mRNA_L-elsbetiae_contig9173.18193.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9173.18193.1
Unique NamemRNA_L-elsbetiae_contig9173.18193.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A6H5KGL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL8_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 5.130e-71
Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 2 
Query:    2 QSQYRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLENTKK--IIIVAKRHIKPGD 373
            Q+QYRMLK +PTG+GLKVRRSHIHGWGLFAL+EFPKD MLVEYMGEVVRQCVADLRE+KYEEMGVGSCYLFRA+ DAIVDATRKGNLARFINHCCDPNAIARIV+LE TKK  IIIVAKR IKPG+
Sbjct:  439 QAQYRMLKTQPTGYGLKVRRSHIHGWGLFALEEFPKDAMLVEYMGEVVRQCVADLREVKYEEMGVGSCYLFRADADAIVDATRKGNLARFINHCCDPNAIARIVNLEGTKKKKIIIVAKRQIKPGE 564
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.490e-67
Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 2 
Query:    5 SQYRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLENTKK--IIIVAKRHIKPGD 373
            +QYRMLK +PTG+GLKVRRSHIHGWGLFAL+EFPKD MLVEYMGEVVRQCVADLRE+KYEEMGVGSCYLFRA+ DAIVDATRKGNLARFINHCCDPNAIARIV+LE TKK  IIIVAKR IKPG+
Sbjct: 3004 AQYRMLKTQPTGYGLKVRRSHIHGWGLFALEEFPKDAMLVEYMGEVVRQCVADLREVKYEEMGVGSCYLFRADADAIVDATRKGNLARFINHCCDPNAIARIVNLEGTKKKKIIIVAKRQIKPGE 3128
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A835YK44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK44_9STRA)

HSP 1 Score: 154 bits (389), Expect = 9.360e-46
Identity = 71/123 (57.72%), Postives = 90/123 (73.17%), Query Frame = 2 
Query:    5 SQYRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLENTKKIIIVAKRHIKPGD 373
            ++YR LK  P    L VRRSHIHGWGLF L  F  + M+VEYMGE +R+CVAD RE KYEEMG+GSCYLF  +   I+DATR G  ARFINHCC PNA A++V+++   K++IVA+R +  G+
Sbjct:    3 ARYRKLKEIPVEQRLVVRRSHIHGWGLFTLMPFAPNDMIVEYMGEKIRRCVADQREKKYEEMGLGSCYLFALDASTIIDATRAGGPARFINHCCGPNADAKVVAVDGVPKLVIVARRALAVGE 125
[Close]
BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: F0YDE7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDE7_AURAN)

HSP 1 Score: 150 bits (378), Expect = 2.520e-44
Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 2 
Query:   56 RRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLE-NTKKIIIVAKRHIKPGD 373
            RRSHIHGWGL+   + PKD  ++EY+G+VVRQ V D RE  Y++ GVGSCYLFR + DAIVDATR+GN+ RFINHCC PNA A+IV+L+ NTKKI+I+A + +K GD
Sbjct:    1 RRSHIHGWGLYCKTDVPKDAFIIEYVGQVVRQAVGDKREKYYDDAGVGSCYLFRLDEDAIVDATRRGNIGRFINHCCRPNAYAKIVALDSNTKKIVIIALQDLKAGD 107
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: W7TQT2_9STRA (Histone-lysine n-methyltransferase setd1a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQT2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.080e-41
Identity = 76/122 (62.30%), Postives = 90/122 (73.77%), Query Frame = 2 
Query:   11 YRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLEN-TKKIIIVAKRHIKPGD 373
            YR LK  P    L V+RS IHGWGLFA +   KDTM+ EY+GEVVR CVADLRE +YEE G GSCYLFR +   IVDAT +GN+ARF+NHCCDPN  ARI+S++   KKII +AKR I  G+
Sbjct: 2482 YRELKAVPFSQRLLVKRSRIHGWGLFAKEPIKKDTMVAEYIGEVVRACVADLREKQYEESGQGSCYLFRLDRYDIVDATMQGNMARFVNHCCDPNCYARIISVDTGEKKIIFLAKRDIAAGE 2603
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A1Y1XK86_9FUNG (Histone methyltransferase (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XK86_9FUNG)

HSP 1 Score: 143 bits (360), Expect = 2.110e-41
Identity = 63/117 (53.85%), Postives = 88/117 (75.21%), Query Frame = 2 
