mRNA_L-elsbetiae_contig9099.18124.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: D7FM29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM29_ECTSI) HSP 1 Score: 486 bits (1252), Expect = 1.860e-165 Identity = 246/281 (87.54%), Postives = 260/281 (92.53%), Query Frame = 1 Query: 1 QVDSSLVQVDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGSTQSS---VVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPDEALAKELGGNVVFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCNGRPAFKIEPDSIVSVYGGYK 834 +VDS V+VD + SRRKRIIF+RHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLS+RDSVFFDSPLSNTGIQQTQELIRF+QK PDSFSGS VA+AV+ LRGGSTQSS VVVTSNLRRAIATGLI+LWERLRGGEERYLVHSALQEMTFN+DGISLLERGE PDE LAKELGGNVVFDAEFN GTKAL NTG+KRM ALAEWA QRPEDTVVCVGHSLYFRSFFRCFLPQ VHDAKKKK+VNCGVVAFTLESGV GR A+KIEPDSIVSVYGG+K Sbjct: 216 EVDSGKVRVD-STSRRKRIIFIRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSTRDSVFFDSPLSNTGIQQTQELIRFLQKTPDSFSGSGVADAVATLRGGSTQSSQSSVVVTSNLRRAIATGLITLWERLRGGEERYLVHSALQEMTFNIDGISLLERGEKPDEGLAKELGGNVVFDAEFNVGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKMVNCGVVAFTLESGVYEGRQAYKIEPDSIVSVYGGFK 495
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A6H5KZS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS7_9PHAE) HSP 1 Score: 387 bits (994), Expect = 1.690e-129 Identity = 210/296 (70.95%), Postives = 220/296 (74.32%), Query Frame = 1 Query: 1 QVDSSLVQVDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQ-------------------------------------------EMTFNVDGISLLERGETPDEALAKELGGNVVFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLE 759 QVDS V+VD + SRRKRIIF+RHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLS+RDSVFFDSPLSNTGIQQ VA+AV+ LRGGSTQSSVVVTSNLRRAIATGLI+LWERLRGGEERY VHSALQ EMTFN+DGISLLERGE PDE LAKELGGNVVFDAEFN GTKAL NTG+KRM ALAEWA QRPEDTVVCVGHSLYFRSFFRCFLPQ VHDAKKKK+VNCGVVAFTLE Sbjct: 12 QVDSGKVRVD-STSRRKRIIFIRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSTRDSVFFDSPLSNTGIQQ-------------------VADAVATLRGGSTQSSVVVTSNLRRAIATGLITLWERLRGGEERYFVHSALQARRHRRGSSVXXXXXXXMPPLPILSAGYVLCRHDAIYVRAVFQEMTFNIDGISLLERGEKPDEGLAKELGGNVVFDAEFNVGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKMVNCGVVAFTLE 287
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A835ZDW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW6_9STRA) HSP 1 Score: 360 bits (924), Expect = 2.710e-118 Identity = 176/276 (63.77%), Postives = 213/276 (77.17%), Query Frame = 1 Query: 7 DSSLVQVDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPDEALAKELGGNVVFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCNGRPAFKIEPDSIVSVYGGYK 834 D V VDPN + KRI+FLRHGESEWNEVFNRGFGPSFLVRLVSA +RE ++L++RDSVFFDSPLS+TGI+QTQEL+RF+Q+ S + +V E V++L G + + SV+ TSNLRRAIATGLI W+RLR E +LV S LQE+TFNVDGISLLE GE PD ++ + LG + FDAEFNAGTK L + G RM +WA RPEDTVVC GHSL+FR FFR FLP H +K+KKIVNCGV+AFTL+ G NGRPA+K++P SI VYGG+K Sbjct: 58 DPDAVVVDPN-APTKRIVFLRHGESEWNEVFNRGFGPSFLVRLVSALIREALLLTTRDSVFFDSPLSDTGIKQTQELVRFLQRPQGSVADPKVDEIVAILNGEAAKGSVLTTSNLRRAIATGLIVFWDRLRQTRENFLVLSCLQEVTFNVDGISLLENGEVPDGSVGRALGQEIAFDAEFNAGTKGLRSNGYARMGEFCKWASARPEDTVVCAGHSLWFRDFFRNFLPFAARHASKQKKIVNCGVIAFTLQQGTLNGRPAYKVDPASITVVYGGFK 332
