mRNA_L-elsbetiae_contig9284.18288.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9284.18288.1
Unique NamemRNA_L-elsbetiae_contig9284.18288.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: D8LGP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP0_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 2.310e-65
Identity = 127/311 (40.84%), Postives = 153/311 (49.20%), Query Frame = 3
Query:  237 MTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQH 1169
            MTIR+IM+PPKGDL+  G++VGYG+DEWR G    +G   P +LDE+RYRIATGGY  ALR SPG A+SC++FTV RHP NR+VSAY +CR+P+HSWDPL ASSV                                                                                                                   LLRDN  A+GVVE+F   M LFD AGV PG  WAA Y+KLG ANKNEA +TE     RHAL+S ++K YLRL ILLYDHA+ VFH++  QH
Sbjct:    1 MTIRKIMHPPKGDLDGGGNIVGYGTDEWRQGHALIEGVYVPNLLDEQRYRIATGGYVEALRRSPGVAESCQYFTVSRHPANRVVSAYYYCRNPRHSWDPLHASSV------------------------------------------------------------------------------------------------------------------KLLRDNSKAVGVVEEFDSKMALFDRAGVTPGTRWAATYRKLGVANKNEAPDTEQSTAPRHALLSEEIKPYLRLAILLYDHAMVVFHDLTRQH 197          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.540e-51
Identity = 136/401 (33.92%), Postives = 193/401 (48.13%), Query Frame = 3
Query:   30 RPPPRRRGGKALRTLLRSPLSVRSPISLA--LLLCL--AALCAVLLARPKVGEGPPPAVPG------------CWVFQHLHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPG-----PAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQH 1169
            RPP R   G+  R     P S  S   L   LLLCL      A +L RP   E  P   P             CW+F HL K+GG T++R++    G      +   Y S +W+ GQG+ + ++A  +     +  A GGY  ALR +P          C++FTVFRHPV+RLVSAY +CR      D LCAS  V +  V LV FA HWGN+A RQ A+ FV  D V  ++    G G +   L    V+ +P WY+LKL+L  R   SG                     DT  +   L  +   + +LLRDN+  +G++ED+  ++ LFD A  +PG  W   +++ G  N +   + E    L+ AL   ++ K+L LD+ LY  AV +F+   H +
Sbjct:   17 RPPKRVTDGQ--RQAAARPPSFTSKCLLGGGLLLCLLYGGHHAHVLPRPDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLLFDSWGS-----ESTTYDSYQWKKGQGYAE-SVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPS--DQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMG--LTAEQVELMPGWYMLKLFLNDR---SGVAD------------------DTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSY 384          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.780e-50
Identity = 115/320 (35.94%), Postives = 170/320 (53.12%), Query Frame = 3
Query:  201 CWVFQHLHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAAN---KNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFH 1151
            CWVF HL K GG T++ ++    G   +      Y S++W+LG          ++   + + +  GGYT ALR S      C+FFT+FRHP+ R+VSAY +CRS     D  CAS VVDA  V L+ FA+HWGN+A RQ A+ FVP+D V  Y+     +      L+   +  +  WY LK+YL  R  +              ++DA          +A L  L+    +L+R  + A+G++E +  ++ LFD A  +PG  W A + + G      KN+  E+E   TL+ A   +++KKY+RLD+LLY+HAV VFH
Sbjct:  156 CWVFMHLQKCGGSTVKYMLRRSYGSRYSI-----YDSNQWKLGDDI-SANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLG--DAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQA-----LHDFDLKKIAGWYQLKMYLE-RPEKGDWGVPGQSEAMTVEHDAAATL------EAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESE---TLKQAWTDSELKKYMRLDLLLYEHAVDVFH 452          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.220e-49
Identity = 120/330 (36.36%), Postives = 166/330 (50.30%), Query Frame = 3
Query:  186 PAVPG-CWVFQHLHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAG-DYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQH 1169
