mRNA_L-elsbetiae_contig9281.18285.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9281.18285.1
Unique NamemRNA_L-elsbetiae_contig9281.18285.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: D7FMM1_ECTSI (Topo-VIb_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM1_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 7.000e-111
Identity = 176/244 (72.13%), Postives = 201/244 (82.38%), Query Frame = 1 
Query:    1 QTVKELVDNAIDACRCRTSDQEAPTVRVVLRRRSKNRADIEDQ-EGLEGQK*PLELQVADNGDGLNDVTQALVLFSSSKSGHGSLAAAGFKSNKNEDRNAGKYGLGLTLSLLYSQKHFGGFLKATTARQDSREWTFTKSDIDLETGLPRTLYSKTGLKPDSWSQGCGTDMRLLVPGGEDALGFAESRLKALFARMHLLPDRAAGVSFVCEGCLDDTSIVVPRGGREASPHLLVDNEDLVRAFAK 729
            QTVKELVDNAID+CRCRTS+Q+APTVRVVLRR +   A  E   E L+ ++ PLELQVADNG GL DVT+AL LFSS+KSGH    A    S+    +NAGKYGLGLTLSLLYSQKHFGGFLKATTA  +S +W+FTK DIDLETG PRT+Y K+GLKPDSW++GCGTDMRLLVPG E+AL FA  RLKA F RMHLLPDR AGVSF CEGCLD+ S+ VPRGGR+ASPHLL+DN+DLV+AFAK
Sbjct:    7 QTVKELVDNAIDSCRCRTSEQDAPTVRVVLRRAAAGAAVAEGVGEDLDLEEEPLELQVADNGAGLTDVTKALGLFSSTKSGHTPPVAPDVSSSGAAGKNAGKYGLGLTLSLLYSQKHFGGFLKATTATMESTQWSFTKCDIDLETGTPRTVYRKSGLKPDSWARGCGTDMRLLVPGDEEALDFAAPRLKAFFTRMHLLPDRPAGVSFACEGCLDNMSVCVPRGGRDASPHLLLDNQDLVQAFAK 250
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: A0A6H5JUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR8_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 5.510e-22
Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 1 
Query:    1 QTVKELVDNAIDACRCRTSDQEAPTVRVVLRRRSKNRADIEDQ-EGLEGQK*PLELQVADNGDGLNDVTQALVLFSSSKSGHGSLAAAG 264
            QTVKELVDNAID+CRCR S+Q+APTVRVVLRR +      E   E L+  + PLELQVADNG GL DVT+A+ LFSS+KSGH    A G
Sbjct:   27 QTVKELVDNAIDSCRCRASEQDAPTVRVVLRRSAAGATVAEGVVEDLDLDEEPLELQVADNGAGLTDVTKAVGLFSSTKSGHTPPVAPG 115
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: A0A1Z5JMG3_FISSO (HATPase_c domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMG3_FISSO)

HSP 1 Score: 70.1 bits (170), Expect = 3.690e-10
Identity = 63/200 (31.50%), Postives = 94/200 (47.00%), Query Frame = 1 
Query:    1 QTVKELVDNAIDACRCRTSDQEAPT-VRVVLRRRSKNRADIEDQEGLEGQK*PLELQVADNGDGLNDVTQALVLFSSSKSGHGSLAAAGFKSNKNEDRNAGKYGLGLTLSLLYSQKHFGG---FLKATTARQDSREWTFTKSDIDLETGLPRTLYSKTGLKPDSWSQGCGTDMRLLVPGGEDALGFAESRLKALFARMHL 588
            Q +KELVDNA+DAC     +  +P  VRV ++         ++ E L      L + V DNG G++D+   +  F +SK                E   AG+YG+GLTL LL++Q+   G    +++ TA+Q   EWT  +  +D +    +     +G +P  + Q  GT + LLV GG  A   A  RL     R  L
Sbjct:   50 QIIKELVDNAVDACLSSKKEDSSPKRVRVDIQ-------PTKEDEHL------LRVTVTDNGCGMHDIQACVDPFRTSK-------------QDTESNTAGRYGIGLTLCLLHAQRLVRGSCAVIRSATAQQT--EWTTLQCVVDADQDKIQCTTRISGHQPKDFVQESGTCVSLLVRGGACAT-MAWPRLAEYLQRFQL 220
