCCGACCGACAACCA
CAGCCCTCCCGTTACATGCCTTTATATATTGAGACACACACCCAGGCAGA
CAGGCACCCCTGCTCTTGGAGCGAATGCAGACTATCCAAGACTCTCTTGA
ATGTTTGTTGTGTGCCATCCCCTGTGGAATCCGCTGTTGCTGCTGCTGCT
GCTGCTGCTGCTGTCTTTGGACATGGTAGTCTCTCGGACATGGGTTCACC
TCCTACAAAAGATCATCCGAAGGGTTCCAACCAGCTACATACATATCACC
GAACGTAATTAGTTGCAAGCGGCAAATTCTGGCTAACTAGCTGTGATCCG
AGAGGCGGTCTTTGCAAGTGCACCAGCTGGTGTTTTTTTTTTTAGTGCGC
GCCCTCTTCCCCTAATATTTACAATAACAGAGTTCGTTTTTTCAACACTA
ATTTCACTTACTCAGCCTGCTGCTTCCTTCCTTGTATCTTCGCGCCCAAA
TAGTTGTACTATTGACGAATATTTCGTTGCCTCGAAAAACGGGTATCAAA
ACCAACGAAACTCCCCACAACCGTGTGCGTACCATGTAACAGGCATCGAC
AGAAGGGCCGTGGACAAGTGCATGTCGGATTCCGGCGGCGTAGACTCCGA
TGCCCCCAACACGATCCTGGAGGCGGAACTAACCGAGAAGGTGGGTTATC
CAACTTTTTTATCTAAGACAAATAGAGACAGGGGCCCCGTAATCCTGACC
CTAACCCTGTCCCAAAACCCCGACCCCCCTTTCCCGATCCCCATATTTGA
TCCCATATGTCAGCTTTAGACAAACTCTGCGAAGGCTGTATGTACTGTTA
TTTAGACAGATTCTAGACGACTTTGACCACCAACCCCGCGTGCGCGCGCT
CGCTTTCTCGCCTCTCGCACACGCATACCTGTAAGCGTCCCGTGTACACG
CAGTCGTTTGTTCGAAAAGAAACCGGGGACAAATAACGTCCCGTCCCCGC
ATTGTAGACGGGTCCCCGTGGTGGATTCACAATACAGAGTTCTGTATTGT
TTGCTCTCTCTTTTTTTTCGTTCCACATGGGAGGTTGTGTTGGCCACAGA
GGTTTGCGGTTTGAGAAATGAGCACCAGCAATGTACTTGTATAAATGCTT
GGGAGTAGTAGAATAGTTTCATTGTCTATTTACGTCGAAGAAATAGTAGT
ATCAGTTTAGGTAGACATGAACCTTGCGGTTTAAAAAATGAAGACGATGT
GCACGGTGCTTTGGAGGACATTTTTTTGTATGTGTACTCGTTTAAGTAGA
CATGGGGCCCCTGCCTTAGGGTCGTTCCAATTACTCTCTGTACCAATCGC
GCGTACACGGCATGATGGCTAGAAGTACTTGTACATACACAAACCATAGA
CTGCTGCTGCTGCTGCGGCTGCGGCTGTTGCTGTGCGTGTCACACAAGAA
AGAGGGAGGATAAAAAAGATGGAAAAAAAAAATGTGATATTTGATGTGCG
TATGTAAATACTGCTGTAAAAAACGCTTTCTCAATTTCGCAGGGCAAGAA
CTCGATCGTGATCGTGCCCACCGTGTTCGTCAACAACGTGGCGGAGCGCG
GAGGCATCAGCACCGCCGCCGTTCTCAGCACCATCTGCGCGGGCTACGCG
GACGGGACTGAGCCCGATGTGCGTCTCTGGCGGCGTTTGTTTTGTTTTTG
CTCTGTTGTTTTCGCTTTGCTCAAGCTGTCTTTTCTTACCCCCCGGGCCT
GCCGCCTGTTCATTTTGCTCTTCTCTAACCACGAGGTTTGTTTTAGCTCC
CAGGGGTGTGTGCTGTCTCGCCCGTGTTTGGTCGTTGATCTTCAAAACAA
GCTTTTCTTCTGGATTCAGTTTTTGGTGGATGTCTTGTTTTTACTGTTGG
TTTCTCTTGCTGAAACGCCGCCGCCGCGGTTGTCGCCGTCTCGTCTGTTT
TTTTTCATCTGTTCCTGTTTTCCCGTTCGTGTTTTTTGTGGGTGGGTCCT
TTGGCCAATCACGTGACTCAATATCGCAGGTGTGCCGGTGCAGGGGACAG
CCCAACGCTGAGATGATCAACGCCTGCATGTCCGGCCGAAGTCCGGCCAG
CGGGGGCGGGGGGATGTCGGCGGGCAGCACCCTCTTCCTCCTGGTGGCGG
TGGTGGGCGCCATGACGGCGGCCGGCTACGTGCACTACAAGCGCACGCAG
ACGCAGATGCGGGACCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTTGCTTGTTGTGGATGTTGGTGTCATGCGTGTTTGTT
CGCGTAGACCACACAAATGGACTGACCATGTCGAGGAATACGTCAGCCTG
GAGCGAGGAGGTGTGTATGGGAAGACACGGGCTGACCCCTGTCGTGGAGA
