mRNA_L-elsbetiae_contig91.18130.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig91.18130.1
Unique NamemRNA_L-elsbetiae_contig91.18130.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: D7FPX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 2.010e-121
Identity = 197/288 (68.40%), Postives = 224/288 (77.78%), Query Frame = 3
Query:   57 PYLHSS----HALAASWCHRAPAASVGCQRNTAKRRPRWLP--LMEVTQDEMG-DVIEPTLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGKPKVAPWKKPEKENDMFYVEEGAGQAPGNDPVMLLAAIGGILGLSYVFL 899
            P  H S    HA AA+W           +R     R R +P  + +  Q E G +  EP+LE+SLDAIDDV+MDRLPGEGR+KVK+FGAWLDAD+AGRKAGQGNRAAGLIAR   GEEL+DQE AEIFYEEA+++MRRRDCD +VALL+KAV LAG DSRRGGEFKLWAAQALQ   RN QAV+VLKSLK HRD DVRKV AELLYIAQAP+LALN  DFV+FPD S IT+ YD+K++GKPK+APWKK EKE DMFYV E  G  PGNDPVM LAAI GILGLSY+FL
Sbjct:   13 PAFHQSNLQVHAAAAAWT----------RRRVPPTRRRVVPAFMSDPRQGEGGMEFTEPSLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLIARMKNGEELTDQEKAEIFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSHRDFDVRKVSAELLYIAQAPQLALNGEDFVDFPDTSGITDDYDKKDLGKPKIAPWKKSEKEEDMFYVGEDTGVRPGNDPVMFLAAIVGILGLSYMFL 290          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A835ZHV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 8.320e-50
Identity = 112/236 (47.46%), Postives = 142/236 (60.17%), Query Frame = 3
Query:  213 TLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPD--VSRITEPYDRKEMGKPKVAPWKKPEKENDMF-----YVEEGAGQAPGNDPVMLLAAIGGILGLSYVFL 899
            TLE+  D +DD+ MDR   +GRD+VK++GAWLDADIAGR  G  N+AA L A+A  GE L+D+E  E+FYEEA+  M + + D A  LL +AVA  GEDSRRGGEFKLW AQALQ    N  AV +L+S++ H D DVR V  ELLYIA APKL L   D V F     + I + +D     + K  P K P K+  +      YV       P  +P  L  A+  ILG+S + L
Sbjct:   54 TLEEEFDELDDMVMDRPANKGRDQVKIWGAWLDADIAGRNVGSPNKAAALKAKAAAGEALTDREKGEVFYEEAIIYMGKGEYDTAQELLRRAVAFVGEDSRRGGEFKLWLAQALQGVLDNDGAVTLLRSMRTHPDRDVRTVAKELLYIATAPKLDLEAADLVTFGAGLTAGIDDAFDASRYRELKRGP-KVPYKDGQLLEKKPAYVVREYQPPPEANPAFLAVAVAVILGVSALVL 288          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7S2V7T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.590e-45
Identity = 104/228 (45.61%), Postives = 137/228 (60.09%), Query Frame = 3
Query:  228 LDAIDDVYMDRLPGEGRD-KVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGK-PKVA---PWKKPEKENDMFYVEEGAGQAPGNDPVMLLAAIGGILGLSYVF 896
            LD IDD+ M+R P +  D +V+V+GAWLD+DIAGRK     +   L ++ ++GE+L D E AEIF+EEAV  M     D +V L+++AV  AG DSRRGG+F+LW AQ L   G+   A+++L+ LK HRD DVR V AE+LYI +AP++ L   DFVEFPD S I E Y      K PK+     WK+PEKE    YV    G  P  D      A+     L+Y  
Sbjct:   86 LDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVASKTKE--LRSKMNKGEQLEDAEKAEIFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVRTVAAEILYIYEAPRMKLRKEDFVEFPDTSLIDEKYAETVWTKGPKIQVARKWKEPEKEE---YVIRSHGPPPKFDLTFGAIALALFAALTYAM 308          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A6V1UNI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK)

HSP 1 Score: 166 bits (419), Expect = 6.860e-44
Identity = 94/176 (53.41%), Postives = 122/176 (69.32%), Query Frame = 3
Query:  216 LEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRK 743