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: A0A1Z5KBQ7_FISSO (HATPase_c domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBQ7_FISSO)

HSP 1 Score: 67.0 bits (162), Expect = 4.090e-9
Identity = 64/199 (32.16%), Postives = 94/199 (47.24%), Query Frame = 1 
Query:    1 QTVKELVDNAIDACRCRTSDQEAPTVRVVLRRRSKNRADIEDQEGLEGQK*PLELQVADNGDGLNDVTQALVLFSSSKSGHGSLAAAGFKSNKNEDRNAGKYGLGLTLSLLYSQKHFGG---FLKATTARQDSREWTFTKSDIDLETGLPRTLYSKTGLKPDSWSQGCGTDMRLLVPGGEDALGFAESRLKALFARMHL 588
            Q +KELVDNA+DAC   +SD E  + + V       R DI+  +  +     L + V DNG G+ D+   +  F +SK                E   AG+YG+GLTL LL++Q+   G    +++ TA+Q   EWT  +  +D +    +     +G +P  + Q  GT + LLV GG  A   A  RL     R  L
Sbjct:   51 QIIKELVDNAVDACL--SSDHEDTSPKRV-------RVDIQPTKEDDHL---LRVTVTDNGCGMLDIQACVDPFRTSK-------------QDTESNTAGRYGIGLTLCLLHAQRLVRGSCAVIRSATAQQT--EWTTLQCVVDADQDKIQCTTRISGHQPKDFVQESGTCVSLLVRGGACAT-MAWPRLAEYLQRFQL 221
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: A0A7S2BFX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BFX7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.360e-5
Identity = 50/144 (34.72%), Postives = 67/144 (46.53%), Query Frame = 1 
Query:  295 AGKYGLGLTLSLLYSQKHFGGFL----KATTARQD------------SREWTFTKSDIDLETGL-----PRTLYSKTGLKPDSWSQGCG-TDMRLLVPGGEDALGFAESRLKALFARMHLLPDRAAGVSFVCEGCLDDTSIVVP 660
            +GKYG+GL+ ++L+S  HFG  +    +A   R+               E+T    D+D E G         + S TG     WSQ  G T +RLLVPG   +LG A  RL   F R+ L       VS+  EGCL  T I +P
Sbjct:    2 SGKYGVGLSATILHSGLHFGSSMIGGNQAAVPRKGVCVISTFAHRGMGTEYTL---DVDHEMGAIVCTHKEDIESCTG----RWSQSHGWTSVRLLVPGS--SLGGAVHRLHMYFQRLRLTRKLQIDVSYAEEGCLTGTRIHIP 136
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: K0THH6_THAOC (HATPase_c domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THH6_THAOC)

HSP 1 Score: 55.8 bits (133), Expect = 2.420e-5
Identity = 66/210 (31.43%), Postives = 97/210 (46.19%), Query Frame = 1 
Query:    1 QTVKELVDNAIDACR------CRTSDQEAPT---VRVVLRRRSKNRADIEDQEGLEGQK*PLE---LQVADNGDGLNDVTQALVLFSSSKSGHGSLAA-AGFKSNKNEDR-NAGKYGLGLTLSLLYSQKHFGGFLKATTARQDSREWTFTKSDIDLETGLPRTLYSKTGLKPDSWSQGCGTDMRLLVPGGEDALGFAESRLKALFARMHL 588
            Q  KELVDNA+DAC         +S+ E+     VRV +   S  R        L G+   +    + V+DNG G+ DV + +  FSS K          G + + +E+   +G++G+GLTLSLL++Q+   G    +T  +  ++          E  +P+       LK DS     GT + L VP G+DA   A  RL   FAR  L
Sbjct:   39 QITKELVDNAVDACTPPSSFSAASSENESAAFKRVRVDISEASVARCQPISNGDLPGESPTISCFRVVVSDNGRGMEDVDKCVNAFSSRKIRREETNQNQGVEGSSDEEHYTSGRFGIGLTLSLLHAQRLLPGTGVCSTRPRRMQK----------EEKIPK-------LKGDS-----GTTISLYVPSGDDA-SRAWLRLAEYFARFQL 225
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: A0A7S2BFG1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BFG1_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.760e-5
