mRNA_L-elsbetiae_contig9095.18123.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9095.18123.1
Unique NamemRNA_L-elsbetiae_contig9095.18123.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: D8LJI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI7_ECTSI)

HSP 1 Score: 539 bits (1388), Expect = 2.010e-183
Identity = 364/545 (66.79%), Postives = 400/545 (73.39%), Query Frame = 1
Query:    1 QFGMSWRLIQLLFLKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEVNVPAEDLMVPVEDVPCLSLDCTGRHASEVASLCQPGQVIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDITGITGTDGTITAAADS-----AGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGERFEWEEASDGEAAGAGVGGGGLWPGLADVAEAVGKRVGWFPRMRTAEASLLQAEAVDEQHNHTATGXXXXXXLDSVDNVPLSPLGEGIPWAQGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------------LTAIEKAKQAPLRFYLVREGHKFVAVGRQRTKGAWKELPEMVAPATRGDGIPIVLDPSPYQVTHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITRDSLADFVDQREVSPMDDCLR-CGAAA 1575
            QFGMSWRLI LL +KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGE+A+W+D  +DSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKG+YDALMDTN TPHLEE      DLM+  E++PC SL+CT R +SE A    PGQ  PV +SM+DKVLVGVVLWNDLAIALADYRRRGSSI  I+  T    +I ++  +     A               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       W                  WP LA+V  A+G+R+GWFP +RTAEASLL+  A          G          D   LSPLGEGIP   G AAXXXXXXXXXXXXXXXXXXXXXXX    +              +  IEKAK+AP+RFYLVREGH+FV VGR   KGAWKELPE+  PA R + IP+VLDPSPYQV+HTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITR++LADFVD REVSPMDDC+R CGA A
Sbjct:   45 QFGMSWRLISLLLIKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCLDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEE------DLMIKAEEIPCPSLECTWRDSSEEALRYLPGQFKPVGESMSDKVLVGVVLWNDLAIALADYRRRGSSITAISSTTTAPASINSSRGAPLPAFASTTTMIDGRRFQVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW------------------WPRLAEVGGAIGRRIGWFPMVRTAEASLLRELA----------GKREDGGXXXXDAGSLSPLGEGIPLGGGTAAXXXXXXXXXXXXXXXXXXXXXXXRRTRSSRKALSPAPPVPVPVAGIEKAKRAPIRFYLVREGHRFVPVGRNPKKGAWKELPEVAIPAAR-ESIPVVLDPSPYQVSHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITREALADFVDDREVSPMDDCVRLCGALA 554          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A6H5K923_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K923_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 3.870e-183
Identity = 391/555 (70.45%), Postives = 422/555 (76.04%), Query Frame = 1
Query:    1 QFGMSWRLIQLLFLKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEV-----NVPAEDLMVPVEDVPCLSLDCTGRHASEVASLCQPGQVIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDITGITGTDGTITAAADSAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGERFEWEEASDGEAAGAGVGGGGLWPGLADVAEAVGKRVGWFPRMRTAEASLLQAEAVDEQHNHTATGXXXXXXL--------------------DSVDNVPLSPLGEGIPWAQGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA----LTAIEKAKQAPLRFYLVREGHKFVAVGRQRTKGAWKELPEMVAPATRGDGIPIVLDPSPYQVTHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITRDSLADFVDQREVSPMDDCLR-CGAAA 1575
            QFGMSWRLI LL LKFW TIFSVVQPLPVGLFSPIFVIGGLMGRIFGE+A+W+D   DSVNI FQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTN TPHLEEV     NVPAED+M+ V+++PCLSLDCTGR ASEVAS CQPG  IPVVQSM+DKVLVG+VLWNDLAIALADYR+RGSSI  I+                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            P LA+V  AVG+R+GWFP +RTAE SLLQ   +D +   T   XXXXXX                     D  D++P  PLGEGIP   G   XXXXXXXXXXXXXXXXXXXXXXXXXXX     +  IEKAK+AP+RFYLVREGH+FV VGR   KGAWKELPE+  P  R + IP+VLDPSPYQV+HTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITR++LADFVD REVSPMDDC+R CGA A