            LE+ LD IDD+ M R   E RD+VKV+GAWLDADIAGRKAG   +   + A+   GE L+ +E  EIF+EEAV  M R     +VAL+E+AV  AG +S RGG F+LW AQA+   GR + A + LK+L  H D ++R+V AELLYI +AP++ L  +DFVEFPD+S ITE +DRK
Sbjct:   82 LEKELDLIDDITMGRSEME-RDQVKVYGAWLDADIAGRKAGDNRK---IKAKLASGERLAPEERGEIFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIRRVAAELLYIYEAPEIKLTKDDFVEFPDMSTITEKFDRK 253          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7S2BT75_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BT75_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.260e-33
Identity = 89/236 (37.71%), Postives = 136/236 (57.63%), Query Frame = 3
Query:  216 LEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAG-EDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEM-------GKPKVAPWKKPEKENDMFYVEEGAGQAPGN-DPVMLLAAIGGILGLSYVF 896
            +E+ +D IDD+ M+R    GRDKVK++G WLDAD+ GRKAG+ N+AA L       +E+ D  +AE  +   V+ M+  +   A  L  +AV L G   SRRGGE  LW AQA+   G    A+++LK L+ H D  V KV  E+ YI +APKL ++ ++ V+ PD+SR+ +   +++M       G P V  +KKP K++ + +V+E   + P   DPV     +   +G  ++F
Sbjct:   13 VEEEMDRIDDLSMNRPANIGRDKVKMWGVWLDADLVGRKAGK-NQAAFLT------DEVDDDTMAERIFSVGVTQMKLGEYAAAGGLFNRAVGLVGGSSSRRGGEIALWEAQAVHANGDVAAALRLLKGLEQHMDSSVGKVAGEIRYIFEAPKLEMDPDNMVKIPDLSRLDDWDSKRDMRFATQTTGGP-VREFKKPPKKHSLEWVKEQRNEPPAEIDPVQFCLLLSLAVGSIFLF 240          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7S0TAG8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAG8_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.980e-23
Identity = 92/229 (40.17%), Postives = 124/229 (54.15%), Query Frame = 3
Query:  270 EGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEE---LSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEP--YDRKEMGK-PKVAPWKKPEKENDMFYVEEGAGQA----PGN--DPVMLLAAIGGILGL-SYVFLG*RDPG 917
            E   +V++FGA LDA +AG +A   +R+A L   AD  E+   +S ++ AEIFY EAV  M R D D AV LL +A + A   SRRGG+ +LW AQAL  A R  Q V++L  L  H D DVR V  EL++I +AP L LN + ++   D+    +   Y+R   GK  K A   K  +E +   VE    QA    P +  DP + +AA   +L L S  F   R PG
Sbjct:   61 ENEKQVRMFGAKLDASMAGVRAV--SRSAILAVLADEEEDSAGVSTEQKAEIFYAEAVERMNRADYDRAVELLNRATSFARPTSRRGGQMQLWLAQALYAANRRPQCVRLLTVLAKHPDRDVRTVSKELMFIVKAPALVLNSSSYMTI-DLDNFNDDSVYERAPDGKISKRAQTSKLPEEPEYGSVEWALAQAQLEKPSSNFDPALAIAA--SLLCLASLAFF--RQPG 282          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A2V3J3V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR)

HSP 1 Score: 95.1 bits (235), Expect = 4.000e-18
Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 3
Query:  213 TLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQ----------GNRAAGLIARADRGEELSDQEIAE---IFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDV 713
            +L   +D +DD+  DR P     +VK+FGAWLD  +AGRKA +          G+  A    ++ +   +S +E  E     + + +++  +     + AL  +A  + G  SR GG+++LW AQ+L  AG  + A  +L+SL+ H D DVRKV  EL +I  AP L L    F E P +
Sbjct:   54 SLPDDIDQMDDILFDRAPNNVN-QVKLFGAWLDDALAGRKARKNLTPTDKAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVRKVSRELHFIITAPALELAPGTFFEVPSI 232          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7J7ICZ3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICZ3_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 2.700e-17
Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  279 DKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEP 731
            D+ +VFGAWLD  +   +  QG       AR   G   S Q+ AE  + + V  +       A  L+ +A ALAG  +R GGE+ LW AQAL   G+N +A +VL+ L  HRD DVR+V   LLYI QAP+L L    FV+  DV  I +P
Sbjct:  127 DRSRVFGAWLDNQVLEFERIQG------AARQHPGR--SRQKQAENAFAQGVQELNAGQYAKATDLIFRASALAGHQTRLGGEYLLWLAQALDAQGKNTRAQEVLRRLHYHRDNDVRRVAENLLYILQAPRLRLGPESFVQI-DVEAICDP 268          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: M1VAQ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAQ1_CYAM1)

HSP 1 Score: 82.8 bits (203), Expect = 1.300e-13
Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 3
Query:  231 DAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVE 701
            D  DD+  D       D+ +VFGAWLD  +         R   + + A +    + QE AE  +   V  +       A   + +A AL G+ +R GGE+ LW AQAL   G+N +A +VL+ L+ H+D DVR+V   LL+I QAP+L L    FV+
Sbjct:  122 DGYDDISSDSDVDPVLDRGRVFGAWLDNQVL--------RLDRIQSAAMQAPGQTLQERAERAFARGVQALTDGHYATASDAIFQASALPGQQTRLGGEYLLWLAQALDAQGKNARAQEVLRRLQYHKDRDVRQVAESLLFILQAPRLRLGPESFVK 270          
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A0M0JWQ7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JWQ7_9EUKA)

HSP 1 Score: 79.0 bits (193), Expect = 5.820e-13
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 3
Query:  282 KVKVFGAWLDADIAGRK--AGQGNRAAGLIARA-DRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALA--GEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGKPKVAPWKKPEKENDMFYVEE 815
            KV  FGA LD D+AG     GQ NR      +  DRG EL                M R +   AV    +A   A  G   R+GG++ ++ AQALQ A R  +AV++LK  + H D DVRK+   +LY+ QAP+L L   +FV  P +  +     R+ + K +  P   PEK +  +YV E
Sbjct:   42 KVSAFGARLDDDVAGDNLPVGQQNRRMEEYEKMFDRGNEL----------------MLRGEYKAAVKAFTQATVNAPGGMAGRKGGQYAIYLAQALQAADRKPEAVKLLKKCEAHPDGDVRKIADSVLYVMQAPELKLGAENFVTIPSLQEVDSWGARRTLQKKEDPP---PEKYSLEWYVLE 205          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FPX2_ECTSI2.010e-12168.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHV4_9STRA8.320e-5047.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V7T9_9STRA6.590e-4545.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1UNI6_HETAK6.860e-4453.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BT75_9STRA5.260e-3337.71Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S0TAG8_9STRA1.980e-2340.17Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
A0A2V3J3V9_9FLOR4.000e-1833.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7J7ICZ3_9RHOD2.700e-1741.72Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VAQ1_CYAM11.300e-1335.67Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A0M0JWQ7_9EUKA5.820e-1335.52Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig91contigL-elsbetiae_contig91:53570..56799 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score78.6
Seed ortholog evalue5.5e-12
Seed eggNOG ortholog118168.MC7420_550
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SPTR Alr1246 protein
EggNOG OGs1G6IQ@1117,1HBJ8@1150,COG0457@1,COG0457@2
