mRNA_L-elsbetiae_contig902.18041.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 1.590e-12 Identity = 54/152 (35.53%), Postives = 71/152 (46.71%), Query Frame = 1 Query: 118 SRSGVACA--LYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRR----QSAESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 555 + +GVA A L D V VK F+D + V VVFDG PPAK GT+ RR RR Q A + A +KL FD R +++ + AR E AP E D Q V ++ Y++ NDSDL VLG ++L Sbjct: 247 TETGVAAANLLLNNDVSRQVEECAREVKLFEDRNFLVTVVFDGQPPPAKGGTSQHRRERREKSAQQARALHAAGGCPMEVNKLASAACAFDGRVTAEIATRLRARIGGEVYIAPGEADPQLVVFQDIHLATGPNVYVYANDSDLTVLGVRDL 398
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 7.220e-12 Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 127 GVACA--LYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 555 GVA A L D V +K F+D + V VVFDG PPAK+GT+ RR RRQ + + L +A + +KL FD R +++ + AR + E AP E D Q V ++ Y++ NDSDL VLG ++L Sbjct: 5 GVAAANLLLNNDVSRQVEECARDMKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDL 153
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 1.910e-10 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 190 VKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKN 552 +K F+D + V VVFDG PPAK+GT+ RR RRQ + + L +A + +KL FD R +++ + AR + E AP + D Q V ++ Y++ NDSDL VLG ++ Sbjct: 1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGKADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRD 125
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 8.820e-10 Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 1 Query: 190 VKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 555 +K F+D + V VVFDG PPAK+GT+ RR RRQ + + L +A + +KL FD R +++ + AR + E AP E D Q ++ Y++ NDSD VLG +L Sbjct: 1 MKLFEDRNFLVTVVFDGRPPPAKSGTSQHRRERRQKSAQQARALHDAGGCPVEINKLASAACAFDGRVTAEIATRLRARIRGEVNIAPGEADPQLAVFQDIHLATGANVYVYANDSDFTVLGVLDL 126
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A8H6EV38_DEKBR (Exonuclease 1 n=1 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A8H6EV38_DEKBR) HSP 1 Score: 66.2 bits (160), Expect = 2.020e-9 Identity = 62/195 (31.79%), Postives = 90/195 (46.15%), Query Frame = 1 Query: 1 MGVKDLLKALKEGASRQESFSRGDGL-LLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISA--RCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHG---NDSDLVVLGAKNLAWRI 567 MGV LL ALK S + G L ID LHK + + L TR ++ V+ + ++VFDG P+KAGT +ERR RRQ+ + R +A + + + M C T E I RC+++ + AP+E DSQ VYLE+ + G DSDL+V G + L ++ Sbjct: 1 MGVSGLLPALKS-IQTPISLEKYKGKRLAIDTYAWLHKGIFSCSLQLVL-GHPTRAYIDYVLRKVRMLRHFQIEPYLVFDGDHLPSKAGTEEERRKRRQTYKQRAIDALERHDRREAMGFCQKACDITPEMAKSLIEELKRCKIKYVVAPYEADSQMVYLEKS-------GLVDGIISEDSDLLVFGCQTLLTKM 186
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D8QEB2_SCHCM (Exonuclease 1 n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8QEB2_SCHCM) HSP 1 Score: 65.1 bits (157), Expect = 3.730e-9 Identity = 54/193 (27.98%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 1 MGVKDLLKALKEGASRQESFSRGDGLLLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRL----AEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNLAWRI 567 MG+ LL LK + ++ + +DG LH+ + V A +T ++ V+ + G ++VFDG PAK GT +ERR +R+ + +R A+ QA+D + +CV +V +A+ V+ + AP+E D+Q +LE I DSDL+V G KN+ +++ Sbjct: 1 MGITGLLPVLKSIQTTRKLSDFAGQTIAVDGYVWLHRGVYNCSVELAT-GKETHKYIDYFMHRVRMLRHNGVEPYIVFDGGPLPAKKGTENERRQKREESLARANMLAAQGKHSQARDHYL-KCVDVTPEMAYQVIKALRVE-NVKYVVAPYEADAQMAFLERTGAVHA----ILTEDSDLLVFGCKNVLFKL 186
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 4.190e-9 Identity = 49/156 (31.41%), Postives = 74/156 (47.44%), Query Frame = 1 Query: 100 MLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR---LAEATTQQAQ-DKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHGNDSDLVVLGAKNL 555 +L+K +SR G CA +K F+D + V VVFDG PP K+GT+ RR RR+ + + L +A + +KL F+ R +++ A + E AP E D Q V ++ Y++ NDSDL VLG ++L Sbjct: 12 LLNKDVSRQGEECARD--------------MKLFEDHNFLVTVVFDGRPPPVKSGTSQHRRERRKKSAQQARALHDAGGCPVEINKLASAACAFNGRVTAEIATRSRALIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDL 153