Sbjct:  191 QFGMSWRLISLLLLKFWATIFSVVQPLPVGLFSPIFVIGGLMGRIFGEVANWVDHCFDSVNIKFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNKTPHLEEVPPEDQNVPAEDVMIKVDEIPCLSLDCTGRDASEVASRCQPGHFIPVVQSMSDKVLVGIVLWNDLAIALADYRKRGSSITAISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------XXPRLAEVGGAVGRRMGWFPMVRTAEVSLLQE--LDRRRAETXXXXXXXXXXXXXXXXXGEGAGKREDGCGDDGSDSLP--PLGEGIPLGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGIEKAKRAPVRFYLVREGHRFVPVGRNPKKGAWKELPEVAIPTAR-ESIPVVLDPSPYQVSHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITREALADFVDDREVSPMDDCVRLCGALA 714          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A835YU91_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU91_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.670e-58
Identity = 169/524 (32.25%), Postives = 233/524 (44.47%), Query Frame = 1
Query:    7 GMSWRLIQLLFLKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEVN-----VPAEDLMVPVEDVPCLSLDCTGRHASEVASLCQPGQ--VIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDITGITGTDGTITAAADSAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGERFEWEEASDGEAAGAGVGGGGLWPGLADVAEAVGKRVGWFPRMRTAEASLLQAEAVDEQHNHTATGXXXXXXLDSVDNVPLSPLGEGIPWAQGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXALTAIEKAKQAPLRFYLVREGHKFVAVGRQRTKGAWKELPEMVAPATRGDGIPIVLDPSPYQVTHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITRDSLADFVDQREVSPMDDCL 1557
            G+S+ L   + +K    + SV QPLPVGLF+P+F++G   GR+FGE+A + +  +  +++ FQPWEFA+IG+AA S  +TRAVSTA+IVFE+SGEN LRLPLG+A++I++ IA+RFTKG YD+L+DTN  P+L  +      V  E +MVP  ++P LSL  T   AS +     P    VIPVVQ++TD VLVG VL  DL +A+ADY  R                  A A+                                                      ++AS  E                                    A L +A  V+E    +  G                                                                   A LRF +V+ G K   V    T+G    +  M+   T  D IPIV+DPSP QV H+TEL K+D  FR+L+LD A+VC AG+LVG +TR ++  FV  RE  P+D+C+
Sbjct:  382 GVSYELALFVPIKALAILLSVTQPLPVGLFAPVFLLGAAFGRLFGEVARYANLSMGLMHLTFQPWEFAVIGAAALSGSITRAVSTAIIVFEMSGENCLRLPLGLAVLIAHTIASRFTKGAYDSLVDTNSAPYLPTLPPQAYLVEVESIMVPAANLPFLSLSTTYSAASRLLRQHTPTTCAVIPVVQTVTDMVLVGAVLRRDLELAVADYEER-----------------VAVAE------------------------------------------------------KDASPDET-----------------------------------ARLAEAVKVNESLQGSLDGSLFGG--------------------------------------------------------------AHLRFVVVKGGGKVAPV--VDTRGTAYCMQHMLR-LTSIDTIPIVMDPSPLQVAHSTELRKLDYMFRMLKLDIAFVCRAGKLVGWVTRGTIRRFVGAREPQPIDECI 734          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: W7UA92_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA92_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.130e-52
Identity = 166/513 (32.36%), Postives = 231/513 (45.03%), Query Frame = 1
Query:   43 KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEVN-----VPAEDLMVPVEDVPCLSLDCTGRHASEVASLCQPGQ-VIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDITGITGTDGTITAAADSAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGERFEWEEASDGEAAGAGVGGGGLWPGLADVAEAVGKRVGWFPRMRTAEASLLQAEAVDEQHNHTATGXXXXXXLDSVDNVPLSPLGEGIPWAQGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXALTAIEKAKQAPLRFYLVREGHKFVAVGRQRTKGAWKELPEMVAP-ATRGDGIPIVLDPSPYQVTHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITRDSLADFVDQREVSPMDDCLR 1560
            KF  T   V  PLPVGLF+P FV GG +GR+FGE+ H+   Y      + +PWEFA+IG+AAFS+GVTRAVSTAVIVFELSG+NHLRLP+ VAL+++YF+ANRFTK +YD L+DTNGTP L E+      V A  +M PV+  P L+L  T   A +V   C   + +IPVV +     L G VL  DL +A+     +  ++ D     G +  +      +GA                                           TG+ F   + +                  +D +E            +    S LQ  + DE+                 +   L  +G G                                    + +A   A   PL   ++R+      +    T    + L  + +  AT     P+++DPSPYQV   T LSKVD +FR+L++  AYV  +GRL+GV+TRDSL +FV  RE  PM  CL+