            PA PG CWVF HL K GG T++ ++    G          Y S  W+ G  F     A   L +K + + TGGYT ALRLS      C+FFT+FRHP+ R+VSAY +CRS   S D  CAS V+ A  V L+ FA+HWGN+A RQ A+ FVP+DDV  Y                           LK+YL     + G        + A  D  AT         DA L  L+    +L+RD + A+G++E +  ++RLFD    +P   W   + + G  + +  ++     TL+ A   +++KKY+RLD+LLY+HAV VFH     H
Sbjct:  171 PASPGQCWVFMHLQKCGGSTVKDLLEDRWGSR-----FFIYDSMRWKFGDEFSAKFGAKLALGDK-WNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSV--SGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQ--------------------------LKMYLERPQKEDGGVLGQREAMTAHQDAAATP--------DAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSH 458          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 3.540e-44
Identity = 116/333 (34.83%), Postives = 175/333 (52.55%), Query Frame = 3
Query:  174 EGPPPAVPGCWVFQHLHKSGGMTIRRIMNP---PKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEAS-ETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMV 1160
            E  P +   CWVF H++KSGGMT+R+++ P    KG   A  D +     EW  G+ + +  +    +         GGYT  LR+     + CK+FTVFRHPV+R+VSAY +C+   H  D LCA+ V+DA+ V L+ FAEHWGNY  RQ A++ + A+DV  + +E V E    A  +G +   +P+WY  K YL H  HQ                   D+       ++ L+  + S Q  L   + A+G++E++  SM LF+    +    W   ++K G  N   +  ET   + L+ A  S ++KK++ LDILLYDHA++V  + V
Sbjct:   43 ELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDI-----EWSSGRSYAETFVKENAV------FTYGGYTEGLRMYDD--RDCKWFTVFRHPVSRVVSAYFYCQRAHH--DQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDV--FHNEVVSEFCQQARGHGDVC--IPAWYRQKHYL-HLPHQ-------------------DDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQV 336          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.020e-34
Identity = 106/327 (32.42%), Postives = 165/327 (50.46%), Query Frame = 3
Query:  219 LHKSGGMTIRRIMNPPKGDLEADGDVVG-YGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPA-KSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAAT--VGLVGFAEHWGNYATRQMAMSFVPADDV----VRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRY--HQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQH 1169
            ++K+GG T++ ++ P     +A    VG Y S +W  G+ F     A   L ++   +  G YT  LR   G   + CK+FT+FRHP+ RLVSAY +C+  K   D LCA+  +DA      L  FAEHWG++  RQ A++FV  +++    V+Y D T    G+    +G      P WY LKLYL+ +    + G       G  A    A           A +S L+  +Q LL + + A+GV+E +  S+ LF++A  +PG  W   +  +G  N +     E    L  +     +++YL LD+LLYD+AV+V +  V ++
Sbjct:    1 MNKAGGSTVKYMLAPW---TKAQNVTVGLYDSPQWLEGKDF-----AQDFLGDENS-LMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCK--KKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKY-DAT----GICTPYHGKR--SCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGA-----------ATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKY 298          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 2.320e-32
Identity = 96/334 (28.74%), Postives = 160/334 (47.90%), Query Frame = 3
Query:  189 AVPGCWVFQHLHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEW--RLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQHS*SLD 1184
            + P CWVF H +K+GG T++  +   +   E+  + V     +W  R  +G +D      +L++K   IA GGY   LR S    + CK+FT+ RHP+ RL+SA+ +C       D LCA+++       +  FA+HWGNYA  Q A+  V   ++  + +E                 D P+W+  KLY   R    G               AT+ +         +  ++  ++ LLR N+ A+G++E +  SM LFD A  +PG  W  A   L +  K++    E  A L  A+    +++Y+ LD+LLY++A ++    + ++  +LD