COG Functional cat.S
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_008350.1
Exons5
Model size1394
Cds size882
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816985.4108446-UTR-L-elsbetiae_contig91:53569..535921622816985.4108446-UTR-L-elsbetiae_contig91:53569..53592Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig91 53570..53592 +
1691683961.9303293-UTR-L-elsbetiae_contig91:53569..535921691683961.9303293-UTR-L-elsbetiae_contig91:53569..53592Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig91 53570..53592 +
1622816985.4775572-UTR-L-elsbetiae_contig91:56310..567991622816985.4775572-UTR-L-elsbetiae_contig91:56310..56799Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig91 56311..56799 +
1691683961.989221-UTR-L-elsbetiae_contig91:56310..567991691683961.989221-UTR-L-elsbetiae_contig91:56310..56799Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig91 56311..56799 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816985.4220877-CDS-L-elsbetiae_contig91:53592..538421622816985.4220877-CDS-L-elsbetiae_contig91:53592..53842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 53593..53842 +
1691683961.9427516-CDS-L-elsbetiae_contig91:53592..538421691683961.9427516-CDS-L-elsbetiae_contig91:53592..53842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 53593..53842 +
1622816985.432963-CDS-L-elsbetiae_contig91:54207..543471622816985.432963-CDS-L-elsbetiae_contig91:54207..54347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 54208..54347 +
1691683961.9514856-CDS-L-elsbetiae_contig91:54207..543471691683961.9514856-CDS-L-elsbetiae_contig91:54207..54347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 54208..54347 +
1622816985.4438324-CDS-L-elsbetiae_contig91:54766..549851622816985.4438324-CDS-L-elsbetiae_contig91:54766..54985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 54767..54985 +
1691683961.9606993-CDS-L-elsbetiae_contig91:54766..549851691683961.9606993-CDS-L-elsbetiae_contig91:54766..54985Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 54767..54985 +
1622816985.4548266-CDS-L-elsbetiae_contig91:55176..552871622816985.4548266-CDS-L-elsbetiae_contig91:55176..55287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 55177..55287 +
1691683961.9698188-CDS-L-elsbetiae_contig91:55176..552871691683961.9698188-CDS-L-elsbetiae_contig91:55176..55287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 55177..55287 +
1622816985.4667666-CDS-L-elsbetiae_contig91:56148..563101622816985.4667666-CDS-L-elsbetiae_contig91:56148..56310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 56149..56310 +
1691683961.979931-CDS-L-elsbetiae_contig91:56148..563101691683961.979931-CDS-L-elsbetiae_contig91:56148..56310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig91 56149..56310 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig91.18130.1prot_L-elsbetiae_contig91.18130.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig91 53593..56310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig91.18130.1

>prot_L-elsbetiae_contig91.18130.1 ID=prot_L-elsbetiae_contig91.18130.1|Name=mRNA_L-elsbetiae_contig91.18130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp
MSAVQAFLVQGPYLHSSHALAASWCHRAPAASVGCQRNTAKRRPRWLPLM
EVTQDEMGDVIEPTLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIA
GRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVA
LLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLD
VRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGKPKVAPW
KKPEKENDMFYVEEGAGQAPGNDPVMLLAAIGGILGLSYVFLG*
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mRNA from alignment at L-elsbetiae_contig91:53570..56799+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig91.18130.1 ID=mRNA_L-elsbetiae_contig91.18130.1|Name=mRNA_L-elsbetiae_contig91.18130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3230bp|location=Sequence derived from alignment at L-elsbetiae_contig91:53570..56799+ (Laminarionema elsbetiae ELsaHSoW15)
CTGAGGGAGACGCAAGGATCGAGATGTCTGCTGTGCAAGCATTCTTGGTA CAAGGCCCTTATCTGCACTCATCACACGCGCTCGCAGCGTCATGGTGTCA TCGCGCTCCTGCTGCAAGTGTAGGATGCCAACGCAATACAGCGAAGCGAA GGCCGAGATGGCTGCCCCTCATGGAAGTGACGCAAGATGAGATGGGCGAC GTAATCGAACCTACACTGGAGCAATCATTGGATGCCATTGATGATGTGTA TATGGATAGGCTTCCTGGCGAGGGTGAGTCGTGACCCTGCAATGTGCTGT TGAGTTGCATATGTATACACAAGTGGGACCGTCGCCGGCAACGCCCCTCC CTCTGCTGCGTGCCTCATTCATGATGTATGTACCTCCTACGCAACTGCTG TCTTAGTTTTTGGTGCGCCCTATACAATCACGGACTGCTGCACGTTCGGG CACACGGCGTATGTAGTGAACAAGCGCGGCGTGAGACTCTCATGTGTTTT ATTTTGCGCATAAAATCAGGCGCTCTAGATTGACAAGATAGATATGTAGA CAAGAGCAGCCAAGTGGTAGACTTCCCGTGTGACTTGGAGTACACAGAGT GCGTATTGTAGGTGACCTCGATATCTTGTTGACGGCAGGGCGAGACAAGG TCAAGGTGTTCGGGGCATGGCTCGACGCAGACATTGCCGGCAGAAAGGCG GGGCAAGGAAACAGAGCGGCGGGTCTAATTGCTCGTGCCGATCGAGGGGA AGAGCTGTCAGACCAAGAAATAGCAGAGGTGCGGTGTGAACTGGGATTCA TGCCGTGCAAAAGAGCAGCAGAGTTGGGAAGAGACAAAAGAGTCAAAGCG AACGTGCAGAGATCATTTTGGCATGTAAATTGCAGCAAATTCGGAGAAAA ATGGTTGCTGCAAAATAGAGGCCCGACCTCTATTTGATGGCATTCTGTGC GGGTTGTGCCGTGTGCAATGGCGGCAGATGTTCGTGTATCGTTTGAAGTT ACCATGTGGGCGGAACATGATATGCCATGCTATGTTGTCTTTTTGTCTGG TCATACCCGGGGTCTCCTCGGGGGGGTCAACAAAGTTCTACCTATTATTC TCATCCACCGGGCCGCTTTCTCTCGAGCATCTCCCCCCTCCCCCGTTCGA TTGACATGTACATACATACACGTATCCCTCCACCACCTTTTTTGCAGATT TTCTACGAGGAAGCGGTCTCGGTGATGAGGCGCCGCGACTGCGACAATGC CGTGGCCTTGCTGGAAAAGGCAGTCGCCCTGGCGGGGGAAGACTCGAGGA GAGGCGGCGAGTTCAAGCTTTGGGCGGCGCAGGCACTGCAGGAGGCGGGC AGGAATAAGCAGGCGGTCCAGGTCTTGAAGAGCCTCAAGGGTCACAGAGA CTTGGACGTCCGAAAGGTGTGTGGGCGTATGATATGCGCGTGCATGTTGT TTTTTATATTTTTGTGAACGTTATGGCACAGATCACACCAAAAGTACGTA GTATTCTCCCAAGAACGTACATAAAAATCGCACATGCGCGATCGGCCACG ATGACAGTATTTAAGTATATTTTACGCACAGGTTGCCCCGCTTTTCGCGC CATACAGGTCGGCGCCGAGCTGCTGTACATCGCCCAAGCCCCGAAGCTGG CGCTGAACGACAACGACTTCGTCGAGTTTCCTGACGTGTCCCGCATCACG GAACCATATGATAGGAAGGTATGAGAGCAGACCATCGTCGTTGGCATAGA TGGGCTTTATTCGATTCCTCTTGTGCATGGCCTCGCGGCTTCAAAAGTGC AAGGCCTAAACAAAAGGTGTTGTGTTGCGACAAAAAGTACATATATTTCG TCGAGCACTTCGGCTTTCCATTACTTTGGCGAAGCTCGACCGTGCAAGCT GGCGGTGCGCTTGAGAAAGTGCCTTTTTTGAGCACGTTATGAGACGAAGT GAAAGTGGGTGTACTCTTCGTTTGCCAAGGTTAATATTCCCAAAGGGATC GTGCGAGGAAGAAGTAATGAGATAGGCCGTTGTACGCTCCGGCTCCTTGT TTGGTTTCAATATTCGGGACCGTGCGCCTTGAAGTGTCGTGTTCGGGGTT TGCGTCTCGGTACACGCTGGCAGGTGTTCTCAACCAGCAACGTATTCAGC CTGACAAAGACGGGGGGGACGTGGGTGCTGGGTACGGTATCGCTGGGGAA GACGTTGCGAGGCAGACGTGTAGGTTGTCTCAGTCGCTGTCGCAACATTC