Query:   23 KVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLENTKKIIIVAKRHIKPGD 373
            ++K     LK  +S IH WGLFA++    + M++EY+GE++RQ +AD RE +YE MG+GS YLFR + D I+DAT+KGNLARFINHCCDPN  A+I++++  KKI+I AKR I+ G+
Sbjct:    5 QLKARKKDLKFAKSTIHDWGLFAMERIDANDMVIEYIGEIIRQKIADHREKQYERMGIGSSYLFRIDDDTIIDATKKGNLARFINHCCDPNCNAKIITVDGHKKIVIYAKRDIEEGE 121
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A7S1DDE7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDE7_CYCTE)

HSP 1 Score: 148 bits (373), Expect = 5.480e-41
Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 2 
Query:    2 QSQYRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLENT----KKIIIVAKRHIKPGD 373
            Q +Y+ +K  P    L  RRSHIHGWGLF   + PKD M+VEY+GE VRQC+ D RE  YE+ G+GSCY+FR +   IVDATR G++ARF+NHCC PNA A++++++      KKI++ A R IK G+
Sbjct:  201 QQKYKEMKSVPLQERLAARRSHIHGWGLFCKIDLPKDAMIVEYVGETVRQCIGDKREQAYEKSGIGSCYMFRLDLQRIVDATRIGSMARFMNHCCKPNAYAKVIAVDTDFGPEKKIVVFANRAIKAGE 328
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A1Y2D987_9FUNG (SET domain-containing protein (Fragment) n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2D987_9FUNG)

HSP 1 Score: 144 bits (362), Expect = 7.930e-41
Identity = 62/117 (52.99%), Postives = 89/117 (76.07%), Query Frame = 2 
Query:   23 KVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLENTKKIIIVAKRHIKPGD 373
            ++K     LK  +S IH WGLFA++    + M++EY+GE++RQ +AD+RE +YE MG+GS YLFR + D ++DAT+KGNLARFINHCCDPN  A+I++++  KKI+I AKR I+ G+
Sbjct:   74 QLKARKKELKFAKSAIHEWGLFAMERIDANDMVIEYIGEIIRQKIADIREKQYERMGIGSSYLFRIDDDTVIDATKKGNLARFINHCCDPNCNAKIITVDGHKKIVIYAKRDIEEGE 190
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A6G0WLH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLH6_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.760e-40
Identity = 73/123 (59.35%), Postives = 94/123 (76.42%), Query Frame = 2 
Query:    8 QYRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLE-NTKKIIIVAKRHIKPGD 373
            QYR L+ +P G  L+VR+S IHG+GLF  +   +  M+VEY G+ +RQ VAD+RE +YEEMG+GSCY+FR + D IVDATR GNLARFINH CDP A ARI++++ N KKIII AK  ++PGD
Sbjct: 1926 QYRELRRRPFGERLEVRKSKIHGYGLFVKEAIGEGKMIVEYQGQAIRQKVADMREKRYEEMGIGSCYMFRLDKDVIVDATRTGNLARFINHSCDPKANARIINIDGNEKKIIIFAKVPLQPGD 2048
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BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Match: A0A485L3L2_9STRA (Aste57867_15657 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3L2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.400e-40
Identity = 72/123 (58.54%), Postives = 93/123 (75.61%), Query Frame = 2 
Query:    8 QYRMLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADLREIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVSLE-NTKKIIIVAKRHIKPGD 373
            QYR L+ +P    L+VR+S IHG+GLF  +   +  M+VEY G+ +RQ VAD+RE +YE+MG+GSCY+FR + D IVDATR GNLARFINH CDP A ARI++++ N KKIII AK  +KPGD
Sbjct: 1988 QYRELRRRPFSERLEVRKSKIHGYGLFVKEAIAEGKMIVEYQGQAIRQKVADMREKRYEDMGIGSCYMFRLDKDVIVDATRTGNLARFINHSCDPKANARIITIDGNEKKIIIFAKSSLKPGD 2110
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9173.18193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGL8_9PHAE5.130e-7188.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU3_ECTSI1.490e-6788.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YK44_9STRA9.360e-4657.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YDE7_AURAN2.520e-4463.55Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W7TQT2_9STRA1.080e-4162.30Histone-lysine n-methyltransferase setd1a n=2 Tax=... [more]
