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Homology
BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: A0A2G9GZA7_9LAMI (Serine/threonine protein kinase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GZA7_9LAMI) HSP 1 Score: 57.0 bits (136), Expect = 2.060e-5 Identity = 46/149 (30.87%), Postives = 68/149 (45.64%), Query Frame = 1
Query: 448 LSSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMIPDGRVWGRSGLHHLPALRRIRLNDNDLSGALERPASPRNIVFRDFFGLVSELDRGPTPNQFIFSERAKSKAVIFCWFADNDVRFWQPRSSICSSVDGDTRLACP 894
L +L L+ L NNSL GP P L LL LE + LS N F G IP G + L L ++ L +NDLSG + P ++++ F + + GP P+ + KS +A+N S++C + G + CP
Sbjct: 94 LQNLTLLSKLSFRNNSLHGPLPN-LTNLLRLEFVFLSRNQFLGSIPSGYI-------DLTKLTKLELQENDLSGQIP-PFDQQSLIA---FNVSNNKLEGPIPDTPVLQRFPKSS------YANN--------SALCGGIPG--LIPCP 214
BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: A0A2P6NEJ4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NEJ4_9EUKA) HSP 1 Score: 55.8 bits (133), Expect = 6.310e-5 Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 1
Query: 217 RSLRKFHRAMGGKRWRRKMGWSAAGIDASQFGLNEFDGVTVGLGGHVDKIRLRDNNLSVNIFLRHPVQFERLNRWSILSSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMIPD 588
R+L+ GG W+ GW + G D+ ++ GVT G ++ + L +NNL+ F+ W+ S +LT LDVS N L G P+ L+ LL L L++S N F+G+IP+
Sbjct: 205 RALQNLFNLSGGATWKNNTGWISQGSDSCKY-----FGVTC-QGAYISSLSLSNNNLNGT--------FD--GSWT--SHFSNLTSLDVSLNDLSGRLPDGLSMLLGLTYLNVSFNQFYGLIPN 310
BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: A0A2G2YAD7_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2YAD7_CAPAN) HSP 1 Score: 54.7 bits (130), Expect = 8.070e-5 Identity = 41/113 (36.28%), Postives = 54/113 (47.79%), Query Frame = 1
Query: 391 VNIFLRHPVQFERLNRWSILSSLRHLTVLDVSNN-------------SLRGPFPECLAQLLTLEELDLSHNNFFGMIPDGRVWGRSGLHHLPALRRIRLNDNDLSGALERPAS 690
+ + L F +N S L L HL LD+S N SLRGP PE L+ L ++E L LS N+ G IP SG+ P+L +RLN+N S A+ AS
Sbjct: 26 IELDLHCSQHFGVINSNSSLFQLSHLKKLDLSYNYFYGSHISAKFGRSLRGPIPESLSNLTSIESLFLSQNSLNGTIP-------SGMFSFPSLIYLRLNNNHFSVAMWMSAS 131
BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: UPI000B77515D (probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77515D) HSP 1 Score: 55.1 bits (131), Expect = 9.690e-5 Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 448 LSSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMI 582
L L+HL LD+SNN LRG P CLA L +L++LD+S N+F G I
Sbjct: 189 LCELKHLLKLDMSNNDLRGTLPSCLANLTSLQQLDISSNHFIGNI 233
