mRNA_L-elsbetiae_contig930.18300.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig930.18300.1
Unique NamemRNA_L-elsbetiae_contig930.18300.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: D7FRQ4_ECTSI (Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ4_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.860e-130
Identity = 219/273 (80.22%), Postives = 231/273 (84.62%), Query Frame = 1 
Query:   61 MEDEWYSGGDTAVPAGAGGAIAATAGAAK-RSPYGDSFTPPTSQGGL-AGQQAYGAPGASMGGYGAAAGGGLRXXXXXXXXXXXXXXXXXXXMSV-EDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            MEDEWYSG DT    G            + R+PYGDSFTPP+SQGG+ AGQQAYGAPGASMGG          XXXXXXXXXXXXX       ++ EDEEDY+NEPPLLEELGINFEHI SKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPI+LWKTTSVLGYCLLPVIGLAA+GIV DL+GN GHVL  VAVAWCT+SATRLFEEYL+MRRQRYLVAYPVGLLYACFVLITVY
Sbjct:   73 MEDEWYSGADTTDGTGXXXXXXXXXXXXQQRTPYGDSFTPPSSQGGIMAGQQAYGAPGASMGGXXXXXXXXXXXXXXXXXXXXXXXVGGGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A6H5JG11_9PHAE (Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG11_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.870e-128
Identity = 218/275 (79.27%), Postives = 229/275 (83.27%), Query Frame = 1 
Query:   55 PDMEDEWYSGGDTAVPAGAGGAIAATAGAAKR-SPYGDSFTPPTSQGGL-AGQQAYGAPGASMGGYGAAAGGGLRXXXXXXXXXXXXXXXXXXXMSV-EDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            P MEDEWYSG DT    G               + YGDSFTPP+SQGG+ AGQQAYGAPGASMGG          XXXXXXXXXXXXX       ++ EDEEDY+NEPPLLEELGINFEHI SKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPI+LWKTTSVLGYCLLPVIGLAA+GIV DL+GN GHVL  VAVAWCT+SATRLFEEYL+MRRQRYLVAYPVGLLYACFVLITVY
Sbjct:   73 PIMEDEWYSGADTTDGTGXXXXXXXXXXXXXXXTTYGDSFTPPSSQGGIMAGQQAYGAPGASMGGXXXXXXXXXXXXXXXXXXXXXXXVGVGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 347
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A835Z6H4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H4_9STRA)

HSP 1 Score: 248 bits (633), Expect = 4.100e-79
Identity = 116/172 (67.44%), Postives = 143/172 (83.14%), Query Frame = 1 
Query:  355 YDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            +DNEPPLLEELGINFEHI +KT AV++PT++I+  YLD+TDLAGPLVF L FG CLLL GK HFGYIYGFG FGC A ++VLNL+G++PI+ W+TTSVLGYCLLPV+ L+A+GI  DL G  G  LA  AVAW   +AT+LFE+YLDMR QR+L+AYP+GLLY CFVL+ ++
Sbjct:   54 FDNEPPLLEELGINFEHIWAKTRAVLVPTRRIESAYLDETDLAGPLVFALVFGTCLLLAGKLHFGYIYGFGAFGCGALSLVLNLMGDRPIDAWRTTSVLGYCLLPVVLLSAVGIALDLSGRVGLALAGAAVAWSCTAATKLFEQYLDMRHQRWLIAYPIGLLYCCFVLMAIF 225
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA)

HSP 1 Score: 223 bits (567), Expect = 8.820e-70
Identity = 103/173 (59.54%), Postives = 132/173 (76.30%), Query Frame = 1 
