mRNA_L-elsbetiae_contig9113.18144.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE) HSP 1 Score: 370 bits (951), Expect = 2.160e-124 Identity = 185/244 (75.82%), Postives = 206/244 (84.43%), Query Frame = 3 Query: 3 MRSLAPLRGMSGQLSVATSSPWVWVSQGVDPTSAIRAPPRERR-SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLF 731 MRS A R + GQLSVATSSPWVWV+ GVDP SAI PPR+R S R E+V+PAS HELPTAG PEVAF GRSNQGKSTL+GKLLG+PKLVRASKAPGCT+TVNYFALRE G E+ P A+LVDLPGYGFARESK+AVRGWN V YLEGR SSVLRRTFVLVD RHGLQ DDE+MLSFLS VENMVVLTKV+KASP QL++SLEG FQ+A+ HPAT+P+VHC+SAHKG GM EF NTL+ Sbjct: 1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAES--PQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLY 242
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA) HSP 1 Score: 213 bits (543), Expect = 7.010e-63 Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 3 Query: 54 TSSPWVWVSQGVDPTSAI-RAPP---RERRSFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALR-----ESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLT 740 T SPWVW +G+D SA+ R P R R+ +A F P K +LP AG PEVAFCGRSN GKSTL+G L+ + KLVRASK PGCTRTVNYF L + G E Y+VDLPGYGFA+ + V+ W + V ++ R ++LRRTFVL+D RHG+++ DE+M++ L GV +VLTK ++ + + +EGV + A RH A PVVH VSA G G+ + +T++ +T Sbjct: 3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVT 240
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH) HSP 1 Score: 169 bits (429), Expect = 8.510e-46 Identity = 91/197 (46.19%), Postives = 127/197 (64.47%), Query Frame = 3 Query: 132 SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHA-YLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALR--HPATVPVVHCVSAHKGLGMDE 713 S ++ P+ H+LP+AGRPEVAF GRSN GKS+L+ LLG+ L+R SK PGCT T+NY+AL + G A HA YL+D+PGYGFA+ +K+ + W V YL R +LRR FVL+DSR G+Q D EM+ L+ + VVLTK + S ++ + L +F V R + + +P+VH VSA KGLG+++ Sbjct: 70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAK--GSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLED 264
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: UPI001C99D90F (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Caenibius sp. WL TaxID=2872646 RepID=UPI001C99D90F) HSP 1 Score: 159 bits (402), Expect = 1.270e-42 Identity = 85/194 (43.81%), Postives = 113/194 (58.25%), Query Frame = 3 Query: 132 SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDE 713 S R EF+ A H LP PE+AFCGRSN GKS+L+ L G + R S PG T+ +N+F + E P LVD+PGYGFA+ K V W + V ++L GRV L+RT +LVDSRHG++ D EM+ L V +VLTK +K +L K +E Q A +HPA PV+H S+ K +G+DE Sbjct: 17 SGRVEFLKSAPALHFLPDPEHPEIAFCGRSNVGKSSLLNALTGRRAIARTSVTPGRTQELNFFEVGE------PTVFRLVDMPGYGFAKAPPKVVEKWRALVREFLRGRVP--LKRTLLLVDSRHGIKDVDREMMRMLDEAAVGYRIVLTKADKIKASELAKVVEATAQEARKHPAAFPVIHVTSSEKKMGIDE 202
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH) HSP 1 Score: 159 bits (401), Expect = 2.060e-42 Identity = 83/191 (43.46%), Postives = 108/191 (56.54%), Query Frame = 3 Query: 177 LPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLTAGH 749 LP RPE+AF GRSN GKS+LI L+G +L RAS PG T+ +N+F E +LVD+PGYGFA K+ V WN + YL GR L R F+L+D+RHGL+ D+E+L L G V VVLTK +K P L K +E + +HPA P + S+ KGLG +E T+ L H Sbjct: 35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFTDPER-------DLFLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGR--RTLLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTIAQLLESH 216
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A3M1JLX5_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JLX5_9PROT) HSP 1 Score: 158 bits (400), Expect = 2.570e-42 Identity = 87/196 (44.39%), Postives = 111/196 (56.63%), Query Frame = 3 Query: 129 RSFRAE--FVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMD 710 R FR E FV +LP G PE+AF GRSN GKS+L+ L+G +L R S PG TR VNYF L ++ +LVDLPGYG+A+ K+ V GWN + DYL GR S LRR F+L+DSRHG++ D L + V VLTK +K +L K +E RHPA P + SA KG+G+D Sbjct: 16 RLFRRECTFVKGVVRVADLPDGGLPEIAFAGRSNVGKSSLLNALVGRKQLARTSNTPGRTREVNYFLLGDA--------LWLVDLPGYGYAKAPKREVAGWNRLIEDYLRGRAS--LRRVFLLLDSRHGIKASDRPTLDLMDSSAVSYQAVLTKTDKLKTGELEKVMERTASELARHPAAHPEIIATSAQKGIGLD 201