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 4 |
Model size | 925 |
Cds size | 924 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816986.0018754-CDS-L-elsbetiae_contig9104:1478..1828 | 1622816986.0018754-CDS-L-elsbetiae_contig9104:1478..1828 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 1479..1828 - |
1691683962.3952844-CDS-L-elsbetiae_contig9104:1478..1828 | 1691683962.3952844-CDS-L-elsbetiae_contig9104:1478..1828 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 1479..1828 - |
1622816986.016418-CDS-L-elsbetiae_contig9104:2867..2939 | 1622816986.016418-CDS-L-elsbetiae_contig9104:2867..2939 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 2868..2939 - |
1691683962.4095566-CDS-L-elsbetiae_contig9104:2867..2939 | 1691683962.4095566-CDS-L-elsbetiae_contig9104:2867..2939 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 2868..2939 - |
1622816986.0307949-CDS-L-elsbetiae_contig9104:3304..3718 | 1622816986.0307949-CDS-L-elsbetiae_contig9104:3304..3718 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 3305..3718 - |
1691683962.423504-CDS-L-elsbetiae_contig9104:3304..3718 | 1691683962.423504-CDS-L-elsbetiae_contig9104:3304..3718 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 3305..3718 - |
1622816986.0407772-CDS-L-elsbetiae_contig9104:6115..6203 | 1622816986.0407772-CDS-L-elsbetiae_contig9104:6115..6203 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 6116..6203 - |
1691683962.4367802-CDS-L-elsbetiae_contig9104:6115..6203 | 1691683962.4367802-CDS-L-elsbetiae_contig9104:6115..6203 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9104 6116..6203 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9104.18136.1 >prot_L-elsbetiae_contig9104.18136.1 ID=prot_L-elsbetiae_contig9104.18136.1|Name=mRNA_L-elsbetiae_contig9104.18136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MYIPSPLSRASTPQQDSLSLPPFWPRSMPGLYRPVPQSSVLAYREHHDHD GEAQDEPFVSGTSDSPSAESEARSLRKFHRAMGGKRWRRKMGWSAAGIDA SQFGLNEFDGVTVGLGGHVDKIRLRDNNLSVNIFLRHPVQFERLNRWSIL SSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMIPDGRVW GRSGLHHLPALRRIRLNDNDLSGALERPASPRNIVFRDFFGLVSELDRGP TPNQFIFSERAKSKAVIFCWFADNDVRFWQPRSSICSSVDGDTRLACPPA TSKLRSNP back to topmRNA from alignment at L-elsbetiae_contig9104:1479..6203- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9104.18136.1 ID=mRNA_L-elsbetiae_contig9104.18136.1|Name=mRNA_L-elsbetiae_contig9104.18136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4725bp|location=Sequence derived from alignment at L-elsbetiae_contig9104:1479..6203- (Laminarionema elsbetiae ELsaHSoW15) ATGTACATACCCTCTCCCCTCTCCCGTGCCTCAACCCCTCAACAAGACTC
