mRNA_L-elsbetiae_contig90.18018.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig90.18018.1 vs. uniprot
Match: A0A6H5KV87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV87_9PHAE) HSP 1 Score: 381 bits (979), Expect = 8.210e-126 Identity = 195/258 (75.58%), Postives = 223/258 (86.43%), Query Frame = 2 Query: 140 TMAQPRTALAAMVTFLAGATYILWRRSRSNEQGEEEEWEPVDRDHVVKFFQAVNQLSHQNMASFNQQIAQYRGKVPEQHLIDLAVGHFEDQLAKSQAQVLNGMHIPLEDMEDSSKYYQAEGDPQVTQEMKLLKHLYLAVSNLPTDEEPVELPDDLTTEKMVTVVTAFFKASNNVIETVVQELLAKGENLAHPETAMKMSALIQEKSGPATDEAIKRFNLDSSTIGPAMEKFRDHPEIQNAMLVGSEEQREILRAYGLA 913 T AQPRTALA MV F AG YILWRR+ S E EEWEPVDR HVVKFFQ +NQ HQ++ SFNQQIAQYRGKVPEQ L DLAVGHFED LAK+QAQV GM I LEDMED+SKYY+ +GDPQV ++++ LKHLYL VSNLPTDEE ELPDDLT EKMVTVVTAFFKASNNV+E+VVQELLAKGE+++ PETAMKMS +IQE++GPATDEAIKRFNL+S+TIGPAMEKF++HPEI+ A++VGSEEQ +ILRAYGLA Sbjct: 131 TRAQPRTALATMVAFGAGVAYILWRRAGSMGDEEMEEWEPVDRSHVVKFFQILNQQLHQSIMSFNQQIAQYRGKVPEQQLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDPQVKEQLRHLKHLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVVESVVQELLAKGEDISSPETAMKMSMIIQERNGPATDEAIKRFNLNSTTIGPAMEKFQEHPEIKTAIMVGSEEQHQILRAYGLA 388
BLAST of mRNA_L-elsbetiae_contig90.18018.1 vs. uniprot
Match: D7FYT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT1_ECTSI) HSP 1 Score: 340 bits (871), Expect = 7.010e-112 Identity = 172/224 (76.79%), Postives = 197/224 (87.95%), Query Frame = 2 Query: 239 EEEEWEPVDRDHVVKFFQAVNQLSHQNMASFNQQIAQYRGKVPEQHLIDLAVGHFEDQLAKSQAQVLNGMHIPLEDMEDSSKYYQAEGDPQVTQEMKLLKHLYLAVSNLPTDEEPVELPDDLTTEKMVTVVTAFFKASNNVIETVVQELLAKGENLAHPETAMKMSALIQEKSGPATDEAIKRFNLDSSTIGPAMEKFRDHPEIQNAMLVGSEEQREILRAYGL 910 E EEWEPVDRDHVVKFFQ +NQ SHQ++ SFNQQI QYRGKVPEQHL DLAVGHFED LAK+QAQ+ GM I LEDMED+SKYY+ +GD QV ++++ LK+LYL VSNLPTDEE ELPDDLT EKMVTVVTAFFKASNNVIE+VVQELLAKG ++ +PETAMKMS IQEKSGPATDEAIKRFNL+S+TIGPAM+KFR+H EI+ A++VGSEEQ +ILR YGL Sbjct: 5 EMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIVQYRGKVPEQHLTDLAVGHFEDSLAKTQAQISVGMGISLEDMEDASKYYEEKGDQQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGGDVTNPETAMKMSMAIQEKSGPATDEAIKRFNLNSTTIGPAMDKFREHEEIKTAIMVGSEEQHQILRTYGL 228
BLAST of mRNA_L-elsbetiae_contig90.18018.1 vs. uniprot
Match: A0A6G0XZ15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XZ15_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.140e-6 Identity = 48/191 (25.13%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 335 QQIAQYRGKVPEQHLIDLAVGHFEDQLAKSQAQVLNGMHIPLEDMEDSSKYYQAEGDPQVTQEMKLLKHLYLAVSNLPTDEEPVELPDDLTTEKMVTVVTAFFKASNNVIETVVQELLAKGENLAHPETAMKMSALIQEKSGPATDEAIKRFNLDSSTIGPAMEKFRDHPEIQNAMLVGSEEQREILRAYG 907 Q+ AQ ++PE L +G FE+ + ++QV + + +D+ +S YY++ DP+V E++ L+ L+ ++ + + VE+P+DLT EK ++++ ++ N +E V QE+ K + E A+ + +K+ +++ + L + AM K++ P M Q E A G Sbjct: 95 QESAQSGRRLPEDQLAAYLMGQFEEAMKAIESQVYSKYNTTEQDVTVASDYYESIEDPEVHAELRKLRELHNLITGAGSLD--VEIPEDLTLEKFLSIMEETMESLNVAMEEVCQEV--KLLDPVDKEEAINQRYV--KKADQLSNDIHQHHGLSREVLQAAMMKYQQEPAFLTRMAELQRVQAERFAAAG 279 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig90.18018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig90.18018.1 >prot_L-elsbetiae_contig90.18018.1 ID=prot_L-elsbetiae_contig90.18018.1|Name=mRNA_L-elsbetiae_contig90.18018.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp MAQPRTALAAMVTFLAGATYILWRRSRSNEQGEEEEWEPVDRDHVVKFFQback to top mRNA from alignment at L-elsbetiae_contig90:55750..60088- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig90.18018.1 ID=mRNA_L-elsbetiae_contig90.18018.1|Name=mRNA_L-elsbetiae_contig90.18018.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4339bp|location=Sequence derived from alignment at L-elsbetiae_contig90:55750..60088- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig90:55750..60088- >mRNA_L-elsbetiae_contig90.18018.1 ID=mRNA_L-elsbetiae_contig90.18018.1|Name=mRNA_L-elsbetiae_contig90.18018.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1548bp|location=Sequence derived from alignment at L-elsbetiae_contig90:55750..60088- (Laminarionema elsbetiae ELsaHSoW15)back to top |