mRNA_L-elsbetiae_contig9028.18051.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.250e-14 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 2 Query: 2 GPNWCLDAFIIALYQASDGRRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL*MG 184 GP+ CLDAF +AL QA DG WY ST++LQL+SL FC ACRS PT+H+KV++ TP RL G Sbjct: 26 GPSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSG 86
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 4.720e-11 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 20 DAFIIALYQASDG--RRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL 175 DAF IAL QA +G +RWY ST +LQL SL+ C ACRS PTLHV+V GTPT L Sbjct: 11 DAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSL 64
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 1.880e-10 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 2 Query: 14 CLDAFIIALYQASDGRRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL*MGAPA 193 CL+A I+AL + SDG+ WY STK+ QLASLEFC ACR+ TL +KV+ TP RL A A Sbjct: 12 CLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADA 71
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: D8LCS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS9_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 2.070e-10 Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 14 CLDAFIIALYQASDGRRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL*MG 184 CLDA I+AL A DG+ WY T +LQLASL+FC ACR+ PT+H+ V+ P RL G Sbjct: 85 CLDALIVALTNAGDGQGWYTPTTQLQLASLDFCTACRAVPTVHLTVDGDVPARLKAG 141
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5JSE5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSE5_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 3.820e-10 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 2 GPNWCLDAFIIALYQASDGRR--WYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL 175 G + CLDAFI+ + QA+DGR+ WYAST +LQL SL FC ACRSA LH+ V++G P L Sbjct: 971 GKSKCLDAFIVTMNQAADGRKQQWYASTLELQLVSLAFCGACRSAKMLHLHVDRGKPPSL 1030
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 3.980e-10 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 2 GPN--WCLDAFIIALYQASDGRRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL*MGAPA 193 GP +CL+A I+AL + DG+ WY STK+LQLASL+FC ACR+ T+H+ V++ P RL A A Sbjct: 45 GPTRKFCLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADA 110
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 4.140e-10 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 14 CLDAFIIALYQASDG--RRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL 175 CLDAF++AL Q +G +RWY ST +LQLASLEFC ACRS P LHV V+ TP L Sbjct: 9 CLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTL 64
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.030e-9 Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 2 Query: 2 GPNWCLDAFIIALYQASDGR--RWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL 175 G + CLDAFI+AL QA DGR RWY ST +LQL SLEFC ACRSA + V++ + TP L Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSL 84
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: A0A6H5JF56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF56_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.050e-9 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 2 GPNWCLDAFIIALYQASDGRRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL*MG 184 G N CLDAF++AL Q+ DG++WY S LQLASL FC ACR+ + V+KGTP RL G Sbjct: 32 GLNRCLDAFVVALNQSCDGKKWYTSIAGLQLASLAFCVACRNVLAPCLTVDKGTPLRLWCG 92
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 1.100e-9 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 14 CLDAFIIALYQASDGRRWYASTKKLQLASLEFCAACRSAPTLHVKVEKGTPTRL 175 CL+A +IAL + +G WY STK+LQLASLEFC ACR+ TLH+KV+ P RL Sbjct: 113 CLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRL 166 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9028.18051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9028.18051.1 >prot_L-elsbetiae_contig9028.18051.1 ID=prot_L-elsbetiae_contig9028.18051.1|Name=mRNA_L-elsbetiae_contig9028.18051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=354bp MVRVDKETPARVVGVLCRLSKRTHAARESGEGHAYPFVDGCPRSETRSAKback to top mRNA from alignment at L-elsbetiae_contig9028:5775..7486- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9028.18051.1 ID=mRNA_L-elsbetiae_contig9028.18051.1|Name=mRNA_L-elsbetiae_contig9028.18051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1712bp|location=Sequence derived from alignment at L-elsbetiae_contig9028:5775..7486- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9028:5775..7486- >mRNA_L-elsbetiae_contig9028.18051.1 ID=mRNA_L-elsbetiae_contig9028.18051.1|Name=mRNA_L-elsbetiae_contig9028.18051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2124bp|location=Sequence derived from alignment at L-elsbetiae_contig9028:5775..7486- (Laminarionema elsbetiae ELsaHSoW15)back to top |