GCTCTCCCTTCCTCCTTTCTGGCCTCGGAGCATGCCAGGTAGGTCATCAC
CAATCTTCATTGCACATTAGAGAGGTTCAGTTGGTCGATAAGGCACAAGC
GTGCCGAAAACTACCACCGGTTCTAGCGATGTATGTACCAGCTCTGGTAT
GTGTGTTTGCGTCCCATTTATTCGGGCGCCTGCCAGCATGCACGTTGCGG
TGCAGCTATTTTGTATAGCATGACGTGTCCGCCGGGGTCACACAGGAGGG
GATAGATCTTCTTCTCATTTTTTGTTTTTGCCCACCTTCCTCCTGTGGTG
CTTGCCTTGGGTTTTTCCTCCTAGATGTAGAAGTAGATGCGTGTACGAGG
TGCATGGGGAGCATGGCACTCCGCCTCCTCCTTTTAGAAAGGCATGCATA
TAGTCTAGACGTCTAGACTATGCCCATGATGGCTGGAGTAGCTTGTTGCA
TAATCTTCAGTGTTATCAGCTAGACTATCTAGTCTAGTGATGTCGCCGGA
CTCGAGCGGTGTATTTTGCGGTGTATTTTAACTCCAGTCGTATACCTTTT
GTGAGGGTACACACAGTGGCGTTGTAATCGAGTGGTTTGTTTCTATCCTG
GGCATTTGTATAGTGATATCTCCCCTGTTATTAATAACAGGCTCAACAAG
ACAGTAGTATGATTGCCATCTTGTGTATCGAACTATATTCATGGGAGGAG
TAGATGTTGCATAGATTTGTGTATGCGGGAGGATTGTGACGTATGTGGAT
TGTGCGGCGGAATACGAATATCTACTGTATCTATATCCGGCGTCCGGTAA
CCCCTTGTGGGTTTGTGTATTCAGCATTTATCATATATATATGTTCTCTC
TTTTGGTCAACATCCCTTCGGTGTTGTCGATGCAGGTGTGGTTGTGCTTT
GGTCCCTCCTTTGGGTCCAAGATCCAGTAGATTCAACGTCAGGCTCATAT
GTACTACAACAGCAGCATTTTGAACTCGTTTACACACCTGTACGGATAGG
ACAGCACTCGATCAGATGCTGACGGAGCGTGATAGAGAAGCAAGTTTTTA
TACTCACGCTATGAGCCTGGTTTGGCGTGCCTCTCTTCGAGGCGGACCTG
CAATCTCTGCCCCGTTCCCCGACGCCCACCCGCGCGTAAATGTCACATGT
ATGTATGAATGCCTCCTAGAGAGACCTCTCTAGTCCGAAACCCGATTTGC
ACAAAAACAACTCTTCTACCCTTTCGTCGGGAGTCGCCTCCGTAGACAAG
GGCGCCGCACAGGAGAGCTATTCCGCACACCATTGCACCGGGAGTTCTTT
TTTTTTTAAGGTAGGCCACGATCAGTGGCCCGGTAGCGTCCCCTGCTTTA
CTGTTGTACAACCTGGATTAAAAATTTTATCTTGATTATAAAAACAGCAT
GTTGTCGAAATGCCCGACGATTTTCAAAAAATGGGGCACCATCTCCTTTG
CCAGTAGGCTAAGAGATATGTCGAAGGGTATCCCAAAAGAGGGCCATAGC
CGGGGGGCAGGCTTCAAACAGATCCTTGTGCTTCGAGTGGCGGTGTGACA
AAAGAGCATTTTTGGCCCTTTTCGAACGGCTGTAAAATGCGGCCTAACTT
CGACCTCAGCCTACATATGGCGGCGGACGCCATGACAGGTACGCCCAACC
AGAGGCTACGAGGAGACACAGGTGTACTTGAACAGTACCGTAGAGCAATC
TCTGGCGTTCTCAGCAGCGGTGGCAGCCCCGTTTTGAAAGGGCAGTGACG
TTTGCCATGTCGACAGCTCTACAGCGGTCGAATAAGGTTTGATACAAGGA
ACGGAGGGCAGCAAAGGTTCTACAGCACCGCTAAAGAAACGAAGGCCATG
CGATGGTAGCTGTTGTCCTTGGCTTTCGATAATATGTTAACATAGAGGCC
AAGGAGAATGTGCTTCATTTTAAATTGCGATGGCGCTTAGTGCAAAAGCA
AAAAGAGGCCAAAAACACAGTTGCGCCGCGAAGTAACCGTCGTTTTTTTT
AGTTTGACCGAGCACGCACCTGGAAACCACGTCAGCTTTGTTTGGCCGGA
TGCGGACCACAAAACACAGCATGCCTCTTCGCCTTTTCTGGGGTTTGGCC
TTTTCCCCTTAGCCACGTGATCGCGGCCAGAAAATTATATTTTTCAATGT
TTGGCTTTCTTTGCTTTCCTCTCAATCATTGCAATTGGTCTCAAACTCCT