Sbjct:   33 STPTCWVFTHNNKAGGTTVKTHL---RNYAESRNETVALCHSDWYARGDKGIQD------LLNDKPVLIA-GGYAEGLRTSA--FQGCKWFTMMRHPIARLISAFYYCSGGNR--DQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEI--FAEEV----------------DAPAWFKAKLYFEGRLGYPGNMST-----------ATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASL-SPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLALD 322          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 8.820e-27
Identity = 102/338 (30.18%), Postives = 152/338 (44.97%), Query Frame = 3
Query:  153 LARPKVGEGPPP---AVPGCWVFQHLHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCRSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDV--PSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFN--DDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATLRHALVSNDVKKYLRLDILLYDHAVAV 1145
            LA   VG   P    + P CWV+  ++K+GG +IRR++   K    A    VG    E+   Q         QILD +R  +  G YT  LR        CK+FT+ RHP+ RLVSA+ +C       D LCA+ +       +  FAEHWGN+   Q A++F   +D+                    LV +V  P WY  KLY   R   SG               +T  +I T +   +  +  ++  ++ LLR  + A+G++E +  SM LFD A  +PG  W +        N +++        L  ++    +K+ L LDILLY+HA +V
Sbjct:   18 LAAANVGSDSPELSLSPPACWVYTDMNKAGGTSIRRMI---KDYAAATNTTVG----EFTHTQYNAGDRGVQQILD-RRPSLIWGAYTEGLR-PYATVLGCKWFTMVRHPIARLVSAFNYCGIVPS--DQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDI--------------------LVTEVKSPPWYKAKLYFEGRLGPSGKT-------------STSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND--LLVASMTDPVLKQILWLDILLYEHACSV 309          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.120e-25
Identity = 96/327 (29.36%), Postives = 144/327 (44.04%), Query Frame = 3
Query:  201 CWVFQHLHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WC-RSPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETE----GGATLRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQ 1166
            CW+F H+ KSG    RR+        E   D V     +WR G GF    +A        +++  GG   +LR      +SCK+ T+FRHP+ RL+SAY  C  +PK   DP+C  +     + GLV FAE WGN+A RQ A+  V    V  +  +     G               WYL+K YL               GI                +D  L  ++  ++ LL   + A+G+ ++   +M LF  A  + G  W++++  LG  N+    ++E         R AL +  +   LRLD+ LY+HA+ VF + V Q
Sbjct:  273 CWIFMHMDKSGASGARRVATERWRKDELVFDTV-----QWRRGDGFAADVMA------SHWKLLHGGCVESLRNHK--ERSCKWLTIFRHPIARLLSAYHHCLEAPK---DPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTG------------TSMWYLVKEYLAR------------GGIA---------------EDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGI-NEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQ 539          
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 6.570e-25
Identity = 95/321 (29.60%), Postives = 142/321 (44.24%), Query Frame = 3
Query:  219 LHKSGGMTIRRIMNPPKGDLEADGDVVGYGSDEWRLGQGFRDGTLAPQILDEKRYRIATGGYTGALRLSPGPAKSCKFFTVFRHPVNRLVSAY*WCR-SPKHSWDPLCASSVVDAATVGLVGFAEHWGNYATRQMAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRYHQSGXXXXXXXGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFTAIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGAT----LRHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQ 1166
            + KSG    RR+        E   D V     +WR G GF    +A       R+++  GG   +LR   G  +SCK+ T+FRHP+ RL+SAY  C  +PK   DP+C  +     + GL  FAE WGN+A RQ A++ V    V  +  +     G               WYL+K YL               GI                +D  L   +  ++ LL   + A+G+ ++   +M LF  A  + G  W++++  LG  N+ +  ++E   T     R AL +  +   LRLD+ LY+HAV VF + V Q