CCCCGAAGCGAAATAAAGAAAGGGTGAGTGCCGCCCCTTAGGTCTCCTCC
CCGTGCGTATTTCCCCTCAATATTATTCTCTTGGTTGATCTTGAGCTCTT
GTTGTTCCTCCCCCCGTTCAGGTTCGAGGCATCTTGGCCGAGTACATGCC
GCTGGATGGCGCTGACATCGACGCTCCCGGGTCGTCAGCACGGGTGCCGT
TCATGGCGCCCAATTCTAACACGGGGGGCGGGGACACGTACGCGGCCAGC
CGCACAAAAGAGTCGCAGCTCGTGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9368:155..5731+

>mRNA_L-elsbetiae_contig9368.18365.1 ID=mRNA_L-elsbetiae_contig9368.18365.1|Name=mRNA_L-elsbetiae_contig9368.18365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig9368:155..5731+ (Laminarionema elsbetiae ELsaHSoW15)
ACGGGGGTCGCGAACTGCGGGTCGTTGTGCACCAACAAGGGTCGGTACTG
CATGACGGACCCGGACTTCGACACGAAGACGGGGGTGTCGGGGGCGGACG
TGGTGAAGGAGTCGTTGCGGCAGAAGTGCGTCTGGAAGCTGCACGGCGGC
CCGGACGCCCCTTTGAAGGATCAGACGGGGGTCGCGAACTGCGGGTCGTT
GTGCACCAACAAGGGTCGGTACTGCATGACGGACCCGGACTTCGACACGA
AGACGGGGGTGTCGGGGGCGGACGTGGTGAAGGAGTCGTTGCGGCAGAAG
TGCGTCTGGAAGCTGCACGGCGGCCCGGACGCCCCTTTGAAGGATCAGGG
CATCGGAGAGAAGTGGTGGTCGTACGTGAACGAGTTCTTTTCCTCGTGCT
CCGTGTCAGAAAACAGATTCACAGACGAGGATTGCGTGGGTCGGGCCATG
AAGGCGGCAGGCAAGTTTCCGTGGCATCGGAGAGAAGTGGTGGTCGTACG
TGAACGAGTTCTTTTCCTCGTGCTCCGTGTCAGAAAACAGATTCACAGAC
GAGGATTGCGTGGGTCGGGCCATGAAGGCGGCAGGCAAGTTTCCGTGCAT
CGACAGAAGGGCCGTGGACAAGTGCATGTCGGATTCCGGCGGCGTAGACT
CCGATGCCCCCAACACGATCCTGGAGGCGGAACTAACCGAGAAGGCATCG
ACAGAAGGGCCGTGGACAAGTGCATGTCGGATTCCGGCGGCGTAGACTCC
GATGCCCCCAACACGATCCTGGAGGCGGAACTAACCGAGAAGGGCAAGAA
CTCGATCGTGATCGTGCCCACCGTGTTCGTCAACAACGTGGCGGAGCGCG
GAGGCATCAGCACCGCCGCCGTTCTCAGCACCATCTGCGCGGGCTACGCG
GACGGGACTGAGCCCGATGGCAAGAACTCGATCGTGATCGTGCCCACCGT
GTTCGTCAACAACGTGGCGGAGCGCGGAGGCATCAGCACCGCCGCCGTTC
TCAGCACCATCTGCGCGGGCTACGCGGACGGGACTGAGCCCGATGTGTGC
CGGTGCAGGGGACAGCCCAACGCTGAGATGATCAACGCCTGCATGTCCGG
CCGAAGTCCGGCCAGCGGGGGCGGGGGGATGTCGGCGGGCAGCACCCTCT
TCCTCCTGGTGGCGGTGGTGGGCGCCATGACGGCGGCCGGCTACGTGCAC
TACAAGCGCACGCAGACGCAGATGCGGGACCAGGTGTGCCGGTGCAGGGG
ACAGCCCAACGCTGAGATGATCAACGCCTGCATGTCCGGCCGAAGTCCGG
CCAGCGGGGGCGGGGGGATGTCGGCGGGCAGCACCCTCTTCCTCCTGGTG
GCGGTGGTGGGCGCCATGACGGCGGCCGGCTACGTGCACTACAAGCGCAC
GCAGACGCAGATGCGGGACCAGGTTCGAGGCATCTTGGCCGAGTACATGC
CGCTGGATGGCGCTGACATCGACGCTCCCGGGTCGTCAGCACGGGTGCCG
TTCATGGCGCCCAATTCTAACACGGGGGGCGGGGACACGTACGCGGCCAG
CCGCACAAAAGAGTCGCAGCTCGTGTAGGTTCGAGGCATCTTGGCCGAGT
ACATGCCGCTGGATGGCGCTGACATCGACGCTCCCGGGTCGTCAGCACGG
GTGCCGTTCATGGCGCCCAATTCTAACACGGGGGGCGGGGACACGTACGC
GGCCAGCCGCACAAAAGAGTCGCAGCTCGTGTAG
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