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A7S1J5Y9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5Y9_9EUGL) HSP 1 Score: 241 bits (615), Expect = 7.410e-72 Identity = 137/284 (48.24%), Postives = 185/284 (65.14%), Query Frame = 1 Query: 7 DSSLVQ-VDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMML-SSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPDEALAKELGGNV-VFDAEF-----NAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCNGRPAFKIEPDSIVSVYGGYK 834 DS +V+ ++P SRR IIF+RHGES+WN+VFNRGFGPSF VRL A E++++ + DS+FFDSPLS G Q L F++K + +G+E + VLR G T SSV+V+SNLRRA+ATG I W R+R +E+ + S LQE++ NVD ++L G P + +EL G V D ++ N G KALS+ G KRMNA AEW +R E TV+ GHSL+F+ FF +LP+ H A+K K+VN GVVAFTL +GR + I P+SI VYGG++ Sbjct: 57 DSDVVRNMEPQASRR--IIFVRHGESKWNDVFNRGFGPSFPVRLFRAIFEELLIIFQADDSIFFDSPLSPLGDSQVLRLYNFLEKPDNLPAGAE--KDYKVLR-GDTGSSVLVSSNLRRAVATGAIGFWGRIRRTKEKIYILSCLQEISRNVDALALAPTGAVPRIDMPRELDGKAGVLDRQYMEGTWNYGNKALSSNGGKRMNAFAEWVFKRDEGTVIAAGHSLWFKHFFNTYLPRSCDHPARKLKMVNSGVVAFTLNQVKFSGRMVYYIVPESIQVVYGGFE 335
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A7S1X7Z0_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X7Z0_9CHLO) HSP 1 Score: 232 bits (592), Expect = 1.640e-68 Identity = 131/268 (48.88%), Postives = 176/268 (65.67%), Query Frame = 1 Query: 49 KRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLS-SRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGS-TQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPD-EALAKELGGNV----VFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCNGRPAFKIEPDSIVSVYGGY 831 KR+IF+RHGES+WNEVFNRGFGPSF VRL+ A REV LS + DSVF DS LS G+ Q +EL++F++K DS S ++ + ++L+G S T SV+ +SNLRRA+AT I L +RL+ E+ + S LQE++FN+D +L PD A+A E+ +FD N G K + TG++RMNA E R E T++ GHSLYFRSFF+ FLP+ H AKKKK+VN G VAF + V G+ ++IEPDS+ VYGG+ Sbjct: 70 KRVIFIRHGESDWNEVFNRGFGPSFFVRLLKAVFREVGELSITPDSVFIDSALSPLGMFQARELVQFLEK--DS-STTDHPDLHALLKGDSATADSVIFSSNLRRALATAAIGLQQRLQRTGEKCHIASCLQEISFNLDAGALAPALGIPDLHAIAPEMWSTYDPQELFDPSLNTGDKPIFGTGLQRMNAFCELVFGREESTIIATGHSLYFRSFFQTFLPRGAEHVAKKKKMVNSGTVAFNISRAVHAGKQVYRIEPDSVTVVYGGF 334