Sbjct:  511 KFLVTALCVSLPLPVGLFTPTFVTGGAVGRLFGEIVHFF--YPTDRITSLEPWEFAVIGAAAFSSGVTRAVSTAVIVFELSGQNHLRLPISVALLLAYFVANRFTKNVYDELLDTNGTPSLPELPAELYMVTAAQVMRPVDQGPYLTLSSTFAEAEKVLLRCGGSEWLIPVVDTDESMHLQGAVLAEDLKVAVNGLYVQLHALED-----GEEECVRTQPGGSGA------------------------------------SHRLGRETGKEFLRRKVT-----------------FSDDSE------------QEKRGSTLQRGSEDEKKG-------------PAEAPDLGVVGGG------------------------KDEEGREDHIDLSNSAKSVAMGMPLHIVVLRDRDTVDTL----TPSRRRRLSSLSSSKATYLTPPPLIMDPSPYQVGDRTLLSKVDFSFRMLKVTQAYVVRSGRLLGVLTRDSLTEFVGTREKKPMHRCLQ 910          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A7S2DMH5_9STRA (Chloride channel protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMH5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.500e-44
Identity = 103/223 (46.19%), Postives = 146/223 (65.47%), Query Frame = 1
Query:   43 KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHL-----EEVNVPAEDLMVPVE-----------------DVPCLSLDCTGRHASEVASLCQPGQVIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDIT 645
            K++ TI SV  PLPVGLF+P+F+ GG +GR+FGE  H    Y  ++    +PWEFA++GSAAFSAGVTR VSTAVI+FEL GE HLRLPL VA++++YFIANRF K IYDAL+DTNGTP L     ++ ++ A+++MVP++                 ++  L+L  +  +A ++ SL +  + IPVV++  +  LVG V  +DL  AL    R  S ++D+T
Sbjct:   55 KYFMTIISVTLPLPVGLFTPVFITGGAIGRVFGEAIH---LYFPAITA-LEPWEFAVVGSAAFSAGVTRVVSTAVILFELVGEPHLRLPLSVAILVAYFIANRFCKNIYDALIDTNGTPTLLPLERKKYHMSAKEVMVPIKTLDAFISDDGIGEDGSPEMTYLTLSSSYNYARKLLSLYKL-EAIPVVETSNNMSLVGTVHRSDLKRAL----RSMSYMLDMT 268          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A7S0SPL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SPL1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 6.440e-39
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   43 KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEV-----NVPAEDLMVPVEDVPCLSLDCT 480
            KF  T F V  PLPVGLF+P+F+ G ++GRI GE+A+ +         +  PWEFA++G+AA++ GVTRA+STAVIVFELSG  HLRLP+ +A++ SYF+ NR +K IYD L DTNGTP L ++     +VP   +M  ++D   LSLD T
Sbjct:   67 KFIETAFCVTLPLPVGLFTPVFLNGSVLGRILGEIANSIPNLT-----SIPPWEFAVVGAAAYATGVTRAISTAVIVFELSGLRHLRLPISLAVLASYFVGNRLSKNIYDVLSDTNGTPFLPDLPKVLYSVPVSKVMALIDDTKVLSLDST 212          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A7S3GUC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUC0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.150e-35
Identity = 73/158 (46.20%), Postives = 109/158 (68.99%), Query Frame = 1
Query:   43 KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEV-----NVPAEDLMVPVEDVPCLSLDCTGRHASEV 501
            KF  T+ SV  PLPVGLF+P FV GGL+GRI GE+      +       + PWE+AL+G+AAFS GVTRA+STAVI+FEL+ + HL LP+ V ++ ++F+ NRFTK +YD LM+ NG P+++++      VP  ++M+P+ +   L+LD + R A+++
Sbjct:   37 KFIATLLSVTLPLPVGLFTPTFVTGGLLGRILGEILKTKPGFD-----TYAPWEYALLGAAAFSTGVTRAISTAVIIFELACQPHLGLPISVVVLTAHFVGNRFTKNVYDVLMEANGGPYMDDLPPKLYTVPVRNVMMPIVEHHVLALDSSYRDAADL 189          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A7S3NNS7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNS7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.240e-34
Identity = 82/159 (51.57%), Postives = 103/159 (64.78%), Query Frame = 1
Query:   43 KFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAH----------WMDRYVDSVNI---------NFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEVNVPAEDLMVPVEDVPC 462
            KF TTI SVV PLPVG+F P FV G  +GR  GE+ H          W+D   D  N           F PWE+A+IG+AAF+AGVTRA+STAVI  EL+GENHLR+PL ++ ++++FI NRFTK IYDAL+DTNGTP L ++  P     +PV  V C
Sbjct:  419 KFVTTIISVVLPLPVGVFKPTFVCGAAIGRAIGEVLHSLAANYADRKWIDSLTDVDNTAHSTMPIITQFMPWEYAVIGAAAFAAGVTRALSTAVIFLELAGENHLRIPLLLSTLVAHFIGNRFTKPIYDALIDTNGTPTLPDL--PERCYYLPVRAVMC 575          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: A0A662WI73_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WI73_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.340e-34
Identity = 84/217 (38.71%), Postives = 136/217 (62.67%), Query Frame = 1