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A7D9CV32_DEKBR (Exonuclease 1 n=3 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A7D9CV32_DEKBR) HSP 1 Score: 65.1 bits (157), Expect = 5.680e-9 Identity = 62/195 (31.79%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 1 MGVKDLLKALKEGASRQESFSRGDGL-LLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRLAEATTQQAQDKLMVQCVHFDARTVEKVSRAISA--RCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHG---NDSDLVVLGAKNLAWRI 567 MGV LL ALK S + G L ID LHK + L TR ++ V+ + ++VFDG P+KAGT +ERR RRQ+ + R +A + + + M C T E I RC+++ + AP+E DSQ VYLE+ + G DSDL+V G + L ++ Sbjct: 1 MGVSGLLPALKS-IQTPISLEKYKGKRLAIDTYAWLHKGIFSCSPQLVL-GHPTRAYIDYVLRKVRMLRHFQIEPYLVFDGDHLPSKAGTEEERRKRRQTYKQRAIDALERHDRREAMGFCQKACDITPEMAKSLIEELKRCKIKYVVAPYEADSQMVYLEKS-------GLVDGIISEDSDLLVFGCQTLLTKM 186
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: W4JWC7_HETIT (Exonuclease 1 n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JWC7_HETIT) HSP 1 Score: 62.4 bits (150), Expect = 3.520e-8 Identity = 65/200 (32.50%), Postives = 93/200 (46.50%), Query Frame = 1 Query: 1 MGVKDLLKALKEGASRQESFSRGDG-LLLIDGGFMLHKSLSRSGVACA--LYAG-DTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESR----LAEATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQMGPRFHRCYIHG---NDSDLVVLGAKNLAWRI 567 MG+ LL LK Q+ S G L +DG LH R ACA L G TR V+ V+ + G ++VFDG PAK GT +ERR RR+ R A+ QA++ L +C+ + + +A+ A V + AP+E D+Q YLE + G DSDL+V G KN+ +++ Sbjct: 1 MGISGLLPLLKS-IHVQKHLSEFSGQTLAVDGYVWLH----RGAYACATELATGRSTRKYVDYAMQRVRLLRHYGIQPYLVFDGGPLPAKRGTENERRERREENLMRGNALAAQGRHAQARE-LYCKCLDVTPQMAYQFIKALRAE-NVPYIVAPYEADAQLAYLERT-------GVVDGIITEDSDLLVFGCKNVLFKL 186
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Match: A0A1E3QR87_9ASCO (Exonuclease 1 n=1 Tax=Babjeviella inositovora NRRL Y-12698 TaxID=984486 RepID=A0A1E3QR87_9ASCO) HSP 1 Score: 62.8 bits (151), Expect = 3.560e-8 Identity = 64/197 (32.49%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 1 MGVKDLLKALKEGASRQESFSRGDG-LLLIDGGFMLHKSLSRSGVACALYAGDTRGLVNATCDFVKAFQDAGWTVFVVFDGIAPPAKAGTNDERRSRRQSAESRLAE----ATTQQAQDKLMVQCVHFDARTVEKVSRAISARCQVETMSAPFEGDSQFVYLEEQ---MGPRFHRCYIHGNDSDLVVLGAKNLAWRI 567 MGV LL A+K + R G L +D LHKSL A T V V +D G T ++VFDG P KAGT ER +RR+ + A+ T++A K ++C V+ V + + R ++ + AP+E DSQ VYLE Q G I DSDL+V G + L ++ Sbjct: 1 MGVTGLLPAIKS-VQEPTTLQRYRGRTLAVDSYSWLHKSLMTCSFELA-QGMPTEKYVTYFMRRVTLLEDHGITPYLVFDGDHLPTKAGTERERAARREENRVKAADYARRGNTKEAY-KCYMKCADVTPAMVKSVIQVLKHR-GLQYVVAPYEADSQMVYLEAQGLVSG-------IVSEDSDLLVFGCRTLITKL 186 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig902.18041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig902.18041.1 >prot_L-elsbetiae_contig902.18041.1 ID=prot_L-elsbetiae_contig902.18041.1|Name=mRNA_L-elsbetiae_contig902.18041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp MGVKDLLKALKEGASRQESFSRGDGLLLIDGGFMLHKSLSRSGVACALYAback to top mRNA from alignment at L-elsbetiae_contig902:26979..27545+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig902.18041.1 ID=mRNA_L-elsbetiae_contig902.18041.1|Name=mRNA_L-elsbetiae_contig902.18041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=567bp|location=Sequence derived from alignment at L-elsbetiae_contig902:26979..27545+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig902:26979..27545+ >mRNA_L-elsbetiae_contig902.18041.1 ID=mRNA_L-elsbetiae_contig902.18041.1|Name=mRNA_L-elsbetiae_contig902.18041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1134bp|location=Sequence derived from alignment at L-elsbetiae_contig902:26979..27545+ (Laminarionema elsbetiae ELsaHSoW15)back to top |