mRNA_L-elsbetiae_contig930.18298.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: D7FRQ2_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ2_ECTSI) HSP 1 Score: 293 bits (751), Expect = 1.620e-96 Identity = 142/168 (84.52%), Postives = 158/168 (94.05%), Query Frame = 1 Query: 1 MLRTALKAGVGCIPRRAVSGSSAASVQAGSRKLSSLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGDLYAPGASRLACQIKVSKEIDGITVFIPDGPPVG 504 MLRTAL+ GVGC+PRRA SG + +S QAG R LSSLQEALVKVTF+DAEGDRETV ALPGQ+IFEVA+KHEIALDGPCRGKA AVQSRNSESWTEDLFGQGPVCASCHVM+TKEFT+KIEPPL+SEISLLERKG+LYAPG+SRL CQIK+S+++DGITVFIPDGPPVG Sbjct: 1 MLRTALQTGVGCLPRRAASGGAVSSAQAGRRALSSLQEALVKVTFVDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKAGAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTEKIEPPLDSEISLLERKGELYAPGSSRLGCQIKLSRDLDGITVFIPDGPPVG 168
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A835YRA1_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA1_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.600e-36 Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = 1 Query: 91 RKLSSLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGD-LYAPGASRLACQIKVSKEIDGITVFIPDGPPV 501 R +S++ + V +TF+D EG R+TVP L GQSI+EVA H+IALDG C G R ++ + ED +G GP C +CHVMI E+ K+ E E L+ GD LY PGASRL CQ+++SK +DG+ V+IPDGPPV Sbjct: 17 RAMSTVADKSVTITFVDLEGVRKTVPGLVGQSIYEVAKLHDIALDGACGGGGMPKYIRRTDVFLEDEYGAGPQCNTCHVMIPDEWYGKLNEVFECEQEQLDDIGDNLYVPGASRLGCQVRLSKALDGMVVYIPDGPPV 154
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A4D9CXE6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXE6_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.900e-31 Identity = 65/139 (46.76%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 91 RKLSSLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKI---EPPLESEISLLERKGDLYAPGASRLACQIKVSKEIDGITVFIPDGPP 498 R L+S+++ V VTFI+ EG R TVP GQS+ +VA H+I L+ C G Q ++SE WTEDLFG+GP C CHV I + + I +P E E LLE A SRL CQ+ ++K +DG+ VFIPDGPP Sbjct: 41 RTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPP 179
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A7S2V0K6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0K6_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.260e-28 Identity = 59/138 (42.75%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 97 LSSLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEP-PLESEISLLERKGDLY--APGASRLACQIKVSKEIDGITVFIPDGPPV 501 LS++ + V VTF+ +G R TVP L GQ++ +VA H++ LDGPC G V++ +E WTE +G+GP C C V++ E+ + I+ PL E ++ G+ SRLAC IK++KE+DGITV +PD PPV Sbjct: 24 LSTVAQKTVHVTFVAHDGSRSTVPGLEGQTVMDVARMHKLDLDGPCNGGGHEVETYRNERWTEPQYGEGPQCGHCRVLVPDEWGNAIDSRPLYEEKAMNRLWGNAREGVGRQSRLACMIKLTKELDGITVVVPDAPPV 161
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A7S2CG69_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG69_9STRA) HSP 1 Score: 100 bits (250), Expect = 9.530e-22 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 103 SLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGDL-YAPGASRLACQIKVSKEIDGITVFIPDGPP 498 S+++ V+V F+ EG+R TVP L G SI EVA H I + G A V +S++WTEDLFG+GP H+MI+ KI P L +E+ LL D SRL+C + +SK++DG+TV++PD P Sbjct: 40 SVEDITVQVNFMTEEGNRTTVPGLEGMSIHEVATMHNIDIGHQLCGSA--VNKIHSDTWTEDLFGEGPQLGFDHIMISPADQAKIPPRLPTELELLRGVWDEDEISDNSRLSCMVVLSKDMDGMTVYVPDRVP 170
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: I3WER2_BLAHN (Ferredoxin n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=I3WER2_BLAHN) HSP 1 Score: 98.2 bits (243), Expect = 6.890e-21 Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 121 VKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGDLYAPGASRLACQIKVSKEIDGITVFIPDGPP 498 + +TFI EG+ + V A G ++ E A+ +++ L G C G + +E WTE+ FG+GP C+ CHV++++E ++ + P E + +E K + SRLACQI V+KE++G VFIP P Sbjct: 34 IDITFITPEGESKPVKARIGDTLLETAEAYKLPLCGDCHGNGLPRAVKRTEGWTEETFGEGPSCSFCHVVLSRELSEVVPKPCAEEETFIE-KIPIGKTERSRLACQISVTKEMNGGVVFIPHHVP 158