Query:   10 MSWRLIQLLFLKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEV-----NVPAEDLMVPVEDVPCLSLDCTGRHASEVASLCQPGQVIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDIT 645
            +S  L+  L LK+  T+ S+V P+P GLF+P F+IGG+ GR+ GE      R  D ++  ++P+EFA+IG+ AFS+GVT AVSTAVI+ E+S  + L LP+ VA++ +YF A RFT+ +YD L+ T+  P L+++     ++PA ++M  V D+  L+ D T + A  +    +   V P+V S+ ++ L+  V    LA A+   +R+G++ I +T
Sbjct:  436 LSRSLLTFLPLKYVLTLVSIVLPVPAGLFTPTFIIGGIFGRLVGEAV----RAFDLLHTRYEPFEFAIIGAGAFSSGVTHAVSTAVIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSNLPRLKKLPKAAYDIPAWEVMKDVADMGVLTADSTYKDALILLERAEMEPVFPIVDSLENRFLLATVTRTRLADAVGYCQRQGAAPIALT 648          
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Match: G5ACT7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5ACT7_PHYSP)

HSP 1 Score: 149 bits (376), Expect = 1.480e-34
Identity = 84/217 (38.71%), Postives = 136/217 (62.67%), Query Frame = 1
Query:   10 MSWRLIQLLFLKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWMDRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNGTPHLEEV-----NVPAEDLMVPVEDVPCLSLDCTGRHASEVASLCQPGQVIPVVQSMTDKVLVGVVLWNDLAIALADYRRRGSSIIDIT 645
            +S  L+  L LK+  T+ S+V P+P GLF+P FVIGG+ GR+ GE      R  D ++  ++P+EFA+IG+ AFS+GVT AVSTAVI+ E+S  + L LP+ VA++ +YF A RFT+ +YD L+ T+  P L+++     ++PA ++M  V ++  L+ D T   A  +        V P+V S+ ++ L+  V  + LA A++  +R+G++ I +T
Sbjct:  488 LSRSLVTFLPLKYVLTLISIVLPVPAGLFTPTFVIGGIFGRLVGEAV----RAFDLLSTRYEPFEFAIIGAGAFSSGVTHAVSTAVIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSNLPRLKKLPKAAYDIPAWEVMKDVAEMGVLTADSTYADALALLKRSDMEPVFPIVDSLENRFLLATVTRSRLAYAVSRCQRQGATPIALT 700          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9095.18123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJI7_ECTSI2.010e-18366.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K923_9PHAE3.870e-18370.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU91_9STRA1.670e-5832.25Chloride channel n=1 Tax=Tribonema minus TaxID=303... [more]
W7UA92_9STRA2.130e-5232.36Chloride channel protein n=2 Tax=Monodopsidaceae T... [more]
A0A7S2DMH5_9STRA3.500e-4446.19Chloride channel protein n=1 Tax=Dictyocha speculu... [more]
A0A7S0SPL1_9STRA6.440e-3950.99Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S3GUC0_9STRA1.150e-3546.20Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3NNS7_9STRA1.240e-3451.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A662WI73_9STRA1.340e-3438.71Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
G5ACT7_PHYSP1.480e-3438.71Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9095contigL-elsbetiae_contig9095:231..7567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score534.3
Seed ortholog evalue6.5e-149
Seed eggNOG ortholog2880.D8LJI7
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005247,GO:0005253,GO:0005254,GO:0006810,GO:0006811,GO:0006820,GO:0006821,GO:0008150,GO:0008308,GO:0008509,GO:0015075,GO:0015103,GO:0015108,GO:0015267,GO:0015318,GO:0015698,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:1902476
EggNOG free text desc.voltage-gated chloride channel activity
EggNOG OGsCOG0038@1,KOG0476@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1578
Cds size1569
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816984.4111795-CDS-L-elsbetiae_contig9095:230..4161622816984.4111795-CDS-L-elsbetiae_contig9095:230..416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 231..416 -
1691683961.0587578-CDS-L-elsbetiae_contig9095:230..4161691683961.0587578-CDS-L-elsbetiae_contig9095:230..416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 231..416 -
1622816984.4229267-CDS-L-elsbetiae_contig9095:944..12281622816984.4229267-CDS-L-elsbetiae_contig9095:944..1228Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 945..1228 -
1691683961.071448-CDS-L-elsbetiae_contig9095:944..12281691683961.071448-CDS-L-elsbetiae_contig9095:944..1228Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 945..1228 -