Query:  352 DYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            D+ NEPPLLEELGINF+HI  KTLAV++P K++    + D D+AGPL FCL  G CLLLTGK HFGYIYGFG+ GC+   ++LNL+ ++ I++++T S+LGYCLLP++ LAA  IV++LKG  G     V + WCTV+ATR  E  LDMR QRYLVAYP+ LLY+CF LITV+
Sbjct:    7 DFSNEPPLLEELGINFDHIWQKTLAVLVPVKELKQEIMVDADMAGPLFFCLLLGFCLLLTGKVHFGYIYGFGLIGCLGMYIILNLMSDRSIDIYRTASILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A7S2TR42_9EUKA (Protein YIPF n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TR42_9EUKA)

HSP 1 Score: 219 bits (557), Expect = 3.390e-68
Identity = 108/181 (59.67%), Postives = 133/181 (73.48%), Query Frame = 1 
Query:  334 SVEDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGE--KPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            S+ D  DYDNEPPLLEELGINF+HI+ KTLAV++PTK  D   + D D+AGPLVFCL  G CL+L  K HFGYIYGFG+ GC+    +LNL+ +  K I++++T S+LGYCLLP++GLAAL  V  LKG  G  L    V WCT++ATR  E  L MR QRYLVAYP+ LLY+CF LITV+
Sbjct:    4 SLSDLPDYDNEPPLLEELGINFDHIMQKTLAVLIPTKTPDHEIMIDADMAGPLVFCLLLGFCLMLRLKMHFGYIYGFGLIGCLGMYTILNLMSDPDKSIDIFRTISILGYCLLPIVGLAALSTVLSLKGYLGFGLTAFTVLWCTIAATRFVEATLGMRDQRYLVAYPLMLLYSCFALITVF 184
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A8K1CDX0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDX0_PYTOL)

HSP 1 Score: 215 bits (548), Expect = 2.670e-66
Identity = 105/179 (58.66%), Postives = 140/179 (78.21%), Query Frame = 1 
Query:  343 DEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIG-EKPINLWKTTSVLGYCLLPVIGLAALGIVWDLK--GNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            D+E+Y+NEPPLLEELGINF+HI  KT +V+LPTK+I+ + LDD DLAGPLV+C  FG+CLLL  K HFGYIYGFG+  C+   +++NL+  ++ I++++  SVLGYCLLP+IGLAA+ I   ++  G AG  LA VA+ W T +A+R FE+ L M  Q+YL+AYPVGL+YACFVLITV+
Sbjct:   44 DDEEYENEPPLLEELGINFDHIWLKTQSVLLPTKQINEHILDDADLAGPLVYCFVFGMCLLLAAKVHFGYIYGFGVLSCVFMYLLMNLLSPDRAIDIYRVCSVLGYCLLPIIGLAAINIFVSVQKLGLAGFALATVAILWSTHTASRFFEKALYMSEQKYLIAYPVGLVYACFVLITVF 222
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: W7U1N9_9STRA (Protein YIPF n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.670e-66
Identity = 108/175 (61.71%), Postives = 132/175 (75.43%), Query Frame = 1 
Query:  346 EEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            EEDY  EPPLL ELGINF+HI  KT  V++P   +D + +DD DLAGPL F L FG+ LL+TGK HFGYIYGFG+ GCIA  +VLNL+  K I++W+  S+LGY LLPVIGLA LGI   LKG  G  LA + +AW T ++TRLFE+ L+M +QRYLVAYPV L+YA FVLITV+
Sbjct:   80 EEDYSMEPPLLVELGINFQHIWEKTKTVLMPLGSMDEHIMDDADLAGPLFFLLSFGIFLLMTGKVHFGYIYGFGVSGCIAMYLVLNLLSPKDIDVWRVCSILGYGLLPVIGLAFLGIAVSLKGGVGQGLATLTIAWSTYASTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 254
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A1V9YZW9_9STRA (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW9_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.760e-65