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A7S4C2E3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C2E3_CHRCT) HSP 1 Score: 222 bits (566), Expect = 2.160e-64 Identity = 126/276 (45.65%), Postives = 171/276 (61.96%), Query Frame = 1 Query: 7 DSSLVQVDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPDEALAKELGGNVVFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVC-NGRPAFKIEPDSIVSVYGGY 831 D L VD R R+IF+RHGES WN VFNRGFGPSF+ RL+S + E+ +L DS F DSPLS G++Q L F++K + E E +++ G S S++V+S LRRA AT ISL ER+ E L+HS+ QE+T NVD S+ RG P EL + D FN G K+L+ TGI+R+N A WA RPE ++ GHSL+FR+FF+ FLP++ H +KK KIVNCG V FTL++G+ G +I+P+S+ +YGG+ Sbjct: 88 DDVLGHVD----REVRVIFVRHGESVWNYVFNRGFGPSFIYRLISTLLYELYLLPLFDSAFLDSPLSQLGLEQCAGLQGFLRKPCIDPAAREDFE--NLVNGESR--SLLVSSQLRRACATLAISLDERISRSHEPILLHSSCQEITRNVDSQSIATRGGAPALYGCDELERPLRLDGTFNRGNKSLAFTGIRRLNDFARWAADRPEQCIIVAGHSLWFRTFFQLFLPKQFEHISKKSKIVNCGAVGFTLQTGLTPEGALRHRIDPESLRVIYGGF 355
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: C1N5E2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N5E2_MICPC) HSP 1 Score: 219 bits (557), Expect = 6.230e-63 Identity = 120/285 (42.11%), Postives = 171/285 (60.00%), Query Frame = 1 Query: 7 DSSLVQVDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGET-PDEALAKELGGNVVFD------AEFNAGTKALSNTGIKRMNALAEWAMQRPEDT--VVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCN-GRPAFKIEPDSIVSVYGGY 831 D + V + R KR+IF+RHGES WNEVFNRGFGP F +RL + E ++ SR S F D+PLS+ G +Q +EL F++ + G+ + LRG S++V SNLRRA+AT I W+R+ E+ +VHSALQEM NVD ++ RGE P + + ++GG D A N G K + G + A W ++ +D V+ GHSL+F+ FF+ FLP+++ H AKKKKIVNCG V FTL++G + GR A++I+P S+ +YGG+ Sbjct: 85 DVVVADVALSPPREKRVIFVRHGESTWNEVFNRGFGPGFPLRLAWGLLHEAAVIFSRGSFFVDAPLSHRGYRQARELRAFLKTYEPTGDGTTTNPDAAALRGDVR--SILVGSNLRRAVATIAIGFWDRIARTREKIIVHSALQEMARNVDAYAIARRGEAVPLDGVEAKIGGGETMDQIPSCDARNNEGNKKVDRCGNDALLEFAAWVVENTKDADCVIVGGHSLWFKEFFKAFLPRRSDHVAKKKKIVNCGCVGFTLQAGRDDDGRVAYRIDPKSVDVIYGGF 367
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A7S0X839_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X839_9CHLO) HSP 1 Score: 211 bits (537), Expect = 6.200e-60 Identity = 118/279 (42.29%), Postives = 163/279 (58.42%), Query Frame = 1 Query: 49 KRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFM-QKAPDSFSGSEVAEAVSVLRGGSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLL-ERGETPDEALAKELGGN---------------VVFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCNGR-PAFKIEPDSIVSVYGGY 831 KR+IF+RHGES WN+VFNRGFGP F VRLV V+E +L SR S F DSPLS G +Q ++L F+ ++A S + A + G T +S+VV SNLRRA+AT I ++RL +E+ V S LQEM NVD +L R P + + + + G + ++ FNAG K + G+ M AEWA+ + DT++ GHSL+F+ FF+ FLP+ ++H KKKKI NCGVV FT++ F+I+PDSI VY G+ Sbjct: 94 KRVIFVRHGESTWNDVFNRGFGPMFPVRLVHGLVQEAGVLISRSSYFVDSPLSKLGYKQAKDLRVFLKEQAAASTHPGDAGAADAAALAGVTGTSIVVASNLRRAVATTAIGFYDRLARTQEKVYVLSCLQEMARNVDAYALAGAREAVPLDGIEEHIAGYGLEASGLRTGDSGSVIGLNSHFNAGNKPIKRNGMNSMTEFAEWAVAQDADTIIAGGHSLWFKEFFKAFLPKSSLHKCKKKKIANCGVVGFTIQHAKHPTHGDMFRIDPDSIDVVYLGF 372