Identity = 50/144 (34.72%), Postives = 67/144 (46.53%), Query Frame = 1 
Query:  295 AGKYGLGLTLSLLYSQKHFGGFL----KATTARQD------------SREWTFTKSDIDLETGL-----PRTLYSKTGLKPDSWSQGCG-TDMRLLVPGGEDALGFAESRLKALFARMHLLPDRAAGVSFVCEGCLDDTSIVVP 660
            +GKYG+GL+ ++L+S  HFG  +    +A   R+               E+T    D+D E G         + S TG     WSQ  G T +RLLVPG   +LG A  RL   F R+ L       VS+  EGCL  T I +P
Sbjct:    2 SGKYGVGLSATILHSGLHFGSSMIGGNQAAVPRKGVCVISTFAHRGMGTEYTL---DVDHEMGAIVCTHKEDIESCTG----RWSQSHGWTSVRLLVPGS--SLGGAVHRLHMYFQRLRLTRKLQIDVSYAEEGCLTGTRIHIP 136
[Close]
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: A0A448YXR2_9STRA (HATPase_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXR2_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 7.940e-5
Identity = 54/173 (31.21%), Postives = 81/173 (46.82%), Query Frame = 1 
Query:    1 QTVKELVDNAIDACR----------CRTSDQEAPTVRVVLRRRSKNRADI---EDQEGLEGQK*PLELQVADNGDGLNDVTQALVLFSSSKSGH--GSLAAAGFKSNKNEDRNA----------------GKYGLGLTLSLLYSQK---HFGGFLKATTARQDSREWTFTKSD 417
            Q VKELVDNA+DACR          C   D    T  +  ++R   R DI   ++Q    G    L++ V DNG G+ ++ + +  F +SK G+   S + AG K  +N + NA                G+YG+GLTL LL++Q+   +    + + T R   R   F + D
Sbjct:   78 QIVKELVDNAVDACRSPRCSDEAEYCNXCDDSPNTSEIKPKKRI--RVDIRPPKEQRNRHGGL--LQITVTDNGCGMENIQRCVDAFQTSKDGNQEASRSKAG-KEKRNRNTNAKNNAGNDPGSLSSHTSGRYGIGLTLCLLHAQRCVPNSRSCISSATPRSKHRTRAFFEVD 245
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FMM1_ECTSI7.000e-11172.13Topo-VIb_trans domain-containing protein n=2 Tax=E... [more]
A0A6H5JUR8_9PHAE5.510e-2264.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Z5JMG3_FISSO3.690e-1031.50HATPase_c domain-containing protein n=1 Tax=Fistul... [more]
A0A1Z5KBQ7_FISSO4.090e-932.16HATPase_c domain-containing protein n=1 Tax=Fistul... [more]
A0A7S2BFX7_9STRA2.360e-534.72Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
K0THH6_THAOC2.420e-531.43HATPase_c domain-containing protein n=1 Tax=Thalas... [more]
A0A7S2BFG1_9STRA2.760e-534.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A448YXR2_9STRA7.940e-531.21HATPase_c domain-containing protein n=1 Tax=Pseudo... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9281contigL-elsbetiae_contig9281:660..4449 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.9
Seed ortholog evalue7.7e-27
Seed eggNOG ortholog2880.D7FMM1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histidine kinase-like ATPases
EggNOG OGs2E55C@1,2SBZP@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size729
Cds size225
