mRNA_L-elsbetiae_contig9200.18228.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: D7G427_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G427_ECTSI) HSP 1 Score: 190 bits (483), Expect = 4.980e-52 Identity = 97/152 (63.82%), Postives = 106/152 (69.74%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDEGCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAPAHAGYGL 640 QEHGCATMAAM+LRSP NGAQIV +LRP +LDEGCE LR+AGKLRGCVDEAYGALRDL CEVGLV+MGE GKVQIGV AFGEEKPNFNPSLQETKDL +RIEG+ATAPAH+G+ L Sbjct: 419 QEHGCATMAAMSLRSPPNGAQIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLRPTMLDEGCEAVLREAGKLRGCVDEAYGALRDLQCEVGLVTMGESGKVQIGVTAFGEEKPNFNPSLQETKDLGERIEGSATAPAHSGHRL 570
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A835Z2B7_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B7_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.110e-40 Identity = 82/153 (53.59%), Postives = 99/153 (64.71%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIV-HEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDEGCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAPAHAGYGL 640 QEHG A +A M LR+PSN + + H V AMR H PLQRQ CL IRN+AAR P LRP LLDEG E L+ AGK +G VDEAY ALRDL C+ LV+ G ++G++AFGE KP FNP+ E L IE NATAPAH+G+ + Sbjct: 334 QEHGIAALAQMCLRAPSNSERAIRHHSAAVLVAAAMRRHANCVPLQRQCCLFIRNVAARCPELRPVLLDEGFEDLLKTAGKHQGAVDEAYAALRDLGCQAQLVTFTADGATRVGIEAFGETKPQFNPTHSERVGLDAVIEENATAPAHSGFKM 486
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A7S2W7E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7E5_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.160e-32 Identity = 70/149 (46.98%), Postives = 91/149 (61.07%), Query Frame = 2 Query: 188 EHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDEGCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAPAHAGY 634 EH AT+AAMALR P N +IV GG + ++MR P + PLQRQGCL +RN+ AR P LR LL++ E LR AGK+ G +D AY ALRDL EV +VS+ E G VQ+GV+ FG+ K F + D + A +PA G+ Sbjct: 381 EHVLATLAAMALRKPDNCDRIVAAGGAAIITQSMRRFPALTPLQRQGCLAVRNLVARNPHLREPLLEDDTENLLRAAGKIPGSIDAAYAALRDLKLEVEMVSLDENGNVQVGVQMFGQVKSAFKAVWDDNPDTERAMADAARSPAELGF 529
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A7S3MBM2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBM2_9STRA) HSP 1 Score: 127 bits (318), Expect = 7.320e-29 Identity = 72/146 (49.32%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 188 EHGCATMAAMALRSPSNGAQIVHEGGITAVL-EAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDEGCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEE-KPNFNPSLQETKDLADRIEGNATAP 619 EH A +A ++LRSPSN +IV G +L MR + LQRQGCL +RNIAARGP LRP LLD G E LR AG++ VDEAYGALRDL CEV V +G G+V+ + FG K FNP E + R++ A AP Sbjct: 361 EHAVACLAQISLRSPSNAQRIVSAGAALDILARTMRRYADRSGLQRQGCLTVRNIAARGPELRPVLLDAGFEDLLRAAGRIMDVVDEAYGALRDLGCEVHYVKVGADGRVEPVYEQFGAAAKLQFNPIYDEDDYITTRVQEEARAP 506
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A7S2V0I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0I0_9STRA) HSP 1 Score: 110 bits (276), Expect = 6.520e-24 Identity = 65/147 (44.22%), Postives = 84/147 (57.14%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAAR-GPALRPALLDEGCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAPA 622 QE G + AMALR P +++ G A+ A+R HP LQRQ CLC+RN+A R G +R A+L G ET LR AGK +G VDEAY ALRDL C+V LV E GKV A + + FNP + + L ++ + APA Sbjct: 224 QECGAGCLGAMALRQPKCTVRMIQHGAHQAICNALRKHPEHVALQRQCCLCLRNMAVRTGEDVREAILSCGAETLLRAAGKHQGSVDEAYAALRDLGCDVALVKYNEDGKV-----AEDKAQSKFNPVHETSNRLEQKLLSASQAPA 365
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A662WFF7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WFF7_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.690e-21 Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDE--GCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEE--KPNFNPSLQETKDLADRIEGNATAP 619 Q+H CAT+AA+ALRSP N +V G + AM+AH + RQ L +RN+ AR LR L E E LR+A + RGC DEAY ALRDL CE+ L S G + KP FNP E+ L D +E A AP Sbjct: 360 QQHACATLAAIALRSPENSQALVKLGAAQQISRAMQAHRRDVAVLRQASLAVRNMVARSVELRSHFLQEEPDIEPLLREAQQYRGCGDEAYAALRDLGCEIKLSSFGAAAASAAASGSIKASMIKPRFNPVQVESNQLLDSVEEAAEAP 508