Sbjct:    1 MDKSGASGARRVATEQWRKDELVFDTV-----QWRRGDGFAADVMA------SRWKLLHGGCVESLRNHKG--RSCKWITIFRHPIARLLSAYDHCLGAPK---DPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTG------------TSMWYLVKEYLAR------------GGIA---------------EDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGI-NEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQ 261          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9284.18288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LGP0_ECTSI2.310e-6540.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI1.540e-5133.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWQ3_ECTSI1.780e-5035.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI1.220e-4936.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE3.540e-4434.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI5.020e-3432.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JNJ0_9PHAE2.320e-3228.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE8.820e-2730.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE1.120e-2529.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI6.570e-2529.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9284contigL-elsbetiae_contig9284:4935..7095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue4.9e-14
Seed eggNOG ortholog2880.D7FWQ3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-10_002960.1
Exons1
Model size2161
Cds size558
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9284.18288.1prot_L-elsbetiae_contig9284.18288.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9284 5552..6109 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816999.2546024-UTR-L-elsbetiae_contig9284:4934..55511622816999.2546024-UTR-L-elsbetiae_contig9284:4934..5551Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9284 4935..5551 +
1691683972.4569337-UTR-L-elsbetiae_contig9284:4934..55511691683972.4569337-UTR-L-elsbetiae_contig9284:4934..5551Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9284 4935..5551 +
1622816999.2770307-UTR-L-elsbetiae_contig9284:6109..70951622816999.2770307-UTR-L-elsbetiae_contig9284:6109..7095Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9284 6110..7095 +
1691683972.4797378-UTR-L-elsbetiae_contig9284:6109..70951691683972.4797378-UTR-L-elsbetiae_contig9284:6109..7095Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9284 6110..7095 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816999.2664492-CDS-L-elsbetiae_contig9284:5551..61091622816999.2664492-CDS-L-elsbetiae_contig9284:5551..6109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9284 5552..6109 +
1691683972.4698703-CDS-L-elsbetiae_contig9284:5551..61091691683972.4698703-CDS-L-elsbetiae_contig9284:5551..6109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9284 5552..6109 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9284.18288.1

>prot_L-elsbetiae_contig9284.18288.1 ID=prot_L-elsbetiae_contig9284.18288.1|Name=mRNA_L-elsbetiae_contig9284.18288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp
MAMSFVPADDVVRYVDETVGEGGLPAVLNGALVDDVPSWYLLKLYLRHRY
HQSGGGGGGGGGIEAGDYDATDNSIDTFNDDAALSGLMGSIQNLLRDNFT
AIGVVEDFGISMRLFDDAGVVPGKGWAAAYKKLGAANKNEASETEGGATL
RHALVSNDVKKYLRLDILLYDHAVAVFHNMVHQHS*
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mRNA from alignment at L-elsbetiae_contig9284:4935..7095+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9284.18288.1 ID=mRNA_L-elsbetiae_contig9284.18288.1|Name=mRNA_L-elsbetiae_contig9284.18288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2161bp|location=Sequence derived from alignment at L-elsbetiae_contig9284:4935..7095+ (Laminarionema elsbetiae ELsaHSoW15)