Identity = 108/178 (60.67%), Postives = 139/178 (78.09%), Query Frame = 1 
Query:  346 EEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGE-KPINLWKTTSVLGYCLLPVIGLAALGIVWDLKG--NAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            EEDYDNEPPLLEELG+NF HI +KTL+V+LPTK+I+ N LDDTDLAGPLVFC  FG CLLL+GK HFGYIYGFG+FG      ++NL+   + I++++  SVLGYCLLP+I LAA+ IV  +KG    G +LA+++V W T +ATR FE+ L M  QR+L+AYP  ++Y+CFVLITV+
Sbjct:  152 EEDYDNEPPLLEELGVNFNHIWTKTLSVLLPTKQINENILDDTDLAGPLVFCFIFGTCLLLSGKIHFGYIYGFGLFGWAFMWAIMNLLSPTRTIDVYRVCSVLGYCLLPIILLAAINIVISIKGLNYVGFLLAMLSVIWSTHTATRFFEKALHMSDQRFLIAYPTAMVYSCFVLITVF 329
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: K3WQV6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQV6_GLOUD)

HSP 1 Score: 209 bits (533), Expect = 1.190e-63
Identity = 104/179 (58.10%), Postives = 136/179 (75.98%), Query Frame = 1 
Query:  343 DEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIG-EKPINLWKTTSVLGYCLLPVIGLAALGIVWDLK--GNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            D+EDY NEPPLLEELGINFEHI  KT +V+LP K+I+ + LDD DLAGPLVFC  FG+CLLL  K HFGYIYGFG+  C+   +++NL+  E+ I++++  SVLGYCLLP+IGLAA+ IV  +K  G  G  LA + + W T +A+R FE+ L M  Q+YL+AYP+ L+Y+CFVLITV+
Sbjct:   72 DDEDYSNEPPLLEELGINFEHIWLKTQSVLLPMKQINEHILDDADLAGPLVFCFLFGMCLLLAAKVHFGYIYGFGVISCLFMYLLMNLLSPERTIDIYRVCSVLGYCLLPIIGLAAINIVVSVKDLGLVGFGLASLCILWSTHTASRFFEKALYMTEQKYLIAYPIVLVYSCFVLITVF 250
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BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A0P1B150_PLAHL (Rab GTPase interacting factor, Golgi membrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B150_PLAHL)

HSP 1 Score: 209 bits (532), Expect = 1.390e-63
Identity = 105/180 (58.33%), Postives = 136/180 (75.56%), Query Frame = 1 
Query:  340 EDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIG-EKPINLWKTTSVLGYCLLPVIGLAALGIVWDLK--GNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 870
            ED +++ NEPPLLEELGINF+HI +KT++V+LPTK+I+ + LDD DLAGPLVFC  FG+CLLL  K HFGYIYGFG+  CI   +++NL+  E+ I++++  SVLGYCLLP+IGLAA+ IV  +K  G  G  LA V   W T +A+R FE+ L M  Q+YLV YP  L+YACFVLITV+
Sbjct:   65 EDTDEFANEPPLLEELGINFDHIWAKTVSVLLPTKQINEHILDDADLAGPLVFCFLFGMCLLLAAKVHFGYIYGFGVLSCIFVYLLMNLLSPERTIDIYRVCSVLGYCLLPIIGLAAINIVVSVKDLGMVGFFLASVCTLWSTHTASRFFEKALYMTEQKYLVMYPTMLVYACFVLITVF 244
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ4_ECTSI1.860e-13080.22Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JG11_9PHAE1.870e-12879.27Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835Z6H4_9STRA4.100e-7967.44Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S0DM30_9EUKA8.820e-7059.54Protein YIPF n=1 Tax=Amorphochlora amoebiformis Ta... [more]