A0A1Y1XK86_9FUNG2.110e-4153.85Histone methyltransferase (Fragment) n=1 Tax=Anaer... [more]
A0A7S1DDE7_CYCTE5.480e-4152.34Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Y2D987_9FUNG7.930e-4152.99SET domain-containing protein (Fragment) n=4 Tax=N... [more]
A0A6G0WLH6_9STRA1.760e-4059.35Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485L3L2_9STRA2.400e-4058.54Aste57867_15657 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9173contigL-elsbetiae_contig9173:4389..7133 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.6
Seed ortholog evalue2.5e-56
Seed eggNOG ortholog2880.D8LHU3
Preferred namePHF6
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K09186,ko:K09188,ko:K11422,ko:K14959,ko:K18494,ko:K22371
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04934,ko05202,map00310,map04934,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000123,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000980,GO:0000981,GO:0001012,GO:0001067,GO:0001158,GO:0001227,GO:0001541,GO:0001654,GO:0001894,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003680,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006479,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0007444,GO:0007482,GO:0007548,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007623,GO:0007632,GO:0008023,GO:0008092,GO:0008150,GO:0008152,GO:0008157,GO:0008168,GO:0008170,GO:0008213,GO:0008270,GO:0008276,GO:0008285,GO:0008306,GO:0008354,GO:0008406,GO:0008542,GO:0008585,GO:0008757,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0009994,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016458,GO:0016477,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018026,GO:0018027,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0030728,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031090,GO:0031175,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032409,GO:0032411,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032784,GO:0032786,GO:0032879,GO:0032922,GO:0032968,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034968,GO:0035065,GO:0035097,GO:0035162,GO:0035216,GO:0035295,GO:0035326,GO:0035640,GO:0036211,GO:0040011,GO:0040029,GO:0042054,GO:0042127,GO:0042221,GO:0042330,GO:0042393,GO:0042592,GO:0042800,GO:0042802,GO:0042803,GO:0042826,GO:0043021,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043543,GO:0043565,GO:0043933,GO:0043966,GO:0043967,GO:0043984,GO:0044030,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044648,GO:0044665,GO:0044703,GO:0044728,GO:0044877,GO:0045137,GO:0045322,GO:0045595,GO:0045637,GO:0045652,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046545,GO:0046660,GO:0046872,GO:0046914,GO:0046983,GO:0048096,GO:0048167,GO:0048168,GO:0048172,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048568,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050804,GO:0050877,GO:0050890,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051219,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0051674,GO:0051704,GO:0060216,GO:0060249,GO:0060255,GO:0060429,GO:0061458,GO:0061564,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070577,GO:0071339,GO:0071440,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080182,GO:0090304,GO:0097110,GO:0097159,GO:0097485,GO:0097659,GO:0099177,GO:0120036,GO:0120039,GO:0140030,GO:0140033,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901532,GO:1901564,GO:1901576,GO:1901674,GO:1901983,GO:1902036,GO:1902275,GO:1902493,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1905269,GO:1905642,GO:1990234,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000615,GO:2000736,GO:2000756,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001141,GO:2001252