1622816984.437002-CDS-L-elsbetiae_contig9095:1437..15531622816984.437002-CDS-L-elsbetiae_contig9095:1437..1553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 1438..1553 -
1691683961.0835032-CDS-L-elsbetiae_contig9095:1437..15531691683961.0835032-CDS-L-elsbetiae_contig9095:1437..1553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 1438..1553 -
1622816984.447064-CDS-L-elsbetiae_contig9095:1859..23031622816984.447064-CDS-L-elsbetiae_contig9095:1859..2303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 1860..2303 -
1691683961.093871-CDS-L-elsbetiae_contig9095:1859..23031691683961.093871-CDS-L-elsbetiae_contig9095:1859..2303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 1860..2303 -
1622816984.458855-CDS-L-elsbetiae_contig9095:3375..35101622816984.458855-CDS-L-elsbetiae_contig9095:3375..3510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 3376..3510 -
1691683961.1043272-CDS-L-elsbetiae_contig9095:3375..35101691683961.1043272-CDS-L-elsbetiae_contig9095:3375..3510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 3376..3510 -
1622816984.4691432-CDS-L-elsbetiae_contig9095:4827..50451622816984.4691432-CDS-L-elsbetiae_contig9095:4827..5045Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 4828..5045 -
1691683961.114398-CDS-L-elsbetiae_contig9095:4827..50451691683961.114398-CDS-L-elsbetiae_contig9095:4827..5045Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 4828..5045 -
1622816984.4792674-CDS-L-elsbetiae_contig9095:6815..69261622816984.4792674-CDS-L-elsbetiae_contig9095:6815..6926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 6816..6926 -
1691683961.1258662-CDS-L-elsbetiae_contig9095:6815..69261691683961.1258662-CDS-L-elsbetiae_contig9095:6815..6926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 6816..6926 -
1622816984.4905398-CDS-L-elsbetiae_contig9095:7483..75581622816984.4905398-CDS-L-elsbetiae_contig9095:7483..7558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 7484..7558 -
1691683961.1373725-CDS-L-elsbetiae_contig9095:7483..75581691683961.1373725-CDS-L-elsbetiae_contig9095:7483..7558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9095 7484..7558 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816984.5010116-UTR-L-elsbetiae_contig9095:7558..75671622816984.5010116-UTR-L-elsbetiae_contig9095:7558..7567Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9095 7559..7567 -
1691683961.1489954-UTR-L-elsbetiae_contig9095:7558..75671691683961.1489954-UTR-L-elsbetiae_contig9095:7558..7567Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9095 7559..7567 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9095.18123.1prot_L-elsbetiae_contig9095.18123.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9095 231..7558 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9095.18123.1

>prot_L-elsbetiae_contig9095.18123.1 ID=prot_L-elsbetiae_contig9095.18123.1|Name=mRNA_L-elsbetiae_contig9095.18123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=523bp
MSWRLIQLLFLKFWTTIFSVVQPLPVGLFSPIFVIGGLMGRIFGEMAHWM
DRYVDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLP
LGVALMISYFIANRFTKGIYDALMDTNGTPHLEEVNVPAEDLMVPVEDVP
CLSLDCTGRHASEVASLCQPGQVIPVVQSMTDKVLVGVVLWNDLAIALAD
YRRRGSSIIDITGITGTDGTITAAADSAGALLLASKAAAAATGLRRRRPA
AAAAAAAAAGAGLLDTAAAAAASTGERFEWEEASDGEAAGAGVGGGGLWP
GLADVAEAVGKRVGWFPRMRTAEASLLQAEAVDEQHNHTATGGGGGGGLD
SVDNVPLSPLGEGIPWAQGNAAAAAAAAAAVASVDTNGGGRRPPQKAAAA
LTAIEKAKQAPLRFYLVREGHKFVAVGRQRTKGAWKELPEMVAPATRGDG
IPIVLDPSPYQVTHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITRDSL
ADFVDQREVSPMDDCLRCGAAA*
back to top

mRNA from alignment at L-elsbetiae_contig9095:231..7567-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9095.18123.1 ID=mRNA_L-elsbetiae_contig9095.18123.1|Name=mRNA_L-elsbetiae_contig9095.18123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7337bp|location=Sequence derived from alignment at L-elsbetiae_contig9095:231..7567- (Laminarionema elsbetiae ELsaHSoW15)