A0A7S2TR42_9EUKA3.390e-6859.67Protein YIPF n=1 Tax=Lotharella oceanica TaxID=641... [more]
A0A8K1CDX0_PYTOL2.670e-6658.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7U1N9_9STRA3.670e-6661.71Protein YIPF n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A1V9YZW9_9STRA1.760e-6560.67Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=7... [more]
K3WQV6_GLOUD1.190e-6358.10Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1B150_PLAHL1.390e-6358.33Rab GTPase interacting factor, Golgi membrane prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig930contigL-elsbetiae_contig930:15083..22319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.7
Seed ortholog evalue9.4e-105
Seed eggNOG ortholog2880.D7FRQ4
Preferred nameYIPF4
KEGG koko:K20363
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005886,GO:0012505,GO:0016020,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0071944
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG5080@1,KOG3103@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-00_003430.1
Exons5
Model size875
Cds size873
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig930.18300.1prot_L-elsbetiae_contig930.18300.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig930 15083..22319 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817000.324902-CDS-L-elsbetiae_contig930:15082..153111622817000.324902-CDS-L-elsbetiae_contig930:15082..15311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 15083..15311 -
1691683973.2521563-CDS-L-elsbetiae_contig930:15082..153111691683973.2521563-CDS-L-elsbetiae_contig930:15082..15311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 15083..15311 -
1622817000.3366659-CDS-L-elsbetiae_contig930:16100..162071622817000.3366659-CDS-L-elsbetiae_contig930:16100..16207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 16101..16207 -
1691683973.270433-CDS-L-elsbetiae_contig930:16100..162071691683973.270433-CDS-L-elsbetiae_contig930:16100..16207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 16101..16207 -
1622817000.3477955-CDS-L-elsbetiae_contig930:17626..176981622817000.3477955-CDS-L-elsbetiae_contig930:17626..17698Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 17627..17698 -
1691683973.28296-CDS-L-elsbetiae_contig930:17626..176981691683973.28296-CDS-L-elsbetiae_contig930:17626..17698Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 17627..17698 -
1622817000.3577857-CDS-L-elsbetiae_contig930:18954..192091622817000.3577857-CDS-L-elsbetiae_contig930:18954..19209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 18955..19209 -
1691683973.294823-CDS-L-elsbetiae_contig930:18954..192091691683973.294823-CDS-L-elsbetiae_contig930:18954..19209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 18955..19209 -