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A6U3AU55_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3AU55_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 1.250e-19 Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 121 VKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGDLYAPGASRLACQIKVSKEIDGITVFIPD 489 +K+T+++ GDR TV GQ++ +VA H I L GPC G + +ED +G+GP C C V I KEF DK+ P EI +L+ D A SRLACQ+ +S++ DG+TV +P+ Sbjct: 27 IKITYVNTAGDRVTVDGKAGQNLLQVARDHNIDLYGPCNGGGQS---------SED-YGEGPCCTECRVFIAKEFQDKVNPINGEEIEILDWCED--ADENSRLACQVVLSEDCDGMTVALPE 137
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: D8LUY5_BLAHO (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LUY5_BLAHO) HSP 1 Score: 94.4 bits (233), Expect = 1.800e-19 Identity = 47/133 (35.34%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 100 SSLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGDLYAPGASRLACQIKVSKEIDGITVFIPDGPP 498 S++ E + +TFI +G+ +TV A G ++ + A+ + + + G C G + +E+WTE+ FG+GP CA CHV+ + E + +E P E+ +E+ P SRLACQ+ V+KE++G FIP P Sbjct: 27 SAVAENTIDLTFITPKGESKTVKARIGDTVLDTAEAYGLPICGDCHGAGLPRAVKRTENWTEETFGEGPSCAFCHVVPSLELSKVLEKPTAQELEFIEKIPIGKTP-RSRLACQVPVTKEMNGGVFFIPHHVP 158
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A7S2P9R0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P9R0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 8.490e-19 Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 1 Query: 88 SRKLSSLQEALVKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSR-NSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERKGDL--YAPGASRLACQIKVSKEIDGITVFIPDGPP 498 S + S+ + VK+ F+D EG R+TVP GQ+I +VA H I + GPC V SR NS++WTEDL+G+G HV++ + D SE+ +L D +P SRLA + V+K+++G+TVF+PD P Sbjct: 33 STNVPSVADVTVKLNFVDYEGKRQTVPGRIGQTIHDVATMHGIEV-GPC--SVGGVVSRVNSDTWTEDLYGEGATSGYDHVLLVGKGADSANVKCVSEVEMLNEYWDSEDISPN-SRLASMVVVNKDMEGMTVFVPDALP 168
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Match: A0A8J2S9F8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9F8_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.070e-17 Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 121 VKVTFIDAEGDRETVPALPGQSIFEVADKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMITKEFTDKIEPPLESEISLLERK-GDLYAPGASRLACQIKVSKEIDGITVFIPDGPP 498 V +TF+D EG R VP G ++ EVA+ H I + GP A V+ NS+ WTEDLFG+G HV + + K+ P E+ LL D SRL Q+ ++KE+DGI ++IPDG P Sbjct: 52 VHITFVDHEGSRAVVPGRVGMTVSEVAELHGIDI-GPT-AVAGVVERVNSDVWTEDLFGEGASLGYDHVKVPPAWAAKLPPRGAWELELLRNYWDDDDITSVSRLGSQLPLTKELDGIQIYIPDGIP 176 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig930.18298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig930.18298.1 >prot_L-elsbetiae_contig930.18298.1 ID=prot_L-elsbetiae_contig930.18298.1|Name=mRNA_L-elsbetiae_contig930.18298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp MLRTALKAGVGCIPRRAVSGSSAASVQAGSRKLSSLQEALVKVTFIDAEGback to top mRNA from alignment at L-elsbetiae_contig930:5677..9972- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig930.18298.1 ID=mRNA_L-elsbetiae_contig930.18298.1|Name=mRNA_L-elsbetiae_contig930.18298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4296bp|location=Sequence derived from alignment at L-elsbetiae_contig930:5677..9972- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig930:5677..9972- >mRNA_L-elsbetiae_contig930.18298.1 ID=mRNA_L-elsbetiae_contig930.18298.1|Name=mRNA_L-elsbetiae_contig930.18298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig930:5677..9972- (Laminarionema elsbetiae ELsaHSoW15)back to top |