CAGTTCGGGATGTCTTGGCGGCTCATCCAGCTGCTGTTCCTAAAGTTCTG GACGACGATATTCTCCGTGGTCCAGCCGCTGCCGGTGAGGAAAGGGTTCT GGTTCGTTCTCATGTGCGCGCTCTTAGGTATTTACTCGCACGCGTCGTGT CGTCGTCTGGGTTGTTGACAGTCCCCGTGACAGTTCCGTTGCTGATGTTA TTGGCGTCGTGCCCTCGCGACAACAACAACAACAACAACAACACCTGACA CTTAATCGCTACCATAGAACAGGTTTTGCCGTCGACCGCGCGTGTGATGG CGAGGCCGGGGGGGCCGGTGGGGTGGGGTGGGGTGGGGTGGGCCTGTCTC CCGCTGCTTCTGTATCGTTGTGGCAAATTAAAATTGTCGTACACTACATA CTTCTATATTATCAGCACGCGACAAATACGAAACGCGCTGATTTTTCAAT ATGTAGACTACTCCTAGTATTTGACATCACATCACGGCGTATTATAGGTA AATATGCCGCCGACATTCAGCAGCGAGCCCTTTTTACAGCTGAAAGCTGC AACAGGTAGTAGTCTCGGCAGGCGGCGCGCCCCGGTCCTCCTTTTTTATC TCGGGGTAAACAACCGCCGCACAAAAACGCTCCAACTACAGGTTGGGCTG TTCAGCCCTATCTTCGTGATTGGCGGGCTGATGGGGAGAATATTCGGAGA AATGGCCCATTGGATGGACCGGTACGTGGACAGCGTCAACATCAACTTTC AGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGC CCCCAAAAGTTGTCAAGGGTGCAGCTTTTCAGCGTGCATGTATGTATAAG TTAGTTAGTTACATAGCACGAACGCATGTTTATGGGAAACAAGTCTTGAC AATAAAAATCTTGGTATTTTATTAGATTTGGCCAAGATTTACAAATTTTG CACATTTTGGCTGAATATTTGCGCGAACACGACTTTTTGGCCAGATCTTG GCTAGATCCAGCAAAATCTTGCTCCGAGGCCAACAGTCAAACCCAGAGTG TGCCAGATTGGACAGCTGATCTGTAGACGTCTGGAAGAGGGCTTCGAATG TTGTTGAGAGGCGAAAATCTGATTCCGAGCTCTTGGCGAGTAAACGTGGC CACAAAGGTCAAAATACACCAAGATTTTTATTTTCAACATTTTTTTCCCA TGAACATGGGCCATAGCACGAACGCATTGTGCGCGCTTTGTGCGTTTTAA GTAAATGTTCTACATTTTTTTTACTCATATAGGAGTATATATGATAGAAG CATCTGATGTTTCTACCATACGAAATGACAGCGATGATCAACGTCCGGCC TGCTGTATTTAGACGCCCTCCCGCCCTCGCACCCACGGCGCCCCAGCCCA GACTGCAAACAGCGGCACAAAAATTCCCTCCATCGGCACAACAGCAGTTA TATTTGGGTCGCCTGCTTTTTGTGAGGATTTGGGTTGTTAGTTAATGTGT GGGTGTATATATAGAAGTACACATGTGTATATATAATAGGGCAGCGGCCA AAACAAGGTACACTTTGTACTTTTACGGCCAAAACAAGGTGTCCTACTTT GGGTTCAAGTGAAAATTCCTACCAAGCACCTTCTTTTGGCCGAAAACGTA CACGGTACACCTTCGCGTGGCTACTCAACTTTCAGCTACACCTTGTTTTG CCGCTCGTTCACCCTCTTTTGGCCGGAAACCGCGGGGTTCTTCGTCGGGG ACCAGGGCCTTAGTGCCCTACTGACCCACGAGAAAAGTGTGGCCTTCCTG CTTACATTTTCTCATCATGCCGGATGACCCCCTAAACCAAATGCGCTACT TACCCTACCCCAATAATCCAACTGGATAGCCCCGCCGTCATACTAGTGTT GTACAAACGAGGGTCATTGCAGTCGTGTGTAGTTGCACGACGGAGCGTCT ACCCCATCCTCGAGCATGTAAATGTAGATAGTATGTAGACATTCATTGAC GCTGTGCACGGGTTGTGCCCCACTTTGATCGCGGCCATGGGACAGCCTCC GAGATTCTATCCGAGGGCTTTAGTATAGGTGCGAGGCACGTTGATGTTCG GTACCACGTATACCTTGTTTTGGCCGGAAAAGTACAAGGTGTACCTTGTT TTGGCCGTTGCCCTATAATATCTATTGTCAATACATTGTCAATACAATAC ACTACTTCTCACGTATCTTGGGACTCGCTTACATTTAGAGCGGTGGCGGA AGCCGCCGCCGAAAACCTTGTGTATATATATATATAAACCTATTAAGAAT TGAATTTTTCGTCAGAGGCCAGCATTTCACCGCCTCTCGGCCTCTGTGAG CGAGTATTCGGACTTTTCAGGCTCTGTGAGGCCACTATTTTTCGGGTCTG CACCCCCTTCTCCCTCCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CCTCCCCCCTTTTCTCCCCAACCCAACCCCCCCCTTTTTTTTCCCTCAAA ATCTAATTCGGTACATACATAGCCCTGGGAGTTCGCGTTGATCGGGTCCG CGGCGTTCTCTGCGGGAGTGACGCGGGCGGTGAGCACGGCCGTCATCGTG TTCGAGCTGTCCGGCGAGAACCACCTCCGCCTGCCGCTGGGCGTGGCTCT CATGATCTCGTACTTCATCGCGAACCGCTTCACCAAGGGCATCTACGACG CGCTCATGGACACCAACGGGACCCCTCACTTGGAAGAGGTGTGATATATA TGTGACTATATATATACTTGTAAATGTATACATATATGTTTTTTTTCCCT CCCATCGTTATTGGCATGTTTGTCGTCTGCCCCACTGGCCCCCTTCCTCC ACTTCGACTATTTGGCTAGACGACCCAACCGGGGTCACGCAGGAGGAGGG AGTTGGACTCCCTCCTGCCGTGCCTGCCTTACGGTGTTCGTGTATCTACA GCGGCAGTCCTGGAAAAGTTTCAGTGCCTGGGAAAGGGGTGCAGTATGCC TGGAAGAGGTACAGAGTAGTGTGCTTGGTTGCTCAGTTGCCTCGAACAGG CGCAGTGCACCTGTGAGAGGTACAGTACGCCTGGAAGAGGTGCAGTGTGC TTGATTGCATAGTACGCCTAGAACAGGTGCAGGTGTGCTTGAATGCACAG TACGCCTGGAAGAGGTGCAGTGTGCTTGAATGAACAGTACGCCTAGAACA GGTGCAGTGTGCTTGAATGCACAGTACGCCTGGAAGAGGTGCAGTGTGCT TGAATGCACAGTACGCCTAGAATAGGTGCAGTGTGCTTGAATGCACAGTA CGCCTAGAACAGGTGCAGTACACCTGTGAGAGGTACATTATGCCTGTTAG AGGTACACAGTCAATACGCCTGTGAGAGGTATATAGTCATTATGCCTGGA AAGAGATCCTTTTACAGAGATATTTTACAAGAGAGATACGGCAGTACGCC TCTGCGTGTTTTTTTTGTTTTTTTTACATGTCGCGAAAGAGAAAACGCCT