1622817000.367947-CDS-L-elsbetiae_contig930:22109..223191622817000.367947-CDS-L-elsbetiae_contig930:22109..22319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 22110..22319 -
1691683973.3048723-CDS-L-elsbetiae_contig930:22109..223191691683973.3048723-CDS-L-elsbetiae_contig930:22109..22319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig930 22110..22319 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig930.18300.1

>prot_L-elsbetiae_contig930.18300.1 ID=prot_L-elsbetiae_contig930.18300.1|Name=mRNA_L-elsbetiae_contig930.18300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=291bp
SDTQVDAQLSTLALSLTGPDMEDEWYSGGDTAVPAGAGGAIAATAGAAKR
SPYGDSFTPPTSQGGLAGQQAYGAPGASMGGYGAAAGGGLRGGGGLGVGG
GGVGGGTVGGMSVEDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKI
DINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVL
NLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVA
WCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY*
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mRNA from alignment at L-elsbetiae_contig930:15083..22319-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig930.18300.1 ID=mRNA_L-elsbetiae_contig930.18300.1|Name=mRNA_L-elsbetiae_contig930.18300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7237bp|location=Sequence derived from alignment at L-elsbetiae_contig930:15083..22319- (Laminarionema elsbetiae ELsaHSoW15)
TCAGACACGCAAGTAGACGCACAATTATCAACCTTGGCTTTATCTTTAAC
AGGGCCAGATATGGAGGATGAGTGGTATTCGGGAGGTGACACCGCCGTGC
CGGCCGGAGCCGGCGGAGCGATTGCGGCAACGGCGGGTGCTGCGAAGAGG
AGTCCTTACGGAGACTCGTTCACTCCCCCGACCTCTCAAGGAGGGCTTGC
TGGCCAGCAGGTGGGTCTGTTTTGTTTGATGTACCGTGATGCGTTCGCAT
GTGAAGCTGGAAACGAATAGAAAAGTGGAGTTCGGAACGGGTGTGTGATC
TTCGGTGCGCCCACGGGGAAGCACCGAGCAGGCGCGGGGGGGGCAGGCGT
AGGCCTCCACCCCGACACACATATGTTCCCCCTTTTTACTCGTGGTCTTT
CTACTCCTCGAGCTGGCCGATTGCCCCAATTGTGTGACGGGGAAAGCGAG
AGAGAGACGGCCGCAACCCGGCGACGCGGCGCAACTACAGCAGTGTTGTG
GCAGAGGGCAGGTTTCGGTGTGAGTTAGAGGTTGTCTGTCGTCAAGGGCA
CCAACTGCTGTTGGTTCCAATTCGATTATCGGGCACATTTGAACATAGCT
GCTCACTGAGTTGTTTGTGTGGCGTTTAGAGGGGGGGGTGGTAAATGTTT
TAGTATTTTGCGGAAACGGCTACAAGAAGATTCCACAAGTTGGGGGGGGC
GGGGCAGACGTGCAGGCACGCTACTTTTGGCATGTTCTGGCGAGGCTTCG
GAGGTGCTGTGCCGCGAAAGGTACTGAAGTGCGGCTGTGCAGTCCCGCGC
GTGGCATCATCCGCGATTGCACTGCCCTTGTTTAAATGCGTGCAGATCGT
CGGTGCCTTCTTGCGTCTTACCTATACTCCAGCTGTAAGTGTATGTGGAC
AGGTGCCGAGCTGGTGTGCGCTGCCGCCTGCAATTACCTCAAGAGCGCCT
TCGGGTCCGTACCTTGATCGCGCCGACCGCTATCTCGCGTTTTCTCTGGA
GTATCAAATGTTCGCACCCATTATACAGGAGCCAGCAGCAAAAATTACAA
TCGTTGCAGGAAAATGTTGGCTGGTTGGAGCAGGCCCAAGCCGTTGTGAT
CATGAAGCGAAACGCAGCCTTTGGTTTTCGGCTATGTACAACAGTTGTAG
TTCTTTTCGTAGCTATCGTAGCGCCGGCACAGGTCGAATCGACAGTCGGC
GCCTAGCTTTCGATTGTGCCCCTCGTCCGTCGCCCATCTAGACTAGATGT
ATCCAAACAGCTGAGTGGGCCAGCAGTCCTCTCCGTGGACGCGTCGATCT
GGTGGTTCCTGGTTTTCTTAGCAACTCTACTACTGCTGTAGCTCGCGGAA
