mRNA_L-elsbetiae_contig9325.18326.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: D8LS96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS96_ECTSI) HSP 1 Score: 233 bits (595), Expect = 1.060e-71 Identity = 199/290 (68.62%), Postives = 214/290 (73.79%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAAEGXXXXXXXXXX-----AMEDDDEMGAVEG-DAGTAAXXXXXXXXXXXXXXXXXXXXXMDSEEGSRDAMAEEGDAXXXXXXXXX-SSGAEEMEDLVGDEARAGRAAMTGXXXXXXXXXXXXXXXAVGAEAPIFARRDLPGVLSAATDQSQNIQPVVLPDSGAAVAPAGGGAAALGGVNCGVASGVPAAPPA 849 V +A+SPDPATIP TDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPA+NAEIQEGRIPPADTLDPA ITRNILADKPRVTRFPIDWNAAPGEAGAAA XXXXXXXXXX AM++DDEMG G D G XXXXXXXXXXXXXXXXXXXXX XXXXXXXXX SSGAEEMED+ GDEARAG AAM G XXXXXXX + VLSAA+D ++NIQP+VLP+SG+A A A AA V+CG A G+ AAP A Sbjct: 73 VLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAVNAEIQEGRIPPADTLDPAHITRNILADKPRVTRFPIDWNAAPGEAGAAAXXXXXXXXXXXXXXADGAMDEDDEMGVDNGVDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGAEEMEDVAGDEARAGTAAMRGAAXXXXXXXATPVAGGLSTR-----------VLSAASDPNENIQPIVLPNSGSAPASATQVAAVAEQVSCGKADGIAAAPAA 351
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A7S0FP47_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FP47_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.150e-26 Identity = 59/123 (47.97%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAAEGXXXXXXXXXXAMEDDDEMGAVE 369 V AD+PDPA+IP+ D++GVTV L+TC YK+REFIR+GYYVNNE+ DP + + P LD ++ R ILADKPRVTRF I W+ A E G + A +DD GAV+ Sbjct: 73 VLQADAPDPASIPNADILGVTVVLVTCSYKEREFIRIGYYVNNEYADP------YDPEVGPPSPLDIKKVVRTILADKPRVTRFNIPWDGAEEEKGPPPQQEAEGDVSMEVADDDDGLAGAVD 189
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A7S1C5P9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5P9_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.710e-26 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 19 PDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDW 264 PDP+ IP TD++GVTV LITC YK +EFIRVGYYVNNE + E+ EG PP D ++PA++ RNILA+KPRVTRFP+DW Sbjct: 79 PDPSRIPKTDVLGVTVVLITCSYKSQEFIRVGYYVNNEWGE-----ELAEGEAPPED-MEPAKVVRNILAEKPRVTRFPVDW 154
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A024TEU9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TEU9_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.930e-24 Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAA 297 V ++ PDP IP D VGVTV L+TC YK REF+RVGYYVNN++ DP + PPA +D ++ RNILADKPRVTRFPIDW APG GA A Sbjct: 73 VFQSEPPDPNNIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEN------PPA-VVDIHKLQRNILADKPRVTRFPIDW--APGATGAGA 162
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A3R8D5G5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R8D5G5_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.790e-23 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAA 297 V ++ PD + IP D VGVTV L+TC YK REF+RVGYYVNN++ DP + PPA +D ++ RNILADKPRVTRFPIDW APG GA A Sbjct: 73 VFQSEPPDSSIIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEN------PPA-IVDIHKLQRNILADKPRVTRFPIDW--APGATGAPA 162
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A6G0WHB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHB9_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.050e-23 Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNAAPGEA 285 V ++ PDPA IP D +GVTV L+TC YK REF+RVGYYVNN++ DP + P +D ++ RNILADKPRVTRFPIDW APG A Sbjct: 73 VFQSEPPDPAAIPEEDKIGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEN-------PPPVVDIHKLQRNILADKPRVTRFPIDW--APGSA 158
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A067BZQ2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZQ2_SAPPC) HSP 1 Score: 104 bits (259), Expect = 3.580e-23 Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDW 264 V ++ P+PA IP D +GVTV L+TC YK REF+RVGYYVNN+++DPA+ PPA+ +D ++ RNILADKPRVTRFPIDW Sbjct: 73 VFQSEPPNPALIPDEDKIGVTVVLVTCAYKGREFVRVGYYVNNDYSDPALVEN------PPAN-VDITKLARNILADKPRVTRFPIDW 153
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A1V9ZTB3_9STRA (Histone chaperone ASF1-like protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZTB3_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.590e-23 Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNAA 273 V ++ P+PA IP D +GVTV L+TC YK REF+RVGYYVNN++ DP + PPA T+D ++ RNILADKPRVTRFPIDW A Sbjct: 73 VFQSEPPNPALIPDEDKIGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLL------EAPPA-TVDITKLQRNILADKPRVTRFPIDWAPA 156
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A7S2UL69_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL69_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.550e-22 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHN--DPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDW 264 V AD+PDPA I DL+GVTV L+TC YK+REF+RVGYYVNNE+ +PA E PP + L+ +QI R ILAD+PRVTRFPI W Sbjct: 73 VLQADAPDPAQISKEDLLGVTVVLVTCSYKEREFVRVGYYVNNEYPGLEPAAPGEDPP---PPPNPLEISQIVRTILADRPRVTRFPIPW 159
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Match: A0A6A6CU07_9PEZI (Anti-silencing function protein 1 (Fragment) n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CU07_9PEZI) HSP 1 Score: 100 bits (248), Expect = 2.510e-22 Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 1 VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPADTLDPAQITRNILADKPRVTRFPIDWNA 270 V AD PD IP+TD++GVTV L++C Y +REF+RVGYYVNNE+ DP++N E PPA D +I RNILADKPRVTRF I W++ Sbjct: 73 VFEADPPDTKRIPATDILGVTVILLSCSYAEREFVRVGYYVNNEYMDPSMNEE------PPAKP-DFDKIRRNILADKPRVTRFQIKWDS 155 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9325.18326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9325.18326.1 >prot_L-elsbetiae_contig9325.18326.1 ID=prot_L-elsbetiae_contig9325.18326.1|Name=mRNA_L-elsbetiae_contig9325.18326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp VCSADSPDPATIPSTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAIback to top mRNA from alignment at L-elsbetiae_contig9325:5649..7786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9325.18326.1 ID=mRNA_L-elsbetiae_contig9325.18326.1|Name=mRNA_L-elsbetiae_contig9325.18326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2138bp|location=Sequence derived from alignment at L-elsbetiae_contig9325:5649..7786- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9325:5649..7786- >mRNA_L-elsbetiae_contig9325.18326.1 ID=mRNA_L-elsbetiae_contig9325.18326.1|Name=mRNA_L-elsbetiae_contig9325.18326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1716bp|location=Sequence derived from alignment at L-elsbetiae_contig9325:5649..7786- (Laminarionema elsbetiae ELsaHSoW15)back to top |