mRNA_L-elsbetiae_contig9033.18063.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A6H5JSK3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSK3_9PHAE) HSP 1 Score: 246 bits (629), Expect = 1.700e-74 Identity = 137/189 (72.49%), Postives = 147/189 (77.78%), Query Frame = 2 Query: 35 PSCLGLERSHVLHTGSSNL--ANSRIRFTTAMAAAAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEVTDPADDLFIDDSPAASACAPP-----DDTPACSPPSTPASPC 580 PS G+ SSN A SR R +TAM AAR VTGEELEVE+TEWE PMILDVFATWCGPC+QLKPEIEKLSQALEGKCRVLKLDSDEEEDMAG LNIYGLPTV++MKDG+++HRTEGFL AEEMLQLADIHLFGK PPEVTDPADDLFID A AC PP D AC+PP PA C Sbjct: 38 PSPTGIRNLDASQRDSSNTNRATSR-RGSTAMQVAARLVTGEELEVELTEWELPMILDVFATWCGPCIQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGALNIYGLPTVIYMKDGKIQHRTEGFLPAEEMLQLADIHLFGKPPPEVTDPADDLFID----ADACKPPASAAGDAPSACTPP-PPADTC 220
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A835Z7J6_9STRA (Thioredoxin-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J6_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.090e-34 Identity = 62/123 (50.41%), Postives = 91/123 (73.98%), Query Frame = 2 Query: 131 AAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEVTDPADDLFID 499 A RE+TG E EVE+ + P++LD+FA WCGPCV L PE+EK ++ L G+ RVLK+DSD+E+ + L +YGLPT+L++KDG++ +RTEG + AE ++++A + L G PE DP+D LFI+ Sbjct: 62 AVREITGAEFEVELADTSSPILLDIFAVWCGPCVMLAPELEKAAEELGGQVRVLKIDSDKEDAITSALRVYGLPTLLYIKDGQIVYRTEGAMPAEAIVEVASVKLLGA--PEPDDPSDGLFIE 182
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S2V5P5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P5_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.320e-32 Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 134 AREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLF-GKAPPE 466 AR VTGEELEVE T+W+ PM+LD++ATWCGPC+ L PE++K++Q + RVLK+DS+ E +++G + GLPT++F++DGE++ R EG L EE++++ D HLF G P E Sbjct: 93 ARSVTGEELEVEFTDWDTPMVLDIYATWCGPCLILAPELDKVAQHFGDRLRVLKMDSEAEPEISGAFKVRGLPTIMFLQDGEIKARIEGALPGEELIKIVDYHLFDGPLPME 204
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S4HFL5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HFL5_9EUKA) HSP 1 Score: 119 bits (297), Expect = 1.490e-27 Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 137 REVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEVTD 475 R+VT E E E+ + P+++DV A WCGPC + P++E++++ LEGKCRVLK+DSDEE D+A TL I GLPT+L + D + R EG L A+E+ QL + H FG P + D Sbjct: 49 RQVTTAEFEEEIQDCSTPILVDVMAVWCGPCQLMAPQLEEVAKRLEGKCRVLKVDSDEEPDVANTLQIRGLPTILLINDMSIIMRAEGALMADELEQLVEHHAFGGPAPVIAD 161
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S4B483_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B483_CHRCT) HSP 1 Score: 117 bits (294), Expect = 6.180e-27 Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 2 Query: 2 VPNAARSSSLRPSCLGLERSHVLHTGSSNLANSRIRFTTAMAAAAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEV 469 V A +S R +G+ RS T LA R T R+V + E E+ + P+++D+FATWCGPC + P++EK ++ L +CRVLK+D+DEE ++A L I GLPTVL + D +V R EG L ++E+LQLA+ H F PPE+ Sbjct: 24 VEGAMLASVARGRAVGVARSAAACTPCQALAR---RATAPAMGLVRKVDTAQFEEEIQDCATPILVDIFATWCGPCQLMAPQLEKAAETLGDRCRVLKIDADEEPEVASALAIQGLPTVLLINDMKVVMRAEGALMSDEILQLAEHHFFNGPPPEI 176
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S3TU68_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TU68_EMIHU) HSP 1 Score: 115 bits (289), Expect = 1.860e-26 Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 131 AAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEV 469 A R+VT EE E E+ + P++LDVFA WCGPC + PE++K+++ +CRVLK+D+D+E ++A TL + GLPTVL + D V R EG L A+E+ ++ D H FG P + Sbjct: 49 AVRQVTTEEFEAELQDCATPILLDVFAVWCGPCQLMAPEMDKVAEHYGDRCRVLKIDADDEAEVADTLQVRGLPTVLLINDMSVVMRAEGALMADELKEIVDFHFFGGPKPSL 161