CGCCAGCGAGTCTCGCGGGGTGCCGGACCCTCGCCCCGCCTCGCCGTCAC
CACATCTACGGCCGCCCACGAGGAAGAGTCTATATGCGTGTATATGTAAA
GCACTTGCAGCTTCTGCAGCAGCTGGCTGTGCGTGCGAGGGCTGCCTCCT
GTGCTTTCGACTATTTAGGTACATCTATTTAGCTGTTCAGTAACAGATTA
CGGGAACTGCTGTGAGCAGCCCGGCTGTTTGAGATTTATGTCCCCTTCCG
CTTGAACAGCCCAAACAGCTGCTGTTGACAAACGTCAGTTGTCAGTTCAG
CTCTTTCCTGCAAACTTGCAGCGCGGTCTTTTTTTTCAACGTTCCGCCGG
CCAACGGCAAAAGACAGCCCTCCCTGTAAGGTTGAGAAGGCACGCACGCA
CAGCCCCCCCACTCGACAACTCTTCGCCTATCTCGACCACCTCGAGGTAG
CTGAAGGCGGGGAAAAAATCCTGCAAGGTTCATGGCACGCACGGTCGGTG
GTTTCGCTTCCTTAGGTGCAGGGTCTGTGGGCTGCTGGTTGCAAGTATTC
TAGCTGTTCCTATCTTGCTGTTTTTGAGCTGTTTTTCTTAAATTGCCTGG
CGAACACACACACACACACGCGGAGCCGGCGCAACGTTTTTTCGCCAGCG
TTTTTTTGTTTCTTTCCCCCGGTGTTCAACTATATTTGAAATCGTTGAAC
ACGCTCAGAGTCGGGCAGAGCAGCATGCAGGTATCGGACGCTTGGTCTGC
TCTCTTGCTTCTCCCTCTGGAGTGTTTATCCATGAGCAACGCCTGAAAGA
GAGCCTTGTACTTACATATGTACAGATGTATGTATAAAAGGTTTGGCCAC
TTACGCGGCCCCGCTTCATTGAGAGCGATTCCAAAGCAATGGTAAATATC
TATGTCCTGCAAGTGCGGGTGTTTGTCCAAAAGTTGTACAATGGAGTGTG
TGTCGGTGCGGGGATGGAAACACAAAACGGCAGTTGCCTTTTGAGCGTAA
AATGTATACTTCCGAATAGAGTGCACATAAAGGGTGTGCAACAAACCTGC
CCTCCTTGTATTTGACGGCTCTGCTGCGAGTGTACCCGTGTGCTCAACGA
TACGCATGTGTACATCGAGTACCTCGCAGGGTACCTACGTATTCAGCTCG
CGCATTTGACCCCTTCGGCGCGTTCACCATTCGCAAAAGCGGAGTTTCAA
GCAAGAGCCAAATTTCAAATTTCCAAAAAAATCCATGTGTAGAGTAGTTG
AGCGTGAGAGTTCATCGAGAGACAGGAGAGATATAAAGAGAGAGAGAGAG
ACGCAGACAGGCAGAGAGAGAGAGAGAGGTACGAAGTGGAGGAGACGAGA
ACGAGAAGCTTTGATGTGCAATAAAGGATGGAAGCCAACGAGGAGGTGCT
GATGTAGGGGTTGACATAAAGAGACGCGGGAAACGCAGGACGCCGCAGGA
AAAATTGCTACACTGTCAGGCAAGACATCTCTGGCCTCTCAGCAGTTTGT
TAAAAATCGTAAGAGATTTGTGTGTGGCAGTGTTTGATTCGGGCAACAGA
CCACACCATATCGTTACAACACGACCTTTGCATATGTACACCCACACCCC
CCCCCAAAAAAACAAAACACATCAAATACAAGAGCGTGCTCTCCCCTGCA
AAGACTTGCGGGCTACATGTAACGGTCTCATCGACAGACGAAAGCAAACT
ATCACGCGAGAATTTCCCATCCCAACCGCGCGCCCCCCTGCCTTTTTGTT
TTTTTGCCAGGCTTACGGGGCACCCGGCGCTAGCATGGGCGGCTACGGGG
CGGCAGCCGGAGGAGGGTTGCGAGGCGGCGGGGGGTTAGGGGTCGGAGGG
GGGGGCGTGGGAGGGGGCACGGTAGGCGGCATGAGTGTCGAGGACGAAGA
GGATTACGACAACGAGCCCCCACTGCTGGAGGAGCTGGGCATCAACTTCG
AGCACATCTTATCCAAGACCCTCGCGGTCATCTTGCCCACCAAGAAAATC
GATATCAATTATTTGGTGAGTCCAGTGATAAGGCGGGAAGTCGAATCCGT
TGTTCGTGTCAGATGGATGGGGAGACCGGTTTGGACTGCGTGGGGGGCTT
TCACTGCTGTGTCATAGCGCCGCTATTGTGTTTGTTCGGGGGCGTTACGC
GTGTGGATCGACCGGTCAGCTGGCTGTTGTGATACGCGCGTGGTTCGGTG
TTCAGGATTGAGCTAGTTTTTGCGAACAGTGTAGTCCAATAAGAGAAGAT
CTACAGGAGTAAGACGTTTGGGTAGGACTACCGGCCGAGGCAGGAGAACT
CATCCAGTCCAATACTGTTATCAAATGGTCTTAGTACGGAACAAGAATAC
AACAGCAGTAGTAAAAAATGGGTCGGGTAGGGCTGAAACCGGCACGGATA
CATACGGCCAAAACTGCGGAGCTCCCAATGACTGAAAAATAGAGCCCTGC
TGATCATTCTCTTCCAAGCTTCCCCTTACAAACGGAATAAAACACGCGAG
AAGGATCATTCGAGACCACCCCGCCCCCCGCCCTTTATATTAGGGGCCGG
CCGTACATATGACACAGCCAACGCTTTGGGGGAACTGCCACGGCGGTTGA
GTCCTGTTTTTTGTCTCGCTGTTTTGCCTATTTTGCTCACGGCGCTGGGC