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1080@2759,KOG1084@2759,KOG4443@2759
EC2.1.1.43,2.3.2.26
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko04121
Exons3
Model size373
Cds size357
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9173.18193.1prot_L-elsbetiae_contig9173.18193.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9173 4389..7117 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816990.8548925-CDS-L-elsbetiae_contig9173:4388..44721622816990.8548925-CDS-L-elsbetiae_contig9173:4388..4472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9173 4389..4472 -
1691683965.9835033-CDS-L-elsbetiae_contig9173:4388..44721691683965.9835033-CDS-L-elsbetiae_contig9173:4388..4472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9173 4389..4472 -
1622816990.8650897-CDS-L-elsbetiae_contig9173:5817..59961622816990.8650897-CDS-L-elsbetiae_contig9173:5817..5996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9173 5818..5996 -
1691683966.002415-CDS-L-elsbetiae_contig9173:5817..59961691683966.002415-CDS-L-elsbetiae_contig9173:5817..5996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9173 5818..5996 -
1622816990.8754587-CDS-L-elsbetiae_contig9173:7023..71171622816990.8754587-CDS-L-elsbetiae_contig9173:7023..7117Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9173 7024..7117 -
1691683966.0130193-CDS-L-elsbetiae_contig9173:7023..71171691683966.0130193-CDS-L-elsbetiae_contig9173:7023..7117Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9173 7024..7117 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816990.8866985-UTR-L-elsbetiae_contig9173:7117..71331622816990.8866985-UTR-L-elsbetiae_contig9173:7117..7133Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9173 7118..7133 -
1691683966.0235198-UTR-L-elsbetiae_contig9173:7117..71331691683966.0235198-UTR-L-elsbetiae_contig9173:7117..7133Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9173 7118..7133 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9173.18193.1

>prot_L-elsbetiae_contig9173.18193.1 ID=prot_L-elsbetiae_contig9173.18193.1|Name=mRNA_L-elsbetiae_contig9173.18193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MLKVKPTGHGLKVRRSHIHGWGLFALDEFPKDTMLVEYMGEVVRQCVADL
REIKYEEMGVGSCYLFRAEGDAIVDATRKGNLARFINHCCDPNAIARIVS
LENTKKIIIVAKRHIKPGD
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mRNA from alignment at L-elsbetiae_contig9173:4389..7133-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9173.18193.1 ID=mRNA_L-elsbetiae_contig9173.18193.1|Name=mRNA_L-elsbetiae_contig9173.18193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2745bp|location=Sequence derived from alignment at L-elsbetiae_contig9173:4389..7133- (Laminarionema elsbetiae ELsaHSoW15)
GCAGTCGCAGTACAGGATGCTCAAGGTGAAGCCGACAGGGCATGGACTCA
AGGTTCGCCGCTCTCACATCCACGGCTGGGGGCTGTTTGCGTTAGACGAG
TTTCCGAAAGGTGTGCGGCTGTTTTGTGCTGTTGTGTTTATGTACATGTG
CGCGGCATAACCGGCAGCCTGTCGTCGTTTGTTGACAGTCCCGTCGTCAT
CGTCGTCGTCGTCCGTCGTCGACGTTGTTGTTGTTGCTGTTGATGTTGTT
GTATGGGACTGGACTCAGGAAGTTGAAGGGCTTTTGATGAAAGCATAAGA
TTGTTTTTTATTTTTAATAAAAAACTTTTCGTACCTCTGACCCCGGTTGG
TTCTAGTTGTACAAACAAATGCACTGCAAAGTGTAGTACCTCTAAGTACA
CCGCAAGGTGTAGTACACGTCTCCCCTTGACTGGGGGGACTGTCGCCAAA