CCCAGATGCTTCCGAAATACACACACGACGGGAGCCGCGCAAGCACCCCT CTGTTCTCCGCGGAGGTCTATTTATTAGCTGGAGAGAGACCGCACGGACG GCCGTTTTTCCAAGGATGTTAATAGACCATTCTCCAAGGATCGGTTCTGT AGGGCAACCACAAAGCCACACACCGGGGGTGATTGCCGCCGGTAGGCACC CTACAGACTTCTGTGGGCTTTGTGAGGCTTCCGGTACCCTGCCCTAATTG TTGGTGAGTTTTGTTAACCTACCAGTACCCCTACCGGGGGTGGGGTTAAC CCTGTGGTTTCTGCGACCCCTCACAATTAAAGACCCTGCCGGGGTGTTAC CCGTACCATACAAAACCGACCCTTTCGCCGTTCCGTGAGTTTTGTGACCC TACATACCAGTACCCTACCGGGGGTGGGGTTAACCCTGTGGTTTCTGCGA CCCCTCACAATTAAAGACCCTACCGGGGTGTTACCCGTACCCTACAGAAC CAACCCTTTTACTGTCCCGGTTTGTCGCTCTGGAGCTCAGGTGCCCCCCG AGGACAGGAATGTCCCGGCGGAAGACCTTATGGTTCCGGTGGAAGACGTC CCGTGTCTGTCGCTGGACTGCACCGGGAGACACGCCTCCGAGGTGGCCTC GCTGTGCCAGCCGGGACAGGTCATCCCCGTGGTGCAGTCTATGTGAGAGA GCGCCCGCCAGCATGGGTGGGTGGGTGGGTGGGTGGGCACTTATGGGTTA TTGTGTTTGTGTGTGTGTTTGTGTGTTTGTGTGTGTGTTCTTGTGTGTGT GTGTGTGTTTTTTTTTCTCAATTCCTAATTAGCACCGAGAGCGCGCTAAC CGGTTGCCCGATAAAAAGGCGTCCAAGCGTGTGTGTGTGTGTGTGTGTGT GTCTGGTGTCTGGTGTCTGGTGTGTGCGTGCATGTTTTTTTTGTCTTCCG GCGGGTGGCAGACTGGTAAGGGTTTTTGAGGGTGGGTTGGTGCCTCTCGC TTCGGTATTTATGGAGCCTCCCCCCCCCCCCGAAGCATGCACGCCGTGAC GATGTCACGTGTCTCACTCCTCGTCCTGCTGTGAGACACAGCGTTGACAA GTTTCGCCGAGACATTGCGGGGTGGGAACAGTGCGAGCGTACCGACTCGC GTCCATTCTCCCACATGTTAATTATGACGTCATGCTGTTGGTTATGACGT CACGACGGGCGGACGGTCATATTCCAGCCCACTTGATGCAAGATAAGGCG ATTGAGTGTCATTGGGGGGTCCCATAGTACCCTTTTCTCCGCCGTTCGAT GTGTTAGACCCATGTGTTAGACCCTACCTACCCACCTACCTACCTAAAAA CCCGTTGATTCTCGTATCTGGTGAGCTCGGTGACGGATTTATTTTCGAAG TGTGGAGTGGTGTGGTGTGGTGTGGATCGCCCAGAGTGCACCGAAGTCTC GCGTTGCGCCGCGCCCGTACGTTCGGCTTTGCGCACTCGCAAATCAGCGA GCCCCGTGGGAATCAGGACGGCTCTGCGTTTGCTACCTTGCAGCATGCAC GAGTTGCGTCCGCTACATACGTGTGTAGGCGGTTCCTCGACGCACGACCC GACCACTTTTTGTTTTTGTTTCGTGTCTCTTCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCAACAACCCCCNNNNNNNNNNTTTTT TTTTTTTGTCCCTTCCCCCCCCCCCCCCCCCCCACACACACACACACACA CAAAAAAAAAAAAGGACCGACAAAGTCTTGGTCGGGGTGGTCCTCTGGAA CGACCTCGCCATCGCCCTCGCCGACTACCGCCGGCGCGGCAGCAGCATCA TCGATATCACCGGCATCACCGGCACCGACGGCACCATCACTGCGGCCGCC GACAGCGCCGGCGCCCTCCTCCTCGCCTCCAAAGCCGCCGCAGCCGCGAC CGGCCTCCGGCGGCGGCGGCCGGCTGCTGCTGCTGCTGCTGCTGCTGCCG CCGGCGCCGGCTTGCTCGACACCGCGGCGGCCGCGGCGGCTTCGACCGGC GAAAGGTTCGAGTGGGAAGAGGCGTCGGACGGGGAGGCGGCGGGGGCTGG GGTTGGCGGGGGTGGGTTGTGGCCGGGGCTGGCCGACGTGGCGGAGGCGG TGGGGAAGCGGGTGGGGTGGTTTCCTCGGATGCGGACGGCGGAAGCTTCG TTGTTGCAGTGAGTGTCGATGCTGTTGACGTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTTCTTGGTATCTTGGCACT GCTGTGTATGGTTTGTTTTGTTGTCCGTTGTGGTCGTAGCGGTCATAGCT AGGGTCGGGGTCGGGGTTGTCGTTTTGCATCTATTTAGCGCTGGCCCCTT TAAGTGGGTTTACTCTCCCTCTTTTTTGCCGTAGAACAGCACGTTGACTC TTTTGTCAATTTGCGTGGTACACTCTACATGTCGCCCGGTCTACAGGGAG CTAGACAAACAGAGGGCGGAGGCAGTCGACGAACAACATAATCACACAGC AACCGGCGGCGGCGGCGGCGGTGGGCTCGACAGCGTCGATAACGTGCCGC TTTCGCCGCTCGGCGAGGGGATTCCCTGGGGTTCCTCCCCGTGGGGCGGC GGCGGCGGCGATGGCGGAGCGGCAGCGGCGGCGCTAGCGGCGGCGCTAGC GGGGCGGAAGGTCTTCCCCTCCTCCAACACAACCATACCGGACACGCAAG ACTCCCACCGACCTCTGCTCCACAGCTGGCGCAAGACCAGCCGCCGCAGC CGCCGGAGGTTCCCACCCCCGCAGAACAAGCCCCCCGAGCCCAGGGCAAT GCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGTCGCTTCCGTCGACACCAA TGGCGGCGGGCGACGCCCACCCCAAAAGGCGGCGGCGGCGTTGACGGCGA TCGAGAAGGCCAAGCAGGCGCCCCTCCGATTCTACCTCGTTCGAGAGGGG CACAAGTTTGTTGCGGTCGGGAGGCAGCGGACGAAGGGGGCGTGGAAGGA GCTCCCCGAGATGGTGGCGCCGGCGACCCGCGGGGACGGCATACCGATCG TGCTCGACCCGTCCCCCTATCAGGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTACGTGCGTGCGTGCGTGTGTTGGTGCGTGTGTTCGTGTGTGCATGCG TGTGTGCATGCGTGTGTTCGTGTGTGCATGCATGTGCGTGTGCGTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTCTAGCATCGTCCGCGCTTT CCGGTCGACTAATGAAGAGATGTCGGCCTCTAGCGGGCACAAGACGCAAA AAAATAAATCTCGTATGTAGGTGTTGGGACTGCTTGATGAGGGGTCCTCG GAAGCCTCTTAAGTATGTATGTGTGTGTGCGTGCGTGCGTGGGTACGCGT GTGTGCGTATTTTGGGTCGGCCGGGCTATCGGGCTGAACAACGAAGTGAC GCCAGCTTCAGCGGGCTACCTAAAGCCAAAAACCGCAAGAGAGGTTTCGG TTGGCAGCGATGCGCGGGCCCCTCTGAGGGGTGGTCACGGCGAAGGCTTG TAACAAACCTTTACACGACCTCTCATCGAAGCCTCCTCCCGAGACCCTCA GGTTACCCACACGACGGAGCTGTCCAAGGTCGACATCGCGTTCCGGCTGT TGAGGCTGGACAACGCGTACGTGTGCAACGCCGGTCGCCTGGTGGGGGTC ATCACCCGGGACAGCCTGGCCGACTTCGTGGACCAGCGTGAGGTCTCGCC CATGGACGACTGCTTGAGGTGCGGTGCGGCCGCGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9095:231..7567-