GGGGGGGGTGCGCTGACGCCAGCTTCACGATGGTGTTTGAACTCGAACAA
ATTCCAGAAACGCAACTGTTCTCGCAGAGCAAAATGGTCGGGGCACACAC
GCGGAATGTCACACCTTGTCTCAATCTCTCGTTGGGCTTATTTAGCCTTA
TTTTCTTCAGAATGTTCAATTGAATGCACCGCCGCGGGTGATGGGCGGGT
GAATAGCGCGTGAGTTCGAAGTAGTGCCGCCGAAGTGCCAAAGGTGAGAG
TGGCCTGTAGTACAGGCCACCAACAGGATGATATGCGAAGCCAGCTTGCT
TTGCCTTGCAGGGGCGGTCTGGCCTTTGGCTTACTGGCTTCCGATTGCCG
AGCGACCAGCTCAGGGGGTTCTCTGCTGCTGTAGTGCGCCGTTGGGGTGA
AAGCATGTACTAAGATGGACTACACAGCGCAAATTTAGCCTGTGTCCACG
GGGATTGATCCGCATCAAGTGTTGGGTTGTCACGGACACAGGGAGGTACT
GGGTGGAGAGATCGGAACGGTTTTTAATGTGAAGAAACAACAACAACAAC
AACAACAACAACAACACAGCAGCGCTGACGATTGTGCTTGCCTTTGCTCA
CCGACCCCCCTCTTCCAACAGGATGACACCGACCTCGCTGGCCCGCTGGT
GTTCTGTCTTTGCTTCGGGCTGTGCCTTCTCTTGACGGGAAAGGTGAGAG
ACACGCAACATACATATATATGCCGCGGTGTGTTAAGGCGCGGAGGAACT
TGTTGGGGCCTCCCCCCCCCCCCCCCTGAAATCCACGGACGCGCAAACAG
TTGCCTCGTTTCGCAGAAGCACGGAGCACATACATATGTGCTCGAAAATT
GACGAACAACGTCCGGTTGTTACATCGAAGGGTTAACGAAACGAAAGCAA
GCGCTACTGGCGTCGAGTTTACCCACGTTCTTGCGCCGTTGGCACTACTG
TAATATATACGGTGTTACCCGTGAACTCTCAAGCTTTTAGATCTTGGAAG
TAGGTCAAGACGCCATGACATGCGACTCCTGGCAGCGACGGTCCGATGAG
AAAAGCGTACCAATTGAGATGATAATAAAGCATCAAATGCTGGTGCGGTG
GGCCTGTGCAGCTTCAGCGTGTGCGCAGAAAACGATAGAGGGTGTACTGG
TATGTACGTACCTCCAGAAGCAGTACATGCTTGAAGCGATGGGAGCGATA
CGTCGCAAGTCTGAAATTTTTTGCAGGGTGTGAGTCTGTGTCTTAAAAAA
GTTGTTCTTGCGGGCGGAGGAGACCACGCCAGCAGGCGGAGGAGACCACG
CCAGCAGGCGGAGGAGGAGAGGCACGCAGCTGGCGGCCGGCAGACTTGGG
TGTACTCGAAATAGAACCCGTGCCGAGCATGACACTATTATAAGCCTGTA
TGGTATTTGTGTACATTTAGCGTCTTGCTCGATCCAAGCGGAGGAACGTG
CCGGCGTTTTTTTTTTTTTCCTCTCATCATCGGCATATTTGTCGTCTGCC
CCACTGGCCCCCTCCCTCCACTACGACTAGCTAGACGACCCAACCGGGGT
CACTGGCCATGTGGCCCGCCGGTGATCGACTTGAAATGGTGCCTTGGTGC
CGATGTTGCCCCCACAAGAGGTCGTCAACCTGCCGGCCAGCGTAGCTTGT
TTGCCGCCCTCCCCCCTCCGCTTGTTCTCATGCTGTTATTTGCCAACGAA
AAAAGAAGGAAGCCCGGGTGTCTACCCCTATATACCCCCTCCTGTGTCTC
CCGCCTGGTAGTTGGAGAGATGCCCAAAAAGAGGTGATGGAAAGTGTGCC
AGAATACATAGATGGGGCGAGAAAAAAAAGGGCGAGTCAACTGTTATCTC
GCTCACCTTTGAAAGATAGGCAGATAATCAAAAATGGAACCTAACCCACA
TTGGAGACGGGACTCCCGTGATAATTTTCGGTATTCCATATAGTGACGTA
ATATTGGGCCGGCCGAGTAGAAAAACACCTAAAATATTAAGGAGTAGAAG
ATTCAACATCTCCCCTGCAGTTCTCTGCCAGGTCAAACAACATGTACCTT
TCACCCCTGCCCTTGACCGTTAGTATGTGCCTGATCTCTCGTCAACATCG
ACTGACGCGCAGCCGCACTTTGGGTACATCTACGGCTTCGGGATGTTTGG
GTGCATCGCGACGGCCATGGTGCTCAACCTAATCGGAGAAAAGCCGATCA
ATCTCTGGAAAACCACAAGGTGCGTGGGCTTAAAATCCCCCCCTCCCCCC
CCCCCCCTCGGCGTAGAGTACTTGCCTGCTCAGTGCCTCCGGCCTGCCCT
TTCCCAAAACCGCGCTGGCAGGCCTTTGGGGGGGGGGGGGCGGATTTTGC
GTTGTCTGCGTACCAGTTGGTTTCGTAAGCTGCCACACTCGTCGGTGGTC
AAGAAGGACGGTAGCCGCTAGTGAGATTGGACGCAGTCAGGAGAGAGGGA
GAGGGTTCCTTGTTGCAAGTTGCGCTGTGGCATCATTGCCTGTTGCCTCC
GTCGATCTATTGAACCGATTGGCGAAAAGTGCTGGCCCTGGTTCGCGTTG
ATGACTTTCATTTATCTCGCTACCGTCGTGAATGGAAGTATAGTATATAC
GTGCACGGGGCGCATGGGCGGCTGCACTGATGTGCTGAGCGCGCCCGCCC
CGTCCAGCAGGGAGGAATCTACACATGGCAGGCGTGTGTAGATTCTCGGT