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816999.0286076-CDS-L-elsbetiae_contig9281:659..7611622816999.0286076-CDS-L-elsbetiae_contig9281:659..761Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9281 660..761 -
1691683972.2757192-CDS-L-elsbetiae_contig9281:659..7611691683972.2757192-CDS-L-elsbetiae_contig9281:659..761Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9281 660..761 -
1622816999.0411792-CDS-L-elsbetiae_contig9281:1455..15781622816999.0411792-CDS-L-elsbetiae_contig9281:1455..1578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9281 1456..1578 -
1691683972.2867215-CDS-L-elsbetiae_contig9281:1455..15781691683972.2867215-CDS-L-elsbetiae_contig9281:1455..1578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9281 1456..1578 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816999.0523057-UTR-L-elsbetiae_contig9281:1578..15911622816999.0523057-UTR-L-elsbetiae_contig9281:1578..1591Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 1579..1591 -
1691683972.2959604-UTR-L-elsbetiae_contig9281:1578..15911691683972.2959604-UTR-L-elsbetiae_contig9281:1578..1591Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 1579..1591 -
1622816999.063749-UTR-L-elsbetiae_contig9281:2033..21581622816999.063749-UTR-L-elsbetiae_contig9281:2033..2158Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 2034..2158 -
1691683972.3053398-UTR-L-elsbetiae_contig9281:2033..21581691683972.3053398-UTR-L-elsbetiae_contig9281:2033..2158Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 2034..2158 -
1622816999.0765457-UTR-L-elsbetiae_contig9281:3410..35101622816999.0765457-UTR-L-elsbetiae_contig9281:3410..3510Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 3411..3510 -
1691683972.315019-UTR-L-elsbetiae_contig9281:3410..35101691683972.315019-UTR-L-elsbetiae_contig9281:3410..3510Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 3411..3510 -
1622816999.0877712-UTR-L-elsbetiae_contig9281:3973..40881622816999.0877712-UTR-L-elsbetiae_contig9281:3973..4088Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 3974..4088 -
1691683972.3261256-UTR-L-elsbetiae_contig9281:3973..40881691683972.3261256-UTR-L-elsbetiae_contig9281:3973..4088Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 3974..4088 -
1622816999.0982947-UTR-L-elsbetiae_contig9281:4298..44491622816999.0982947-UTR-L-elsbetiae_contig9281:4298..4449Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 4299..4449 -
1691683972.339387-UTR-L-elsbetiae_contig9281:4298..44491691683972.339387-UTR-L-elsbetiae_contig9281:4298..4449Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9281 4299..4449 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9281.18285.1prot_L-elsbetiae_contig9281.18285.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9281 660..1578 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9281.18285.1

