mRNA_L-elsbetiae_contig9105.18137.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A6H5KZ67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ67_9PHAE) HSP 1 Score: 351 bits (900), Expect = 2.150e-119 Identity = 188/237 (79.32%), Postives = 204/237 (86.08%), Query Frame = 1 Query: 1 MLVSAVVAQNRPKSSRKRPRCLSVQHVCKGAVLL-SLLQFTSTISTTAASQPGGGHYLPSGPPQGHDPPDSSFDGGDWGDWRNQPVSEPNQYGTPFSPPIHRRYARPEPMDSLRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND 708 M ++++A+ RP SSRKRPR +VQHV K AVLL SLLQ T TA GGG++ PS PQG+D DSSFDGGDWGDWRNQP+ P +G PFSPPIHRR+ +PEPMD LRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGER R KK+VFHSA+MPSVAVAEFVERVANNIVCPN+CLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND Sbjct: 1 MPTASMLAEFRPPSSRKRPRSRTVQHVSKSAVLLLSLLQLT-----TARRPGGGGYHYPSVTPQGYDSQDSSFDGGDWGDWRNQPIPGPKPHGMPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGR-KKSVFHSATMPSVAVAEFVERVANNIVCPNVCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND 231
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: D8LQ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ63_ECTSI) HSP 1 Score: 259 bits (662), Expect = 1.560e-85 Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 1 Query: 280 PFSPPIHRRYARPEPMDSLRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND 708 PFSPPIHRR+ +PEPMD LRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGER R KK+VFHSA+MPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND Sbjct: 2 PFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGR-KKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND 143
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A7S2PVE5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PVE5_9DINO) HSP 1 Score: 67.0 bits (162), Expect = 1.460e-9 Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 286 SPPIHRRYARPEPMDSLRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKF 675 SPP+ R + E D S+A LEE + L +A VL LA+ LG R H+ ++FH+A P +++ +++ R+A C + CL+L LVY+DRL + V+PL HRL S+++A KF Sbjct: 93 SPPVLPR-SEGEFHDPGASIAAMLEEAGQEGLVSALANVLSHLAS-----LGCRA-HRASIFHAAQTPQISITDYLTRIARYYHCSDSCLVLGLVYIDRLVKLQPDF--VVSPLNVHRLLATSIMLAAKF 213
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A1Y1XV07_9FUNG (Cyclin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV07_9FUNG) HSP 1 Score: 60.5 bits (145), Expect = 6.680e-7 Identity = 27/75 (36.00%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 463 TVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEK 687 T FHS+++P++++ ++ R+ ++I N CL++TL+Y+DR+A +S HL++ T HRL S+ +A KF+ ++ Sbjct: 30 TPFHSSTVPAISIESYIRRIQSSIHFTNNCLLITLIYLDRIAQSTS--HLHINSYTIHRLLLTSITVANKFLNDE 102
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A7S1SBT1_ALECA (Cyclin n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBT1_ALECA) HSP 1 Score: 57.8 bits (138), Expect = 7.190e-7 Identity = 27/72 (37.50%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 460 KTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKF 675 +T+FH+A P+V V++++ER+ + C CL++ LVY+DR+A +E+ ++ LT HRL ++++A KF Sbjct: 36 RTLFHAAREPAVGVSDYLERIRRRLRCSKECLVMALVYLDRIAEADAEVA--ISNLTVHRLLLTAILVASKF 105
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A5A7QWF6_STRAF (Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWF6_STRAF) HSP 1 Score: 58.2 bits (139), Expect = 1.140e-6 Identity = 31/109 (28.44%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 358 EEEDRADLGGYIAVVLQKLANMNELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAE 684 EE A L G+++++LQ++A N+L G R + K +VFH + P++++ +++R+ C C ++ VY+DR + L + HRL S++++ KF+ + Sbjct: 6 EESRSAKLIGFVSLLLQRVAESNDLRCGARAQ-KMSVFHGLTRPTISIHSYLQRIFKYANCSTSCYIVAYVYLDRFT--HTHPTLKINSFNVHRLLITSVMLSAKFMDD 111
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A7S4PH37_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH37_9EUKA) HSP 1 Score: 55.5 bits (132), Expect = 7.040e-6 Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 373 ADLGGYIAVVLQKLANMNELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKF 675 + L +I + +L + GE R ++T FH+ P +++ ++VERV C C ++ LVY++R+ SS+ ++ P+T HRLF ASL++A K+ Sbjct: 9 SSLEEFIDALTTELGELIAFGAGETSR-RETKFHALRAPIISLRQYVERVTTYAPCTVECFVVALVYLNRM---SSQKLGFINPMTIHRLFLASLLLAAKY 105
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: K8YPI9_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YPI9_NANGC) HSP 1 Score: 56.6 bits (135), Expect = 1.110e-5 Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 391 IAVVLQKLANMN---ELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEK 687 + VLQKL ++N E G+ T FH++ PS++VAE++ER+ C + CL+L L+Y+DRL S+ +T L HR+ ++++A KF ++ Sbjct: 16 LGCVLQKLLDVNKRGETAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ 114
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.710e-5 Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 391 IAVVLQKLANMN---ELFLGERVRHKKTVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEK 687 + VLQKL ++N E G+ T FH++ PS++VAE++ER+ C + CL+L L+Y+DRL S+ +T L HR+ ++++A KF ++ Sbjct: 421 LGCVLQKLLDVNKRGESAEGDGNSPTITKFHASRPPSISVAEYLERINKYASCSSECLVLALIYIDRLIQQSN---FALTALNVHRVLITAVMLAAKFFDDQ 519
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Match: A0A7S1PKI7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PKI7_ALECA) HSP 1 Score: 53.9 bits (128), Expect = 6.390e-5 Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 463 TVFHSASMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKF 675 T FHS+ P +++ + R+ N C N CL++ L+Y+DRL +S + V+ L+ HRLF + +A KF Sbjct: 179 TCFHSSYAPKISMPNYTARILRNFACSNQCLIIALIYIDRLVKSNSTM--VVSELSCHRLFITAATLAAKF 247 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9105.18137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9105.18137.1 >prot_L-elsbetiae_contig9105.18137.1 ID=prot_L-elsbetiae_contig9105.18137.1|Name=mRNA_L-elsbetiae_contig9105.18137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp MLVSAVVAQNRPKSSRKRPRCLSVQHVCKGAVLLSLLQFTSTISTTAASQback to top mRNA from alignment at L-elsbetiae_contig9105:236..6244- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9105.18137.1 ID=mRNA_L-elsbetiae_contig9105.18137.1|Name=mRNA_L-elsbetiae_contig9105.18137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6009bp|location=Sequence derived from alignment at L-elsbetiae_contig9105:236..6244- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9105:236..6244- >mRNA_L-elsbetiae_contig9105.18137.1 ID=mRNA_L-elsbetiae_contig9105.18137.1|Name=mRNA_L-elsbetiae_contig9105.18137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig9105:236..6244- (Laminarionema elsbetiae ELsaHSoW15)back to top |