GTAGCATCTTTCTATAGGCAGGCATGCAGCGTCCGCCGCCGAGGCGGAGG GGAGGGAAGGCGCTGAGGACCCTGCTGCGGTCTCCGCTCTCCGTGCGCAG CCCCATCAGCCTGGCGCTCTTGCTCTGCCTCGCAGCGCTGTGCGCGGTCC TCCTGGCGAGGCCGAAAGTAGGAGAAGGACCACCCCCGGCCGTCCCGGGT TGCTGGGTCTTCCAACACCTCCACAAGAGCGGCGGCATGACGATCAGGAG GATCATGAACCCGCCGAAGGGAGACTTAGAGGCGGACGGCGACGTCGTCG GCTACGGGTCCGACGAGTGGAGGCTGGGCCAAGGGTTCAGGGACGGGACG CTAGCGCCGCAGATCCTGGACGAAAAAAGATACAGGATCGCAACCGGGGG GTACACGGGGGCCTTGCGGCTCTCCCCCGGCCCGGCAAAAAGCTGCAAGT TCTTCACGGTCTTCAGGCACCCGGTCAACAGGCTTGTTTCCGCGTACTAG TGGTGCCGGTCGCCGAAGCACAGCTGGGACCCGCTGTGCGCTTCGAGCGT GGTGGACGCGGCAACGGTGGGCCTCGTCGGCTTCGCCGAGCACTGGGGAA ACTACGCGACCCGCCAGATGGCCATGTCCTTCGTCCCTGCCGATGACGTC GTTCGGTACGTCGACGAAACCGTCGGCGAAGGCGGACTCCCTGCGGTGCT GAACGGCGCCCTTGTCGACGACGTCCCTTCCTGGTACCTGCTCAAGCTGT ATCTGCGACATCGGTACCACCAGAGCGGCGGCGGCGGCGGCGGCGGGGGG GGGATCGAGGCGGGCGACTATGATGCCACTGATAATAGTATCGACACGTT CAACGACGACGCGGCCCTGTCGGGCCTGATGGGCTCAATACAGAACCTCC TCCGCGACAACTTCACGGCGATCGGCGTGGTAGAAGACTTCGGCATCAGC ATGAGGCTGTTCGACGATGCCGGGGTCGTCCCCGGGAAAGGCTGGGCCGC CGCGTACAAGAAGCTCGGAGCGGCCAACAAGAACGAGGCCTCGGAGACAG AGGGAGGGGCGACTTTGCGGCACGCCCTGGTATCAAATGACGTCAAGAAA TACCTCCGGCTCGACATACTGCTCTACGATCACGCCGTTGCGGTTTTCCA CAACATGGTCCATCAGCACTCCTAGTCCCTAGACTAGAGCAGGGACGGCA AAGCGCCTCCTGGCCTCCTTGCGGGTTGTTTGGCAGCGGTCTTGTTGCGA TTGCGGGGATGTAGTGGTCTTGTTAGCGTATTGCGGGTATGGCGGGTATC CCGTGGATGGCAAGGGCTCATCGTGTGTCCTAGAACCGCCGGAGAGAGAG AGGACACCGCTGTTAGATGAAAACCAACAACCGCTGCTGAGGTGCTCGAC ACTGGAGCGCAGTCCGCTGCCGGTAGGTTACCTGCTTTCAGCGGGCGTGT CTTGTTGGGGGTATGGGTTCTGGTGGTGGTTTTTACGAGTGGCAAGGTGC TCCAAGAAGTAGACAAGCATATGGGATGGATCCTGTCGAAACGTAATTGT CTTTGGCCATCGAGGGTTTGGAGTACACCCTCGAGCACAATTTAAGCACG CGGGACCAACGTGGTTATAAACTACACGGACCGTTCGCATGCCATGATGT TAACTGTATGCCGGTAAACTTGGTGCACAATCGCATGGGAGCGTTCGGCT TATATCGCTGCGATAACCGTACGCTCGCGTGTGATTGTTGTGCACCTTTT TCTCGGTACGCAGCCCAACATGACGTTTGAACGGTCCGTGCAATTAATGG CGCACATAGACCCCATGTATATAGCTGTGCTAACAAAGAGGTGTTTCTTC GCGTTTCCCGTGCGGAGTTGATGTACGTACATATGTGTGTAGAGCATGGG CCGCACAGTTTTTTTGCTGGCGAGCCTACGGAAGATTCTAGACTAGACTA CAGTCTATCTTTGTGTTGTACCACATGTGCATGGGCCGCACAGAGTTTCG GGATCTCCTGTTGAACCAAATCGGGGAATGCATTTCGCGTTTTTAAAAAA AGCGTCATTAGATATATCTATCTATCTATGCTAGAAACCCTGGGTGGGCA TTGCGTCTCCTTGGGTGCACGCACCTCCTCTAGATATGATACATATCTAG CATATCTGGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9284:4935..7095+

>mRNA_L-elsbetiae_contig9284.18288.1 ID=mRNA_L-elsbetiae_contig9284.18288.1|Name=mRNA_L-elsbetiae_contig9284.18288.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1116bp|location=Sequence derived from alignment at L-elsbetiae_contig9284:4935..7095+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCATGTCCTTCGTCCCTGCCGATGACGTCGTTCGGTACGTCGACGA
AACCGTCGGCGAAGGCGGACTCCCTGCGGTGCTGAACGGCGCCCTTGTCG
ACGACGTCCCTTCCTGGTACCTGCTCAAGCTGTATCTGCGACATCGGTAC
CACCAGAGCGGCGGCGGCGGCGGCGGCGGGGGGGGGATCGAGGCGGGCGA
CTATGATGCCACTGATAATAGTATCGACACGTTCAACGACGACGCGGCCC
TGTCGGGCCTGATGGGCTCAATACAGAACCTCCTCCGCGACAACTTCACG
GCGATCGGCGTGGTAGAAGACTTCGGCATCAGCATGAGGCTGTTCGACGA
TGCCGGGGTCGTCCCCGGGAAAGGCTGGGCCGCCGCGTACAAGAAGCTCG
GAGCGGCCAACAAGAACGAGGCCTCGGAGACAGAGGGAGGGGCGACTTTG
CGGCACGCCCTGGTATCAAATGACGTCAAGAAATACCTCCGGCTCGACAT
ACTGCTCTACGATCACGCCGTTGCGGTTTTCCACAACATGGTCCATCAGC
ACTCCTAGATGGCCATGTCCTTCGTCCCTGCCGATGACGTCGTTCGGTAC
GTCGACGAAACCGTCGGCGAAGGCGGACTCCCTGCGGTGCTGAACGGCGC
CCTTGTCGACGACGTCCCTTCCTGGTACCTGCTCAAGCTGTATCTGCGAC
ATCGGTACCACCAGAGCGGCGGCGGCGGCGGCGGCGGGGGGGGGATCGAG
GCGGGCGACTATGATGCCACTGATAATAGTATCGACACGTTCAACGACGA
CGCGGCCCTGTCGGGCCTGATGGGCTCAATACAGAACCTCCTCCGCGACA
ACTTCACGGCGATCGGCGTGGTAGAAGACTTCGGCATCAGCATGAGGCTG
TTCGACGATGCCGGGGTCGTCCCCGGGAAAGGCTGGGCCGCCGCGTACAA
GAAGCTCGGAGCGGCCAACAAGAACGAGGCCTCGGAGACAGAGGGAGGGG
CGACTTTGCGGCACGCCCTGGTATCAAATGACGTCAAGAAATACCTCCGG
CTCGACATACTGCTCTACGATCACGCCGTTGCGGTTTTCCACAACATGGT
CCATCAGCACTCCTAG
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