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A662Y6A7_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6A7_9STRA) HSP 1 Score: 104 bits (259), Expect = 8.320e-21 Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDE--GCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEE--KPNFNPSLQETKDLADRIEGNATAP 619 Q+H CAT+AA+ALRSP N +V G + AM+AH + RQ L +RN+ AR LR L E E LR+A + RGC DEAY ALRDL CE+ L S G + KP FNP E+ L D +E A AP Sbjct: 652 QQHACATLAAIALRSPENSHALVKLGAAQQISRAMQAHRRDVAVLRQASLAVRNMVARSVELRSHFLQEEPDIEPLLREAQQYRGCGDEAYAALRDLGCEIKLSSFGAAAASAAASGSIKATMIKPRFNPVQVESNQLLDSVEEAAEAP 800
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A3F2RG48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG48_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.350e-20 Identity = 60/149 (40.27%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDE--GCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMG--EGGKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAP 619 Q++ CAT+AA+ALRSP N +V G + + AM+AH + RQ L +RN+ AR LRP L + E LR+A + R C DEAY ALRDL C++ L S G G +P FNP E+ DL + +E A AP Sbjct: 347 QQNACATLAAIALRSPENSHTLVELGAMREISRAMQAHRRDVAVLRQASLAVRNMVARSVELRPRFLQDELDIEPILREAQQYRDCGDEAYAALRDLGCDIQLSSFGVAAASAAASGSIRATTIRPQFNPVQAESNDLLETVEEAAEAP 495
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A3M6VTA3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTA3_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.460e-19 Identity = 62/150 (41.33%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALLDEGCETA--LRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEG---GKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAP 619 Q++ CAT+AA+ALRSP N +V G I + AM+ H + RQ L +RN+ AR LR L + E LR A + RGC DEAY ALRDL C++ L S G G G KP FNP E+K L D +E + AP Sbjct: 366 QQNACATLAAIALRSPENSCALVELGAIRHISRAMQVHHNDVSVLRQASLAVRNMVARSVELRSRFLHDELEIEPLLRKAQQYRGCGDEAYAALRDLGCDIQLSSFGATTVTGAAFSGSMKVLTIKPRFNPVQVESKQLLDIVEEASEAP 515
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Match: A0A024TFI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFI9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.090e-18 Identity = 62/146 (42.47%), Postives = 79/146 (54.11%), Query Frame = 2 Query: 185 QEHGCATMAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAARGPALRPALL-DEGCETALRDAGKLRGCVDEAYGALRDLHCEVGLVSMGEGGKVQIGVKAFGEEKPNFNPSLQETKDLADRIEGNATAP 619 Q GCAT+AA+ LRSP N + V AM + P+ L RQ L IRN+ R ALRP +L D E+ LR A +RGC DEAY ALRDL +V L S+G+ + NFNP ++ + L RI+ NATAP Sbjct: 355 QTLGCATIAAICLRSPPNCERAAGLQAHCVVGIAMHSFPSNVALLRQASLAIRNMVVRNEALRPIILEDPHVESQLRLAMPIRGCGDEAYAALRDLGADVPLASIGQA------------QSANFNPVMESSNQLVGRIQENATAP 488 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9200.18228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9200.18228.1 >prot_L-elsbetiae_contig9200.18228.1 ID=prot_L-elsbetiae_contig9200.18228.1|Name=mRNA_L-elsbetiae_contig9200.18228.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp MAAMALRSPSNGAQIVHEGGITAVLEAMRAHPTVQPLQRQGCLCIRNIAAback to top mRNA from alignment at L-elsbetiae_contig9200:2079..4286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9200.18228.1 ID=mRNA_L-elsbetiae_contig9200.18228.1|Name=mRNA_L-elsbetiae_contig9200.18228.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2208bp|location=Sequence derived from alignment at L-elsbetiae_contig9200:2079..4286+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9200:2079..4286+ >mRNA_L-elsbetiae_contig9200.18228.1 ID=mRNA_L-elsbetiae_contig9200.18228.1|Name=mRNA_L-elsbetiae_contig9200.18228.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig9200:2079..4286+ (Laminarionema elsbetiae ELsaHSoW15)back to top |