GGCTGCATTGCTGCTGCTGCTGCTGCCGAACAGTTGCGCTTCCAAAAACA TTATCGTGTGGTTGTGATGCCGCACTTGATGATTTCGCGTCTCGTCGATA GGGGCCGCTGCTTTAACCGCCATTCTGTAGTCCCTTCCGTTGCCTATGAT TGTGATTCCTCCATCCGGACCGAGTATGCTACATCGGGATGCCAACGTCG GACGCAGCTGACGAAAAAATGTGAAGGGGCCGGAGCACGCTTTCGGCGAG ACACATGCCGCACTTTGTACCTCACTACGATGGATGAAGTTCACCAATCT TGATCCTTCTTGCCTTCCCACCCTCTCAGGAAATGGGAAAGCCCAAAGTG GCTCCGTGGAAAAAGCCGGAGAAGGAAAACGACATGTTTTACGTCGAAGA GGGTGCAGGTCAAGCGCCCGGCAACGATCCTGTGATGCTCTTGGCTGCAA TCGGCGGCATCTTGGGTTTGTCTTACGTGTTCTTGGGGTGACGAGACCCG GGCCGGTGAACCACAAACAACAGCTGAGGCAAATGACACAAAGGCCTCTT TGTTTTGCGTTTCCCTCGACCATAAGTGTGTTCCGCTCGTATGGTTGTGT CGCCGTCTGTACGAGGTGTGCGTTCAGGGGGTTCTTGACAAGACGCGTCG TACAACAGTAGTTGGGAAGTGGCGTGGCGAGCGAACGAGAATTTCTATTG CGGGGAGTTTTTTGCGAGATTTGGTGAATATATCACGTGGGTAGGTTTCT CTCCTTTTTTCGGCCAGAGAATGCCGCTGGGCAAGTATGTTGCTCGGGGA TAGTTTAAGTAGTTAAGGGGGGCATGAAGGTGGCATGGGTCCTCATCCCC TGGGTATCGCGTTTTGCGGGCATCCTTTTACACGTGCAGAGCAAGGTGTT AGAAGAGAGAGCAGGTCCTGCGGATTGCGCGCCAAGGAGAAGAGAAACCT CGTCCGTTGTTCGACAAAATTATGTGAAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig91:53570..56799+

>mRNA_L-elsbetiae_contig91.18130.1 ID=mRNA_L-elsbetiae_contig91.18130.1|Name=mRNA_L-elsbetiae_contig91.18130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig91:53570..56799+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGCTGTGCAAGCATTCTTGGTACAAGGCCCTTATCTGCACTCATC
ACACGCGCTCGCAGCGTCATGGTGTCATCGCGCTCCTGCTGCAAGTGTAG
GATGCCAACGCAATACAGCGAAGCGAAGGCCGAGATGGCTGCCCCTCATG
GAAGTGACGCAAGATGAGATGGGCGACGTAATCGAACCTACACTGGAGCA
ATCATTGGATGCCATTGATGATGTGTATATGGATAGGCTTCCTGGCGAGG
ATGTCTGCTGTGCAAGCATTCTTGGTACAAGGCCCTTATCTGCACTCATC
ACACGCGCTCGCAGCGTCATGGTGTCATCGCGCTCCTGCTGCAAGTGTAG
GATGCCAACGCAATACAGCGAAGCGAAGGCCGAGATGGCTGCCCCTCATG
GAAGTGACGCAAGATGAGATGGGCGACGTAATCGAACCTACACTGGAGCA
ATCATTGGATGCCATTGATGATGTGTATATGGATAGGCTTCCTGGCGAGG
GGCGAGACAAGGTCAAGGTGTTCGGGGCATGGCTCGACGCAGACATTGCC
GGCAGAAAGGCGGGGCAAGGAAACAGAGCGGCGGGTCTAATTGCTCGTGC
CGATCGAGGGGAAGAGCTGTCAGACCAAGAAATAGCAGAGGGCGAGACAA
GGTCAAGGTGTTCGGGGCATGGCTCGACGCAGACATTGCCGGCAGAAAGG
CGGGGCAAGGAAACAGAGCGGCGGGTCTAATTGCTCGTGCCGATCGAGGG
GAAGAGCTGTCAGACCAAGAAATAGCAGAGATTTTCTACGAGGAAGCGGT
CTCGGTGATGAGGCGCCGCGACTGCGACAATGCCGTGGCCTTGCTGGAAA
AGGCAGTCGCCCTGGCGGGGGAAGACTCGAGGAGAGGCGGCGAGTTCAAG
CTTTGGGCGGCGCAGGCACTGCAGGAGGCGGGCAGGAATAAGCAGGCGGT
CCAGGTCTTGAAGAGCCTCAAGGGTCACAGAGACTTGGACGTCCGAAAGA
TTTTCTACGAGGAAGCGGTCTCGGTGATGAGGCGCCGCGACTGCGACAAT
GCCGTGGCCTTGCTGGAAAAGGCAGTCGCCCTGGCGGGGGAAGACTCGAG
GAGAGGCGGCGAGTTCAAGCTTTGGGCGGCGCAGGCACTGCAGGAGGCGG
GCAGGAATAAGCAGGCGGTCCAGGTCTTGAAGAGCCTCAAGGGTCACAGA
GACTTGGACGTCCGAAAGGTCGGCGCCGAGCTGCTGTACATCGCCCAAGC
CCCGAAGCTGGCGCTGAACGACAACGACTTCGTCGAGTTTCCTGACGTGT
CCCGCATCACGGAACCATATGATAGGAAGGTCGGCGCCGAGCTGCTGTAC
ATCGCCCAAGCCCCGAAGCTGGCGCTGAACGACAACGACTTCGTCGAGTT
TCCTGACGTGTCCCGCATCACGGAACCATATGATAGGAAGGAAATGGGAA
AGCCCAAAGTGGCTCCGTGGAAAAAGCCGGAGAAGGAAAACGACATGTTT
TACGTCGAAGAGGGTGCAGGTCAAGCGCCCGGCAACGATCCTGTGATGCT
CTTGGCTGCAATCGGCGGCATCTTGGGTTTGTCTTACGTGTTCTTGGGGT
GAGAAATGGGAAAGCCCAAAGTGGCTCCGTGGAAAAAGCCGGAGAAGGAA
AACGACATGTTTTACGTCGAAGAGGGTGCAGGTCAAGCGCCCGGCAACGA
TCCTGTGATGCTCTTGGCTGCAATCGGCGGCATCTTGGGTTTGTCTTACG
TGTTCTTGGGGTGA
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