mRNA_L-elsbetiae_contig9133.18163.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: D7FMH5_ECTSI (BRO1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH5_ECTSI) HSP 1 Score: 125 bits (315), Expect = 4.280e-32 Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 VRVGFKWG+SFNPNKKSTQST LFE+AC+LYNLGAHESRSASEEDR TEAGLKAA HRFQV+AGIF Sbjct: 61 VRVGFKWGNSFNPNKKSTQSTFLFEKACILYNLGAHESRSASEEDRETEAGLKAAGHRFQVSAGIF 126
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A6H5KAZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ2_9PHAE) HSP 1 Score: 125 bits (315), Expect = 4.330e-32 Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 VRVGFKWG+SFNPNKKSTQST LFE+AC+LYNLGAHESRSASEEDR TEAGLKAA HRFQV+AGIF Sbjct: 61 VRVGFKWGNSFNPNKKSTQSTFLFEKACILYNLGAHESRSASEEDRETEAGLKAAGHRFQVSAGIF 126
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A835Z8P6_9STRA (BRO1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8P6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.520e-15 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 ++V F W D+F P+KK QS+L FERACVLYNL A ES A DR++E G+KAA FQ AAG+F Sbjct: 85 IKVAFNWCDAFVPSKKKGQSSLAFERACVLYNLAAIESHLACNADRASEDGIKAAYRHFQQAAGMF 150
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A425CHZ6_9STRA (BRO1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CHZ6_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 7.640e-14 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +++ F W DSF P KKSTQ+ + FE+A V++N+GA ES+ + DRST GLK A H F AAG F Sbjct: 18 LQLQFTWTDSFCPRKKSTQTGISFEKAAVMFNIGALESQLGVQTDRSTVEGLKLACHHFMRAAGAF 83
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A0P1A6M5_PLAHL (Predicted signal transduction protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6M5_PLAHL) HSP 1 Score: 72.8 bits (177), Expect = 1.980e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +R+ F W DSF P +KSTQ+ + FE+A +++N+GA ES+ + DRST GLKAA H F AAG F Sbjct: 94 LRLQFTWNDSFCPRRKSTQTGVSFEKAAIMFNMGALESQLGLQTDRSTADGLKAACHHFMKAAGAF 159
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A3M6VUI6_9STRA (BRO1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUI6_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.580e-13 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +++ F W DSF P KKSTQ+ + FE+A V++N+GA ES+ + DRST GLK A H F AAG F Sbjct: 95 LQLQFTWTDSFCPRKKSTQTGISFEKAAVMFNIGALESQLGVQTDRSTVEGLKIACHHFMRAAGAF 160
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A225X596_9STRA (Programmed cell death 6-interacting protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225X596_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.060e-13 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +++ F W DSF P KKSTQ+ + FE+A VL+N+GA ES+ + DRST GLK A H F AAG F Sbjct: 91 LQLQFTWNDSFCPRKKSTQTGVAFEKAAVLFNVGALESQLGVQTDRSTADGLKTACHHFMRAAGAF 156
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A484E2V7_BRELC (BRO1 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2V7_BRELC) HSP 1 Score: 70.9 bits (172), Expect = 9.450e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +R+ F W DSF P KKSTQ+ L +E+A V++N+GA ES+ + +R+T GLKAA H F AAG F Sbjct: 92 LRLQFTWNDSFCPRKKSTQTGLSYEKAAVMFNVGALESQLGVQIERNTARGLKAACHHFMKAAGAF 157
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: W2PU36_PHYPN (BRO1 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2PU36_PHYPN) HSP 1 Score: 70.9 bits (172), Expect = 9.450e-13 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +++ F W DSF P KKSTQ+ + FE+A V++N+GA ES+ + DRST GLK A H F AAG F Sbjct: 94 LQLQFTWNDSFCPRKKSTQTGVSFEKAAVMFNVGALESQLGVQTDRSTAEGLKTACHHFMRAAGAF 159
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Match: A0A3M6VVF1_9STRA (BRO1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVF1_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.760e-12 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAGLKAASHRFQVAAGIF 198 +++ F W DSF P KKSTQ+ + FE+A V++N+GA ES+ + DRST GLK A H F AAG F Sbjct: 95 LQLQFTWTDSFCPRKKSTQTGISFEKAAVMFNIGALESQLGVQTDRSTVEGLKIACHHFMRAAGAF 160 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9133.18163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9133.18163.1 >prot_L-elsbetiae_contig9133.18163.1 ID=prot_L-elsbetiae_contig9133.18163.1|Name=mRNA_L-elsbetiae_contig9133.18163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp VRVGFKWGDSFNPNKKSTQSTLLFERACVLYNLGAHESRSASEEDRSTEAback to top mRNA from alignment at L-elsbetiae_contig9133:6331..7629+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9133.18163.1 ID=mRNA_L-elsbetiae_contig9133.18163.1|Name=mRNA_L-elsbetiae_contig9133.18163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1299bp|location=Sequence derived from alignment at L-elsbetiae_contig9133:6331..7629+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9133:6331..7629+ >mRNA_L-elsbetiae_contig9133.18163.1 ID=mRNA_L-elsbetiae_contig9133.18163.1|Name=mRNA_L-elsbetiae_contig9133.18163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=396bp|location=Sequence derived from alignment at L-elsbetiae_contig9133:6331..7629+ (Laminarionema elsbetiae ELsaHSoW15)back to top |