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A6M8VVN7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VVN7_9PROT) HSP 1 Score: 158 bits (400), Expect = 2.720e-42 Identity = 84/197 (42.64%), Postives = 115/197 (58.38%), Query Frame = 3 Query: 147 FVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCL 737 FVT A+ LP PEVAF GRSN GKS+L+ L G L R S PG T+ +N+FA+ + LVDLPGYG+A+ SK AV+ WN+ + DYLE R + LR ++L+DSRHGL+ D+E++ L GV ++LTK +K Q+ K + V +HPA PV H S+HK G+D+ +F L Sbjct: 19 FVTGAATVDALPDTSVPEVAFVGRSNVGKSSLLNALTGQASLARTSHTPGRTQQLNFFAVSDGS-------IRLVDLPGYGYAKASKGAVKSWNNLIRDYLEYRPN--LRHVYILIDSRHGLKEGDKEVMDLLDKMGVAYQIILTKSDKIKKEQMDKVVAATEAVLKKHPAAFPVPHSTSSHKRYGVDDMQRAVFKL 206
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A0H4VWE2_9SPHN (Probable GTP-binding protein EngB n=2 Tax=Aurantiacibacter TaxID=2800681 RepID=A0A0H4VWE2_9SPHN) HSP 1 Score: 157 bits (398), Expect = 5.030e-42 Identity = 89/194 (45.88%), Postives = 110/194 (56.70%), Query Frame = 3 Query: 132 SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDE 713 S R EF+ A LP PEVAFCGRSN GKS+LI L G + R S PG T+ +N+F + E P LVD+PGYGFA+ K V W V +L GRV LRRT VLVDSRHGL+ D +M++ L V +VLTK +K +L K V Q A +HPA P +H SA KG+G+DE Sbjct: 18 SGRVEFLLSAPQLKFLPEPDFPEVAFCGRSNVGKSSLINALTGRRSIARTSVTPGRTQELNFFEVGE------PTEFRLVDMPGYGFAKAPLKVVEKWRKLVRTFLRGRVP--LRRTMVLVDSRHGLKDSDRDMMTILDEAAVGYRLVLTKADKIKASELEKVAALVAQEARKHPAAFPQIHITSAEKGMGLDE 203
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: UPI00082CF604 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Pseudovibrio hongkongensis TaxID=1647556 RepID=UPI00082CF604) HSP 1 Score: 157 bits (398), Expect = 5.340e-42 Identity = 88/198 (44.44%), Postives = 112/198 (56.57%), Query Frame = 3 Query: 144 EFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCL 737 +F+T + +LP G+ EVAFCGRSN GKS+LI L G L R S PG T+ +N+F GE P +VD+PGYG+A K V W S V DYL GR + LRR F LVDSRHG++++D E + L V VVLTK +K P QL + E + PA PVV S+ KG+GMDE T+ L Sbjct: 24 DFITSVAEVKKLPPLGKLEVAFCGRSNVGKSSLINALTGRKGLARTSNTPGRTQMLNFF------GEVDAP-IDIVDMPGYGYAEAPKNMVDAWTSLVFDYLRGRAT--LRRVFALVDSRHGIKKNDLEAYAILDKAAVPYQVVLTKADKIKPGQLARMKEATLDALKKRPAAHPVVLATSSEKGVGMDEVRATMLQL 212
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT) HSP 1 Score: 157 bits (397), Expect = 8.150e-42 Identity = 92/208 (44.23%), Postives = 112/208 (53.85%), Query Frame = 3 Query: 126 RRSFRAE--FVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLTA 743 RR F A FV A+ +LP AG PEVAF GRSN GKS+LI L G L R S PG T+ +N+F L LVDLPGYG+A+ KK V WN + +YL+GR LRRT VL+D+RHGL+ D M+ L V VLTK +K P L L+ Q RHPA P + SA KG G+ E TL L + Sbjct: 20 RRLFAAPCTFVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDLAG--------RLTLVDLPGYGYAKAPKKLVESWNGLIRNYLKGRAP--LRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATLATLAS 217 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9113.18144.1 >prot_L-elsbetiae_contig9113.18144.1 ID=prot_L-elsbetiae_contig9113.18144.1|Name=mRNA_L-elsbetiae_contig9113.18144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp MRSLAPLRGMSGQLSVATSSPWVWVSQGVDPTSAIRAPPRERRSFRAEFVback to top mRNA from alignment at L-elsbetiae_contig9113:4081..6159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9113.18144.1 ID=mRNA_L-elsbetiae_contig9113.18144.1|Name=mRNA_L-elsbetiae_contig9113.18144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2079bp|location=Sequence derived from alignment at L-elsbetiae_contig9113:4081..6159+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9113:4081..6159+ >mRNA_L-elsbetiae_contig9113.18144.1 ID=mRNA_L-elsbetiae_contig9113.18144.1|Name=mRNA_L-elsbetiae_contig9113.18144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig9113:4081..6159+ (Laminarionema elsbetiae ELsaHSoW15)back to top |