>prot_L-elsbetiae_contig9281.18285.1 ID=prot_L-elsbetiae_contig9281.18285.1|Name=mRNA_L-elsbetiae_contig9281.18285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=75bp
MRLLVPGGEDALGFAESRLKALFARMHLLPDRAAGVSFVCEGCLDDTSIV
VPRGGREASPHLLVDNEDLVRAFAK
back to top

mRNA from alignment at L-elsbetiae_contig9281:660..4449-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9281.18285.1 ID=mRNA_L-elsbetiae_contig9281.18285.1|Name=mRNA_L-elsbetiae_contig9281.18285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3790bp|location=Sequence derived from alignment at L-elsbetiae_contig9281:660..4449- (Laminarionema elsbetiae ELsaHSoW15)
CAAACAGTGAAGGAGCTGGTGGACAACGCCATAGACGCGTGCAGATGTCG
GACTTCTGACCAGGAAGCCCCTACGGTGCGGGTCGTGCTCCGACGCCGTA
GCAAGAACAGGGCCGATATCGAGGATCAAGAGGGGCTAGAAGGACAAAAG
TGTGGTGAGTCACGTCCGTTCGTCTAGTCGCCGTTACGTGAGTCGTCCCG
GCCAACACAACTGCAGCTGTGACACCAGCAGTTCTGCTGTTCAAGTTCGG
CAACTGTAGGACTGACATTATTCTGCTATTTGCGCTCTGCATACACTACC
GCAAACCCGTTGCTGGTGAACCGTGAACGTTTGTGAATGACGATGATGGC
GATGCATCCAGAGCCGCTCGAGCTGCAGGTGGCGGACAATGGCGACGGGC
TGAACGATGTTACCCAGGCCCTCGTGCTGTTCTCGTCCTCCAAGTCAGGG
CATGGTTCGCTCGCCGCCGCAGGTTTGTTCTAGACCTTCACTATACGGGG
TGATGCCTCGGTTTATCATATGGATAAACAAAACGCCAATACGTGGATGC
CCGGGTGCAGAATCCACGGTTGATGATGAGGGTGGCGGTGGCGGTAGTGG
TGGCGATAGTGGTACGTACATCGTTGTGTTGTTTTTGAAATAATTCATGT
CCTATGTACATCATCATCATGGCCTGCGACAACCAAGCCTCCTTCGGTCC
ACCGAGACACGAAAAAGAAAAACCTGACAATTGATGTATTTCGTTCTGCT
CATCATCTTGTTGTGTTCCCCGTTCCCCGTTTTTCAAGTGTAGCGTGCCG
CATGTCCATTCCTCGACCCCTCGTTTTGTCGTTTCGCTCACCCACACCCA
CGTGGCCCTTTTGCCCTCGCGTCACGTCACCCCCGCCCTCACGAACGGTG
ACCTCAAGGTACTTCGGCGGCCGGCAGGAAGAGCAAGAGCAAGAGCAACA
AAAACGAGGACCGAAACGCCGGCAAGTACGGCCTCGGTCTGACGCTGTCC
CTCCTCTACTCGCAGAAGCACTTCGGAGGCTTCCTCAAGGTTAGTGGGGG
TATCATGTATGTCGGTGTAACGTTCGGCGCTATTTTGGCTTCATTTGATT
CAATAGGCAAGCACCTCAGAGGATGGGTTGAAGGTTCCGGTAGGTGCAGA
GGGTAAGGTCAAGGTTTAGAAACGCACAGATCATGCATGGTCATGCATGC
GGTAGTCTTTAGGTCACAGGCCCTCGAGAGCATCCCCGCATACAAAGCTT
CGTTTCACTCAGCCCACTTCACTCAGCTTGAGGGACTGAGGGAGCACGCC
TACGGCTGAGGGAGCACGCCTACCGTAGGTGACACAAGATACCACACCCC
CTGGGAAAATTTTCGAAGGTCGATTCCTCCCCAGCAAGAAGAGTGCCAGC
GCCAAGAAGGGTAGCGTTGGAAAGATCTAGCCGAGGGCTGCCCGAAAATG
TTTTGTTTGGCGCTGGCACCTTCTTCGTTACGGAGTAATGGAGCTCTAAA
TTCCGGTCCAGGGGGGGTGTGGTATCTTGTGTCACCTTCGGTATCTTGCG
CCACCTACGGTATGGCCGTTTCGCCGATAGGACTAGGCTCCCATGGCAGA
AGAGCATGGCATGGCATGGCATAAGCATGGCATGAGATCCTTCACTTTGG
CATTCATTCTCTTGTGAACACCGAGCGAGAAACAACGCAAGGTGGACGGA
CCCATCTCGATCCATCTCGATCGATCCATGTCGATCGATCCATCTCGACT
CCCTCTGCGAGCCACACAGTGACAAGGAGCAGAGGACTTGGGGGCGATCT
CGTGACACCGAGACACTCGAGTCACGAGTCACTGAATCACTGTAAAACAG
AGGCATCAGTCATGTGGCATGAAACATGAGAGTGGTGTTTGATGCGACGC
TATGCGGTGTGACGGGATGTGATGTTAATTGGCGGGGAAATCTCGGTATG
CGCTCAGAAAGCTCCCAGAGACATCTTTGATATGTTCCGATCAGCGAGCC