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A061SJ00_9CHLO (Uncharacterized protein (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SJ00_9CHLO) HSP 1 Score: 209 bits (532), Expect = 1.790e-59 Identity = 115/252 (45.63%), Postives = 167/252 (66.27%), Query Frame = 1 Query: 1 QVDSSLVQVDPNNSRRKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRG-GSTQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPD-EALAKELGGNV----VFDAEFNAGTKALSNTGIKRMNALAEWAMQRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCG 738 ++D +V+ D + +K ++F+RHGES+WNEVFNRGFGP+F VRLV A RE+++L + DSVF DS LS G+ Q ++L+ F+ + + ++ A+ ++LRG S SSVVV+SNLRRA+AT I L RL+ +ER L+ S LQE++FN+D +L E PD A+A E+ + +FD N+G K + G++RM+ E+ R ED V+ VGHSLYFRSFFR FLP + H+AK++K+ N G Sbjct: 57 RLDPEVVK-DTKPADKKLLVFIRHGESDWNEVFNRGFGPTFFVRLVKAIYREMLLLVTSDSVFIDSSLSPLGVAQARDLLSFLDQPA---TPADNADLHALLRGENSVTSSVVVSSNLRRALATAAIGLQPRLKETKERVLISSDLQEISFNLDANALAPPLEVPDLHAIAPEMWASFQPSELFDPGLNSGNKPIFGNGLQRMHNFCEFVFSREEDAVIAVGHSLYFRSFFRTFLPFGSDHEAKRRKMANAG 304
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Match: A0A7S4KNK0_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KNK0_9EUKA) HSP 1 Score: 211 bits (536), Expect = 4.780e-59 Identity = 119/271 (43.91%), Postives = 167/271 (61.62%), Query Frame = 1 Query: 46 RKRIIFLRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRGGS-TQSSVVVTSNLRRAIATGLISLWERLRGGEERYLVHSALQEMTFNVDGISLLERGETPDEALAKE------LGGNVVFDAEFNAGTKAL-SNTGIKRMNALAEWAM-QRPEDTVVCVGHSLYFRSFFRCFLPQKTVHDAKKKKIVNCGVVAFTLESGVCNGRPAFKIEPDSIVSVYGGY 831 RKRI+F+RHGESEWNE+FNRGFG F RL FVRE+++L+SRDSVF DS LS GI+Q +EL F+++ ++ +V VS+LRG T S++++SNLRRAIAT ++L R+ +E+ +HSALQE++ N+D S+ E PD + + + + VF+A N G K L + G+KRM W Q E +V GHS YFR+FFRCFL H ++K + N VVAF LE +G+ F+I DS+ V+ G+ Sbjct: 158 RKRIVFIRHGESEWNEIFNRGFGIGFFFRLARGFVREILLLTSRDSVFVDSSLSEEGIEQIEELHYFLRERKNNGVHEDV---VSLLRGDEGTDDSIILSSNLRRAIATAALALRHRISKSKEQVYIHSALQEVSRNIDANSISRPCEVPDLHVIQSRLEDDAIDYDAVFNASLNGGQKVLLRSNGLKRMKEFNRWIFNQSKEAVIVGGGHSFYFRAFFRCFLDTDDEHYSQKYIMKNGAVVAFDLEYAKVDGKDRFRIPLDSMKEVFSGH 425 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9099.18124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9099.18124.1 >prot_L-elsbetiae_contig9099.18124.1 ID=prot_L-elsbetiae_contig9099.18124.1|Name=mRNA_L-elsbetiae_contig9099.18124.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp MMLSSRDSVFFDSPLSNTGIQQTQELIRFMQKAPDSFSGSEVAEAVSVLRback to top mRNA from alignment at L-elsbetiae_contig9099:127..5836+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9099.18124.1 ID=mRNA_L-elsbetiae_contig9099.18124.1|Name=mRNA_L-elsbetiae_contig9099.18124.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5710bp|location=Sequence derived from alignment at L-elsbetiae_contig9099:127..5836+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9099:127..5836+ >mRNA_L-elsbetiae_contig9099.18124.1 ID=mRNA_L-elsbetiae_contig9099.18124.1|Name=mRNA_L-elsbetiae_contig9099.18124.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig9099:127..5836+ (Laminarionema elsbetiae ELsaHSoW15)back to top |