GCTTCGTGCTTGTATACCACACCAGGGCGCACAAGTTGGTTCACAGAGAT
CAGAAGGAGCACATATAGTCTACACTGTGTGTGTGTGATGTTATTTTTTG
CGTGCCCCCCCCCCCCCCCCTAGCTGCATCTAGATGGACTACGTTGTACA
TCTATCTGTGCATAATGCTCCTCTCGGCTGATGACTTGCGGCCATGTGTA
CGTGATGTTGAGTGCCAACCCCGTCCCTTTATCAGGGTTGTACCGTCCCG
TACCTCAGTCGTCGGTGCTGGCATACCGAGAACATCACGATCATGACGGA
GAAGCGCAAGACGAGCCATTCGTTTCTGGCACGAGCGACTCACCGTCAGC
GGAGTCCGAAGCTCGATCCCTCCGCAAATTCCACCGAGCTATGGGAGGCA
AGCGATGGCGGAGAAAGATGGGCTGGAGCGCGGCAGGCATTGATGCCTCT
CAATTCGGCTTGAACGAATTCGACGGCGTCACGGTGGGCCTCGGGGGGCA
TGTCGATAAGATCAGGCTGAGGGATAACAATCTCTCGGTGAACATCTTCC
TACGACACCCGGTGCAATTCGAGAGGTTAAACCGATGGAGCATTTTGAGT
AGCTTGCGACATTTGACCGTGCTGGACGTGAGCAACAATTCCCTGCGAGG
TGCGTATCATACGTTGTGCCAGAACGTGACAATTCTTGTTCCCCAATACG
CTCGCCTGCTAAACTCTTGTCCGTTGAACGATTACATCTAGAATAGTGGG
TGTAAGTTTTCTATCTCAGGAAGAGGGAGGCACTGCGCCCAGAAGAACAC
GAGTAGTGTATGTGTGCGATGTCAAGTGCACGAGTGAAAACGTAGACTAC
AGCTATATCTACCTGTATCACTTACTACGCGTGTTTCTCGGCATCAACTG
GCAAAGTGGATCGAGCCTTAATCCACCATCATGGCTTCGAGTTTAGGCCA
TGGTCTAACCCACGCCGCTCTTTGTCCTGGCGCTACTTGCGTACATACTT
CATATATATGGTAGGACCTTTTCCCGAGTGTTTAGCCCAGCTGCTCACCT
TGGAGGAGCTCGATCTCAGCCACAACAACTTCTTCGGTGAGAGCTAGAAA
AAACAATCGCGTTTCAGAGGGACTCTGGTCTCCCCCGCCCGATAGGTTTG
GGCACTTCCCCTCCGCTCGAAGCGTACACAACCGTTTTGGTGCATGGCCT
TATGCTGTGATAACGTCGCGGGGGTGTCTACGCCTTTCACGGGGGTGATG
ACAACCGATCTTGGGGTTGGCTGGGTTTGAAAAAGACCGAACGAGCACCC
CACAACCACACAGCAGATACATCAGACCAGTAGGGAAGGGTTGCGCAAGA
AGAGAAGTGCTGGTTCGCTCACCCAGCGGCGAGCGGGGCTGCTCTTTACA
TACGTATCACGTAGTTTACCACCCCCTCAAAGTCTGAAATCAAGATACAT
ATTACACCAGTCTAAAATCAAGTCAAAAGAGCCAAAACGGCGGGCGCTCA
AATAAGGTCTGCCTTGGTAAGTTAAGTAGTTTCGGGCATGGAATAACTAG
AGCTAACCATGGAGAGGTGACGTGTGTATTGGCGCGCTTAGATCTGCTGC
TGGAGCGGAGAGATTGAAAGTCGTAGCAGCGACCAAGAATCTCCGCAAAT
TGACCGACACACCCTGTCTCCCACTGCTGTGCCCGCCGCCACGAACCACA
ATCTCCTGAACTGCGGGTGTACAGCAGTAGCTGATACCACTAGCTACTGC
TGAGGGCCCGCAGTTCAGGCGGTTATGGCCCGTGGCGGCAAGCACAGCCG
TGACAAACGTTTGTTGTCGGTCAAATTTGTGGACAGTCCAGCGATTGCTG
CGACCTTCGATATCTCCGCTCCAGCAGCAGATCTGAGCGCGCCAACACAC
ACGTGACTTCTCCATGGTTAGCTCTAGTGATCCCATGCCCGAAACTGCTT
AATTTTCGACGGGAAGTTGGTTTTCGTTATACTCGGCCTTATTATCTTGA
TTTTAGTGTGAAACTGCTTAACCACCGTTGTCAGCACCCCCTTAACCCCT
TGATCTTCCCCAATGCTTACATACGCCCGTACGTTAAACACTGCTGCTGC
AATACCGCATTCAATCATGATGAAGGCATGATCCCTGATGGCAGGGTCTG
GGGGCGCAGCGGACTACATCATCTTCCCGCCCTGAGGCGCATTCGGCTGA
ATGATAATGACCTGTCAGGTGCGCTTGAACGACCCGCGTCACCACGTAAT
ATAGTTTTTAGGGATTTTTTTGGTTTGGTCTCAGAACTCGACAGAGGACC
GACACCAAACCAATTTATTTTTAGCGAGCGTGCGAAGAGCAAAGCGGTCA