ACACGCGATGAACGACGAAGAGTGAGTTCACAGTGTAGCCTTGGTTCGTT
GAGCAGATGTCGAAGACCATCAGGTTTCTCATCTCAACGACGAGTTTGCC
TAATTTGTAGTGGAAGCCACGCCCGCGTCGTGCACGTGATGATGTTTCCT
CCCAAAGCGGAAGAGTTGTGTCTTGCCGTTGTGTAGACATGTCTGGAGTA
CATAGGTTTCGGGTTTCAGTTCTATCCAGCCAACAGCCAACACTATTGAT
GGGTGCCGATCTGATGCTGTGGCATGATGCTCTGCAAGCAGGCAACCACT
GCTAGGCAGGACTCGCGAGAGTGGACCTTCACCAAAAGCGACATCGACCT
TGAGACGGGTTTACCTAGAACATTGTACTCCAAGACCGGCCTGAAGCCGG
ATTCGTGGTCACAAGGGTCAGTACAGTAGTATGCGGAGATAGATGGCACT
GTTGTAACGCCAACGTTCAAGTTCATGTCTGCTGTTCAGGTGCTCTGTAC
TGTTTTGCTGGTAAACAACTCATGAGTACTCTAGTTAGCCCCATGTCCCT
CGATCGAACTCTTGATTGATTGGTTGGTTGGTTGGTTTATCGACAGCTTT
AGCTGTTGGCTTCTGTCTGGGTTTCTGAAGGCAAACAGTAAACATTAACA
TTTCGTGGTTTCAGATTTTCAGATCCAAGAACTTTCAGATTGTTAAAAAT
CTCCAACCTGCGTGTACATGGCATGTGGTCGAATGCTATTGCCTACCCAT
GGGACCAACTGTGTGCAAAACCTTCCGGATGGCAAACATCGATAATTGCC
AGCTTACAATAGCAAAAATGGCACCGACACGTGCGTCCAATGACGCGGAA
CGTCCAAGGTGCGGGACAGACATGCGTCTGCTGGTGCCCGGGGGAGAAGA
CGCCTTGGGCTTCGCAGAGTCCAGGCTGAAGGCCCTGTTCGCGCGCATGC
ACCTCTTGCCGGATCGGGCGGCGGGGGTGTCGTTTGTGTGTGAGGTGAGC
CGGGGGGAAAGGCGCTGTGGCTGCGGCTGCTGTTGCTGGTAGTTGTTGTT
ATCGCGGTTGCTGTTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGC
TGCTGCTGCTGCTGTTTCTTCCTCTGCTGCGTACTCGCTGTGGTCGTTGT
TGCTGTTGTCGCTCTTGCTGTTGTTTGCTGGTTTGTCGATACTGGGGCTA
GTGCCTTCATGTTGATTCCGCTCCGACTGTTTCCCAGTCCACCAGTGGCA
AGTGGCAAGTGGCAAGTGACGCCGGAGGGGAATGGCACGACCTCACCTAG
CTGTCGGTAATCACGCATCGCGCAGCAGGCTACATGTACCAACTCACCAG
AGTTTGTTCAGTGAAACATAAGAAGCACGGAGTATCTTTTGTTTGCACTG
CTCGAAGACGTGAGGCGAGAAAGCGAGACACGCTTGTCGGGTTTGGACTG
CTCAATGTAGGAGATCCCCAGCTAGTTGGACCTATTCGGGATTTTAGAAC
ATCGAAAGAGATGCTCGCTCTTTCTGTTTGTCTACCAACCTCACCAACAC
CAGTAACCATAACAATGTCTTTCTCCACGTTCGATATAACGGCAGCAGTG
CAGTACCACACGTCGTGTGTTGCTCTTACATAGACTATGTACTTCAGTTA
TGTAATAACTAATCGTTTTTGTTTCGTACCTACACTAGGGATGCCTCGAT
GACACAAGCATCGTCGTGCCCCGCGGAGGCCGGGAGGCGTCGCCCCATCT
TCTGGTCGACAACGAGGATCTAGTACGAGCGTTCGCAAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9281:660..4449-

>mRNA_L-elsbetiae_contig9281.18285.1 ID=mRNA_L-elsbetiae_contig9281.18285.1|Name=mRNA_L-elsbetiae_contig9281.18285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=450bp|location=Sequence derived from alignment at L-elsbetiae_contig9281:660..4449- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTCTGCTGGTGCCCGGGGGAGAAGACGCCTTGGGCTTCGCAGAGTC
CAGGCTGAAGGCCCTGTTCGCGCGCATGCACCTCTTGCCGGATCGGGCGG
CGGGGGTGTCGTTTGTGTGTGAGATGCGTCTGCTGGTGCCCGGGGGAGAA
GACGCCTTGGGCTTCGCAGAGTCCAGGCTGAAGGCCCTGTTCGCGCGCAT
GCACCTCTTGCCGGATCGGGCGGCGGGGGTGTCGTTTGTGTGTGAGGGAT
GCCTCGATGACACAAGCATCGTCGTGCCCCGCGGAGGCCGGGAGGCGTCG
CCCCATCTTCTGGTCGACAACGAGGATCTAGTACGAGCGTTCGCAAAGGG
ATGCCTCGATGACACAAGCATCGTCGTGCCCCGCGGAGGCCGGGAGGCGT
CGCCCCATCTTCTGGTCGACAACGAGGATCTAGTACGAGCGTTCGCAAAG
back to top