AAATTGGTGCGCGCCAATGGAGTACATATGTATCCGACGAGTTTCCGTGT
GTACAGTGTAGGGTTTGGTTTCCAAACAGGTGGTGTTTAGTCAACGTGCG
CGCCAGCACGAGTCGGCTGATGATGTGACATCGTTCGCGGTTGCCCCGAC
TCGGAGAACACAAGAGGAGTTGCCGCGGCAGTCGACAACCCTGATAAAAC
TGATCAACCCAAAAGCCTCTGAACGTCCCGACTTTTTGTTTGTCCGCCGC
TCCGCCCCTCTCTCTCCCCCCACCCCCTCGACCAAAAAAATCGATACCAA
AACGACAGTGTTCTGGGGTATTGCCTCTTGCCGGTGATAGGCTTGGCCGC
GCTGGGGATTGTGTGGGACCTCAAGGGCAACGCGGGGCACGTGCTGGCGC
TGGTGGCGGTGGCCTGGTGCACCGTCTCGGCTACGCGGTTGTTCGAAGAG
TACCTCGACATGAGAAGACAGCGGTACCTGGTGGCTTACCCCGTGGGGCT
GCTGTATGCGTGTTTCGTTTTGATCACCGTGTACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig930:15083..22319-

>mRNA_L-elsbetiae_contig930.18300.1 ID=mRNA_L-elsbetiae_contig930.18300.1|Name=mRNA_L-elsbetiae_contig930.18300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1746bp|location=Sequence derived from alignment at L-elsbetiae_contig930:15083..22319- (Laminarionema elsbetiae ELsaHSoW15)
TCAGACACGCAAGTAGACGCACAATTATCAACCTTGGCTTTATCTTTAAC
AGGGCCAGATATGGAGGATGAGTGGTATTCGGGAGGTGACACCGCCGTGC
CGGCCGGAGCCGGCGGAGCGATTGCGGCAACGGCGGGTGCTGCGAAGAGG
AGTCCTTACGGAGACTCGTTCACTCCCCCGACCTCTCAAGGAGGGCTTGC
TGGCCAGCAGTCAGACACGCAAGTAGACGCACAATTATCAACCTTGGCTT
TATCTTTAACAGGGCCAGATATGGAGGATGAGTGGTATTCGGGAGGTGAC
ACCGCCGTGCCGGCCGGAGCCGGCGGAGCGATTGCGGCAACGGCGGGTGC
TGCGAAGAGGAGTCCTTACGGAGACTCGTTCACTCCCCCGACCTCTCAAG
GAGGGCTTGCTGGCCAGCAGGCTTACGGGGCACCCGGCGCTAGCATGGGC
GGCTACGGGGCGGCAGCCGGAGGAGGGTTGCGAGGCGGCGGGGGGTTAGG
GGTCGGAGGGGGGGGCGTGGGAGGGGGCACGGTAGGCGGCATGAGTGTCG
AGGACGAAGAGGATTACGACAACGAGCCCCCACTGCTGGAGGAGCTGGGC
ATCAACTTCGAGCACATCTTATCCAAGACCCTCGCGGTCATCTTGCCCAC
CAAGAAAATCGATATCAATTATTTGGCTTACGGGGCACCCGGCGCTAGCA
TGGGCGGCTACGGGGCGGCAGCCGGAGGAGGGTTGCGAGGCGGCGGGGGG
TTAGGGGTCGGAGGGGGGGGCGTGGGAGGGGGCACGGTAGGCGGCATGAG
TGTCGAGGACGAAGAGGATTACGACAACGAGCCCCCACTGCTGGAGGAGC
TGGGCATCAACTTCGAGCACATCTTATCCAAGACCCTCGCGGTCATCTTG
CCCACCAAGAAAATCGATATCAATTATTTGGATGACACCGACCTCGCTGG
CCCGCTGGTGTTCTGTCTTTGCTTCGGGCTGTGCCTTCTCTTGACGGGAA
AGGATGACACCGACCTCGCTGGCCCGCTGGTGTTCTGTCTTTGCTTCGGG
CTGTGCCTTCTCTTGACGGGAAAGCCGCACTTTGGGTACATCTACGGCTT
CGGGATGTTTGGGTGCATCGCGACGGCCATGGTGCTCAACCTAATCGGAG
AAAAGCCGATCAATCTCTGGAAAACCACAAGCCGCACTTTGGGTACATCT
ACGGCTTCGGGATGTTTGGGTGCATCGCGACGGCCATGGTGCTCAACCTA
ATCGGAGAAAAGCCGATCAATCTCTGGAAAACCACAAGTGTTCTGGGGTA
TTGCCTCTTGCCGGTGATAGGCTTGGCCGCGCTGGGGATTGTGTGGGACC
TCAAGGGCAACGCGGGGCACGTGCTGGCGCTGGTGGCGGTGGCCTGGTGC
ACCGTCTCGGCTACGCGGTTGTTCGAAGAGTACCTCGACATGAGAAGACA
GCGGTACCTGGTGGCTTACCCCGTGGGGCTGCTGTATGCGTGTTTCGTTT
TGATCACCGTGTACTGATGTTCTGGGGTATTGCCTCTTGCCGGTGATAGG
CTTGGCCGCGCTGGGGATTGTGTGGGACCTCAAGGGCAACGCGGGGCACG
TGCTGGCGCTGGTGGCGGTGGCCTGGTGCACCGTCTCGGCTACGCGGTTG
TTCGAAGAGTACCTCGACATGAGAAGACAGCGGTACCTGGTGGCTTACCC
CGTGGGGCTGCTGTATGCGTGTTTCGTTTTGATCACCGTGTACTGA
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