>mRNA_L-elsbetiae_contig9095.18123.1 ID=mRNA_L-elsbetiae_contig9095.18123.1|Name=mRNA_L-elsbetiae_contig9095.18123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3138bp|location=Sequence derived from alignment at L-elsbetiae_contig9095:231..7567- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTTGGCGGCTCATCCAGCTGCTGTTCCTAAAGTTCTGGACGACGAT
ATTCTCCGTGGTCCAGCCGCTGCCGATGTCTTGGCGGCTCATCCAGCTGC
TGTTCCTAAAGTTCTGGACGACGATATTCTCCGTGGTCCAGCCGCTGCCG
GTTGGGCTGTTCAGCCCTATCTTCGTGATTGGCGGGCTGATGGGGAGAAT
ATTCGGAGAAATGGCCCATTGGATGGACCGGTACGTGGACAGCGTCAACA
TCAACTTTCAGGTTGGGCTGTTCAGCCCTATCTTCGTGATTGGCGGGCTG
ATGGGGAGAATATTCGGAGAAATGGCCCATTGGATGGACCGGTACGTGGA
CAGCGTCAACATCAACTTTCAGCCCTGGGAGTTCGCGTTGATCGGGTCCG
CGGCGTTCTCTGCGGGAGTGACGCGGGCGGTGAGCACGGCCGTCATCGTG
TTCGAGCTGTCCGGCGAGAACCACCTCCGCCTGCCGCTGGGCGTGGCTCT
CATGATCTCGTACTTCATCGCGAACCGCTTCACCAAGGGCATCTACGACG
CGCTCATGGACACCAACGGGACCCCTCACTTGGAAGAGGTCCCTGGGAGT
TCGCGTTGATCGGGTCCGCGGCGTTCTCTGCGGGAGTGACGCGGGCGGTG
AGCACGGCCGTCATCGTGTTCGAGCTGTCCGGCGAGAACCACCTCCGCCT
GCCGCTGGGCGTGGCTCTCATGATCTCGTACTTCATCGCGAACCGCTTCA
CCAAGGGCATCTACGACGCGCTCATGGACACCAACGGGACCCCTCACTTG
GAAGAGGTGAATGTCCCGGCGGAAGACCTTATGGTTCCGGTGGAAGACGT
CCCGTGTCTGTCGCTGGACTGCACCGGGAGACACGCCTCCGAGGTGGCCT
CGCTGTGCCAGCCGGGACAGGTCATCCCCGTGGTGCAGTCTATGAATGTC
CCGGCGGAAGACCTTATGGTTCCGGTGGAAGACGTCCCGTGTCTGTCGCT
GGACTGCACCGGGAGACACGCCTCCGAGGTGGCCTCGCTGTGCCAGCCGG
GACAGGTCATCCCCGTGGTGCAGTCTATGACCGACAAAGTCTTGGTCGGG
GTGGTCCTCTGGAACGACCTCGCCATCGCCCTCGCCGACTACCGCCGGCG
CGGCAGCAGCATCATCGATATCACCGGCATCACCGGCACCGACGGCACCA
TCACTGCGGCCGCCGACAGCGCCGGCGCCCTCCTCCTCGCCTCCAAAGCC
GCCGCAGCCGCGACCGGCCTCCGGCGGCGGCGGCCGGCTGCTGCTGCTGC
TGCTGCTGCTGCCGCCGGCGCCGGCTTGCTCGACACCGCGGCGGCCGCGG
CGGCTTCGACCGGCGAAAGGTTCGAGTGGGAAGAGGCGTCGGACGGGGAG
GCGGCGGGGGCTGGGGTTGGCGGGGGTGGGTTGTGGCCGGGGCTGGCCGA
CGTGGCGGAGGCGGTGGGGAAGCGGGTGGGGTGGTTTCCTCGGATGCGGA
CGGCGGAAGCTTCGTTGTTGCAGACCGACAAAGTCTTGGTCGGGGTGGTC
CTCTGGAACGACCTCGCCATCGCCCTCGCCGACTACCGCCGGCGCGGCAG
CAGCATCATCGATATCACCGGCATCACCGGCACCGACGGCACCATCACTG
CGGCCGCCGACAGCGCCGGCGCCCTCCTCCTCGCCTCCAAAGCCGCCGCA
GCCGCGACCGGCCTCCGGCGGCGGCGGCCGGCTGCTGCTGCTGCTGCTGC
TGCTGCCGCCGGCGCCGGCTTGCTCGACACCGCGGCGGCCGCGGCGGCTT
CGACCGGCGAAAGGTTCGAGTGGGAAGAGGCGTCGGACGGGGAGGCGGCG
GGGGCTGGGGTTGGCGGGGGTGGGTTGTGGCCGGGGCTGGCCGACGTGGC
GGAGGCGGTGGGGAAGCGGGTGGGGTGGTTTCCTCGGATGCGGACGGCGG
AAGCTTCGTTGTTGCAGGCGGAGGCAGTCGACGAACAACATAATCACACA
GCAACCGGCGGCGGCGGCGGCGGTGGGCTCGACAGCGTCGATAACGTGCC
GCTTTCGCCGCTCGGCGAGGGGATTCCCTGGGGGCGGAGGCAGTCGACGA
ACAACATAATCACACAGCAACCGGCGGCGGCGGCGGCGGTGGGCTCGACA
GCGTCGATAACGTGCCGCTTTCGCCGCTCGGCGAGGGGATTCCCTGGGCC
CAGGGCAATGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGTCGCTTCCGT
CGACACCAATGGCGGCGGGCGACGCCCACCCCAAAAGGCGGCGGCGGCGT
TGACGGCGATCGAGAAGGCCAAGCAGGCGCCCCTCCGATTCTACCTCGTT
CGAGAGGGGCACAAGTTTGTTGCGGTCGGGAGGCAGCGGACGAAGGGGGC
GTGGAAGGAGCTCCCCGAGATGGTGGCGCCGGCGACCCGCGGGGACGGCA
TACCGATCGTGCTCGACCCGTCCCCCTATCAGCCCAGGGCAATGCCGCCG
CCGCCGCCGCCGCCGCCGCCGCTGTCGCTTCCGTCGACACCAATGGCGGC
GGGCGACGCCCACCCCAAAAGGCGGCGGCGGCGTTGACGGCGATCGAGAA
GGCCAAGCAGGCGCCCCTCCGATTCTACCTCGTTCGAGAGGGGCACAAGT
TTGTTGCGGTCGGGAGGCAGCGGACGAAGGGGGCGTGGAAGGAGCTCCCC
GAGATGGTGGCGCCGGCGACCCGCGGGGACGGCATACCGATCGTGCTCGA
CCCGTCCCCCTATCAGGTTACCCACACGACGGAGCTGTCCAAGGTCGACA
TCGCGTTCCGGCTGTTGAGGCTGGACAACGCGTACGTGTGCAACGCCGGT
CGCCTGGTGGGGGTCATCACCCGGGACAGCCTGGCCGACTTCGTGGACCA
GCGTGAGGTCTCGCCCATGGACGACTGCTTGAGGTGCGGTGCGGCCGCGT
GAGTTACCCACACGACGGAGCTGTCCAAGGTCGACATCGCGTTCCGGCTG
TTGAGGCTGGACAACGCGTACGTGTGCAACGCCGGTCGCCTGGTGGGGGT
CATCACCCGGGACAGCCTGGCCGACTTCGTGGACCAGCGTGAGGTCTCGC
CCATGGACGACTGCTTGAGGTGCGGTGCGGCCGCGTGA
back to top