GTAAATGGGAAGGACACACACACTCTGTCAAAAGGCGCCTACGTCGAATG
TATGTTCATATGGTACAGGTATGTATGTATACATATTAAAGTCATTTTTT
ATTGCGTTAAAAACACTGGTCATTTCATCAAAAAGCGTTTGGCCTGTTGA
CAAAATAAAAACGGCTAGAAATGAACCAGACCAATTTCATGAGCTACCGA
GGTCATCTCGCTTTGTGTCTGATATGTTGCTGCTCATGCGCGGGGGTTTA
CTTCCACCAGGGCTAAAATATGGCTCTCTGTCTCTTTCTATCTCTCTCTA
TTTCTCTCTCTCTCTCTCTCCTCTCGCTGCGAACCGTCTGGTATATGTAC
CCCCAATAGCGAGAGTGAAATACGCACGTGTGCCGAAAGAGCAACCATTA
GACGACGAGGTCGGACCAGCTGGTGTATCCATCCGATTTTCCGCCGCGAA
ACCCCCGATATACCCACCCACACTTGGAATCACCCCGACCCCCCAACCCC
CTTGCGCATGCTTCGACCAATAATTGCACCCCCCTTTTCCGAATCCTGGT
TCGGATCAAATCAACCCCATGCCCACTCCCACCCGTATGGCGACCGATCG
ATGGCAACCCGAATGGCGCCGACCCACACACCCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTATTCTCGCCGCAGACACCATGCTCGT
GGAGTACATGGGCGAGGTGGTGCGGCAGTGCGTGGCCGACCTCCGAGAGA
TCAAGTATGAGGAGATGGGTGTGGGCAGCTGCTACCTCTTCCGGGCGGAG
GGCGACGCGATCGTGGACGCCACCCGGAAGGGAAACCTCGCGAGGTTCAT
CAACCATTGCTGTGACGTGAGTCGAGAGTCGAGTCGGGCCCCCTAAATTT
GTACCATATGTACCTGCATCTGTACACACGTGTGATTTTGTTGTTTTCTT
CTTTTTCCTCCCGTTATTGGCTTATTCGTCCTCTGCCCCACTGGCCCCTG
GCCCCCATATCTAATATGTACTCCACTGCGAATAGCTAGACGACCCAACC
GGGGTACGTACATCCTTTTTTTTTTTTTTTTTGTTGTGTTTATATACACA
TAAAAAACTAACAATCCCTTTTCTGCTCAAAANNNNNNNNNNTTTCGCTT
TTTTGTTTTCTTTTCTTTCTTCTTTCCTTCTCCCTTTTTTTTTTTTTTTG
GGAGTATTTATATACACACGCACATTTCACCACGCTTTTTCTGCTCTCGA
ACTGTTCGTTCGTTGCGTATTTGCTTGTCTGGTTTTGTTTGTATGTAGCT
CTCGAGTCCGAAGCAAATATCTGGTGCGGGGTGGGGGCATTGTTGCAAAA
CTGGCCCCCCTCGGCCCGATGAAAAAACTAATTGAAGATACTATGGCAGA
CAGAGTCTTTAAAGCAATAAAAATAAAATATATTGAAGATAATATGGCAG
ACAGAGTCTTATATAAGTACAAAAAGAAAATGTATTGAAGATAATATGGC
AGACAGAGTCTTTAAAGTAATACAAATAAAACATACTTGTATTGAAGATG
ATATGGCACCCATTCTCTAGGTAAATACGCCCTGCGAGAGTAGAATGAGC
CCTTAAAAGGGGTTCACTGCTATGTACCGTATGTGTATGTGTGTGTTTTG
TGTGTGGGGGGGGCGTTTCCGTTCTCAATGGTTTCTTGCTTATCCCTCCT
CGTCGTTGGCGCAACAACCCTGTCTATGTAGCCTGCGTGGGACTGAGATT
GAGTGTTTTTTTGGCTTTTGGCAGTGAAATATGGGAGTATTTTTGTTGTT
GTACTTAGCATGTCGGCGCTTTTGTTTGACAGCCTCGCACTGCTGTGTGT
TTTCTCATTGGCGTCGCCTGCGTGAGACTGAGGTCGAGTTTATTTTTGCC
TTTTGGGAGTGAAAGATGGGAGTATTTTTGTTTTTGTTGTTGTACTCAGC
ATGTCGGGGCTTTTGTTTGACAGCCTCGCGCTGCTGCGTGTTTTCTGATT
GGCGTCGCATGAAAGCACCAGCTGAGCTTCACCCGCCTACCCGCGACGCC
TTCCTAACTTCGATGCTGTCAGGCGTCGCAGGTCTCGTGCGTACACTCCG
ATGAAGGCAGGTTTGGAATCAAAAAGGGGAGGTTGTTATAGTCCCACTTT
ACCCCACACGCCTCATTTGTTTTTTGCTGTTCTGTTTATACCTTCCACCG
TTCTTTCGCAGCCGAATGCCATCGCGCGAATCGTCAGTTTGGAGAACACC
AAAAAGATCATCATAGTGGCCAAGAGACATATCAAGCCGGGAGAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9173:4389..7133-

>mRNA_L-elsbetiae_contig9173.18193.1 ID=mRNA_L-elsbetiae_contig9173.18193.1|Name=mRNA_L-elsbetiae_contig9173.18193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig9173:4389..7133- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCAAGGTGAAGCCGACAGGGCATGGACTCAAGGTTCGCCGCTCTCA
CATCCACGGCTGGGGGCTGTTTGCGTTAGACGAGTTTCCGAAAGATGCTC
AAGGTGAAGCCGACAGGGCATGGACTCAAGGTTCGCCGCTCTCACATCCA
CGGCTGGGGGCTGTTTGCGTTAGACGAGTTTCCGAAAGACACCATGCTCG
TGGAGTACATGGGCGAGGTGGTGCGGCAGTGCGTGGCCGACCTCCGAGAG
ATCAAGTATGAGGAGATGGGTGTGGGCAGCTGCTACCTCTTCCGGGCGGA
GGGCGACGCGATCGTGGACGCCACCCGGAAGGGAAACCTCGCGAGGTTCA
TCAACCATTGCTGTGACACACCATGCTCGTGGAGTACATGGGCGAGGTGG
TGCGGCAGTGCGTGGCCGACCTCCGAGAGATCAAGTATGAGGAGATGGGT
GTGGGCAGCTGCTACCTCTTCCGGGCGGAGGGCGACGCGATCGTGGACGC
CACCCGGAAGGGAAACCTCGCGAGGTTCATCAACCATTGCTGTGACCCGA
ATGCCATCGCGCGAATCGTCAGTTTGGAGAACACCAAAAAGATCATCATA
GTGGCCAAGAGACATATCAAGCCGGGAGATCCGAATGCCATCGCGCGAAT
CGTCAGTTTGGAGAACACCAAAAAGATCATCATAGTGGCCAAGAGACATA
TCAAGCCGGGAGAT
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