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S2MUL9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUL9_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.240e-26 Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 131 AAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGE------------VRHRTEGFLSAEEMLQLADIHLFGKAPPE 466 AA VTGEELE+ +TEW++P+++D +ATWCGPC+ + PE E +Q L+GK R KLD+D+ +MA LNI GLPT+LF+ E +++R EG L E +L L + H FG P+ Sbjct: 61 AASSVTGEELELMLTEWDEPLVVDAYATWCGPCLLMAPEFEAAAQELKGKVRFAKLDTDKHPEMAARLNIMGLPTLLFLDKFEGSDEEGPAAKAVLKNRIEGALRKESILALCEHHYFGGPRPD 184
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S3T121_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T121_9SPIT) HSP 1 Score: 115 bits (287), Expect = 4.750e-26 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 2 Query: 122 MAAAAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEVTDP 478 + AA R+VT E E E+ + P++LDVFA WCGPC + P++E++++ L K RVLK+D+DEE ++A TL I GLPTVL + D V R EG L A+E+L++ + H FG P+ +P Sbjct: 55 LMAAVRKVTTAEFEEELQDCSTPILLDVFAVWCGPCQLMAPQLEQVAEKLGDKVRVLKVDADEEPEVADTLMIRGLPTVLLINDMSVVMRAEGALMADELLEIVNYHFFGGPKPKSMEP 173
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A4D9CS93_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CS93_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.850e-25 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 2 Query: 143 VTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGEVRHRTEGFLSAEEMLQLADIHLFGKAPPEVTD 475 VTGEELE ++ E P++LDV+A WCGPC L E++K+ + K RVLK+DSDEE +A L +YGLPT+ F+++G++ HR EG + A E+ +L + + FG E+ D Sbjct: 62 VTGEELEKQLAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPRIASALKVYGLPTIFFIREGQLIHRVEGAMPASELTKLVNHYCFGAPEEEIKD 172
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Match: A0A7S0FMJ0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMJ0_9STRA) HSP 1 Score: 112 bits (281), Expect = 5.090e-25 Identity = 53/124 (42.74%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 131 AAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGTLNIYGLPTVLFMKDGE------------VRHRTEGFLSAEEMLQLADIHLFGKAPPE 466 AA V+G ELEV +T+W++P+++D +ATWCGPC+ + PE E ++ L+GK R +K+D+D+E++MA LNI GLPT+LF+ E ++ R EG + + +L L D H FG PE Sbjct: 70 AAPLVSGAELEVMLTDWDEPLVVDAYATWCGPCLLMAPEFEAAAKELKGKVRFVKIDTDQEQEMAARLNIMGLPTLLFLDKFEPEEGSTEEAKAVLKDRIEGAIRKDSILALCDHHFFGGPRPE 193 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9033.18063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9033.18063.1 >prot_L-elsbetiae_contig9033.18063.1 ID=prot_L-elsbetiae_contig9033.18063.1|Name=mRNA_L-elsbetiae_contig9033.18063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp MAAAAREVTGEELEVEMTEWEQPMILDVFATWCGPCVQLKPEIEKLSQALback to top mRNA from alignment at L-elsbetiae_contig9033:3967..7204+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9033.18063.1 ID=mRNA_L-elsbetiae_contig9033.18063.1|Name=mRNA_L-elsbetiae_contig9033.18063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3238bp|location=Sequence derived from alignment at L-elsbetiae_contig9033:3967..7204+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9033:3967..7204+ >mRNA_L-elsbetiae_contig9033.18063.1 ID=mRNA_L-elsbetiae_contig9033.18063.1|Name=mRNA_L-elsbetiae_contig9033.18063.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig9033:3967..7204+ (Laminarionema elsbetiae ELsaHSoW15)back to top |