TTTTTTGCTGGTTTGCGGATAATGACGTCCGTTTTTGGCAGCCGCGTTCG
TCCATTTGTTCCTCAGTAGATGGAGATACACGTCTTGCTTGCCCTCCCGC
CACGTCCAAATTACGATCAAATCCA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9104:1479..6203- >mRNA_L-elsbetiae_contig9104.18136.1 ID=mRNA_L-elsbetiae_contig9104.18136.1|Name=mRNA_L-elsbetiae_contig9104.18136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1848bp|location=Sequence derived from alignment at L-elsbetiae_contig9104:1479..6203- (Laminarionema elsbetiae ELsaHSoW15) ATGTACATACCCTCTCCCCTCTCCCGTGCCTCAACCCCTCAACAAGACTC GCTCTCCCTTCCTCCTTTCTGGCCTCGGAGCATGCCAGATGTACATACCC TCTCCCCTCTCCCGTGCCTCAACCCCTCAACAAGACTCGCTCTCCCTTCC TCCTTTCTGGCCTCGGAGCATGCCAGGGTTGTACCGTCCCGTACCTCAGT CGTCGGTGCTGGCATACCGAGAACATCACGATCATGACGGAGAAGCGCAA GACGAGCCATTCGTTTCTGGCACGAGCGACTCACCGTCAGCGGAGTCCGA AGCTCGATCCCTCCGCAAATTCCACCGAGCTATGGGAGGCAAGCGATGGC GGAGAAAGATGGGCTGGAGCGCGGCAGGCATTGATGCCTCTCAATTCGGC TTGAACGAATTCGACGGCGTCACGGTGGGCCTCGGGGGGCATGTCGATAA GATCAGGCTGAGGGATAACAATCTCTCGGTGAACATCTTCCTACGACACC CGGTGCAATTCGAGAGGTTAAACCGATGGAGCATTTTGAGTAGCTTGCGA CATTTGACCGTGCTGGACGTGAGCAACAATTCCCTGCGAGGGTTGTACCG TCCCGTACCTCAGTCGTCGGTGCTGGCATACCGAGAACATCACGATCATG ACGGAGAAGCGCAAGACGAGCCATTCGTTTCTGGCACGAGCGACTCACCG TCAGCGGAGTCCGAAGCTCGATCCCTCCGCAAATTCCACCGAGCTATGGG AGGCAAGCGATGGCGGAGAAAGATGGGCTGGAGCGCGGCAGGCATTGATG CCTCTCAATTCGGCTTGAACGAATTCGACGGCGTCACGGTGGGCCTCGGG GGGCATGTCGATAAGATCAGGCTGAGGGATAACAATCTCTCGGTGAACAT CTTCCTACGACACCCGGTGCAATTCGAGAGGTTAAACCGATGGAGCATTT TGAGTAGCTTGCGACATTTGACCGTGCTGGACGTGAGCAACAATTCCCTG CGAGGACCTTTTCCCGAGTGTTTAGCCCAGCTGCTCACCTTGGAGGAGCT CGATCTCAGCCACAACAACTTCTTCGGACCTTTTCCCGAGTGTTTAGCCC AGCTGCTCACCTTGGAGGAGCTCGATCTCAGCCACAACAACTTCTTCGGC ATGATCCCTGATGGCAGGGTCTGGGGGCGCAGCGGACTACATCATCTTCC CGCCCTGAGGCGCATTCGGCTGAATGATAATGACCTGTCAGGTGCGCTTG AACGACCCGCGTCACCACGTAATATAGTTTTTAGGGATTTTTTTGGTTTG GTCTCAGAACTCGACAGAGGACCGACACCAAACCAATTTATTTTTAGCGA GCGTGCGAAGAGCAAAGCGGTCATTTTTTGCTGGTTTGCGGATAATGACG TCCGTTTTTGGCAGCCGCGTTCGTCCATTTGTTCCTCAGTAGATGGAGAT ACACGTCTTGCTTGCCCTCCCGCCACGTCCAAATTACGATCAAATCCAGC ATGATCCCTGATGGCAGGGTCTGGGGGCGCAGCGGACTACATCATCTTCC CGCCCTGAGGCGCATTCGGCTGAATGATAATGACCTGTCAGGTGCGCTTG AACGACCCGCGTCACCACGTAATATAGTTTTTAGGGATTTTTTTGGTTTG GTCTCAGAACTCGACAGAGGACCGACACCAAACCAATTTATTTTTAGCGA GCGTGCGAAGAGCAAAGCGGTCATTTTTTGCTGGTTTGCGGATAATGACG TCCGTTTTTGGCAGCCGCGTTCGTCCATTTGTTCCTCAGTAGATGGAGAT ACACGTCTTGCTTGCCCTCCCGCCACGTCCAAATTACGATCAAATCCA back to top
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