mRNA_L-elsbetiae_contig90.18010.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 288 bits (736), Expect = 1.780e-85 Identity = 138/157 (87.90%), Postives = 147/157 (93.63%), Query Frame = 2 Query: 1193 VKTTQSTHNMHR*EVAELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKVDPYDVDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 +K T++T + EVAELGAISFEKPGLVDHLRDGSQPRKF+VLLPALDCDG+PVAHKVDPYD DSDMLS +KQGR+GNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDD LHTVCQFGKVGEDRFHLDYRAPINAFQA CIS+AQFNF Sbjct: 438 LKRTEATVFTNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.730e-60 Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 2 Query: 1196 KTTQSTHNMHR*EVAELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKVDPYDVDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 K T +T + E ELGA+ FEKPGLVDH+ +GSQPRKF VLLP +D D P+ HKVDPYD M+ +K R G MFLLQ+++P + GNYRLNF GRVTVPSVKNFQLV+PDD + V QFGKVG+DRFHLD+RAP+NAFQAF I+L+QFNF Sbjct: 75 KKTDNTIYTNDQEKEELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 194 bits (494), Expect = 8.360e-55 Identity = 91/144 (63.19%), Postives = 110/144 (76.39%), Query Frame = 2 Query: 1232 EVAELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKVDPYDVDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 E E+GAI F KPG VD +++GSQPRK VLLP LD DG PV +K +P D+ +L ++ + G MF LQ+++P + KGNYRLNFHGRVTV SVKNFQL SPDD + VCQFGKV EDRFHLDYRAP+NAFQAF ++L QFNF Sbjct: 66 EREEMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFNF 209
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 190 bits (482), Expect = 1.440e-52 Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 2 Query: 1232 EVAELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKVDPYDVDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 E ELGAI+FEK G +D +++GSQPRK ++LP LD DG P+ +K + ++ +LS +K G+ G MF +S++P + KGNYRLNFHGRVTV SVKNFQLVSPDD + VCQFGKV EDRFHLDYRAP NAFQAF ++L QFNF Sbjct: 103 EKEELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFNF 246
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A812Y244_SYMMI (Tulp3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y244_SYMMI) HSP 1 Score: 177 bits (449), Expect = 4.870e-49 Identity = 82/141 (58.16%), Postives = 104/141 (73.76%), Query Frame = 2 Query: 1241 ELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKVD-PYDVDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFN 1660 E+ AI F++ GLV ++DG QPRK SVLLP LD + PV H+ + + V M+ +K+ MFLL S+EP Y GNYRLNFHGRV+VPSVKNFQL SPDD H +CQFGK+G+DRFHLDY+AP+NAFQAF ++L F+ Sbjct: 14 EVAAIVFDRVGLVSQIKDGCQPRKMSVLLPQLDAESHPVPHRTENKHGVKKSMVDMLKRDDTSRMFLLASKEPVYENGNYRLNFHGRVSVPSVKNFQLSSPDDPGHVICQFGKIGDDRFHLDYKAPLNAFQAFSLALCHFD 154
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 159 bits (402), Expect = 4.100e-41 Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 2 Query: 1241 ELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKV---DPY-----DVDSDMLS--CIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 E+GA+ F KP ++DH+RDG+QPRK V+LP D + P+ K DPY + SD L C + L+ +EP + GNYRLNFHGRVTVPSVKNFQLV P D +CQFGKV +DRFHLD++ P+N FQAFC++LAQFN+ Sbjct: 106 EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQ---------LERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.440e-39 Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 2 Query: 1241 ELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKV---DPY-----DVDSDMLS--CIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 E+GA+ F KP ++DH+RDG+QPRK V+LP D + P+ K DPY + SD L C + L+ +EP + GNYRLNFHGRVTVPSVKNFQLV P D +CQFGKV +DRFHLD++ P+N FQAFC++LAQFN+ Sbjct: 325 EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQ---------LERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.300e-36 Identity = 74/146 (50.68%), Postives = 99/146 (67.81%), Query Frame = 2 Query: 1241 ELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKV---DPYD--VDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 E+G + F KP ++DH+RDG+QPRK +++P ++ P+ V DPY + + I+QG + + +EP + GNYRLNF GRVTVPSVKNFQLVS DD CQFGKV +DRFHLD++ P+NAFQAFC+ LAQFN+ Sbjct: 287 EVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQG----CSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.600e-28 Identity = 70/146 (47.95%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 1232 EVAELGAISFEKPGLVDHLRDGSQPRKFSVLLPAL--DCDGAPVAHKVDPYDVDSDMLSCIKQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFNF 1663 E ELGAI+FE S+PRK +V+ P L D D V KVD + S ++ +K G+ ++ +L+++EP Y KG YRLNF+GRV+VPSVKNFQLV K + QFGKV + FHLD+R P+ FQAF I+L QFNF Sbjct: 213 EKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSF---SSLVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFNF 349
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 122 bits (306), Expect = 9.440e-28 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 1223 HR*EVAELGAISFEKPGLVDHLRDGSQPRKFSVLLPALDCDGAPVAHKVDPYDVDSDMLSCI-------KQGRYGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDKLHTVCQFGKVGEDRFHLDYRAPINAFQAFCISLAQFN 1660 H+ + EL +SFEK L++ L +G+QPRK +L+ D V P + S LS + K+ NM LL+++EP GNYRLNF GRV +PSVKNFQ+V + +CQFGKV ED FHLD++ P NA +AF ++L QFN Sbjct: 99 HKADKEELMGVSFEKMTLINQLTEGTQPRKMRILILRPDVVTG-TTEGVYPSNFGSPSLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig90.18010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig90.18010.1 >prot_L-elsbetiae_contig90.18010.1 ID=prot_L-elsbetiae_contig90.18010.1|Name=mRNA_L-elsbetiae_contig90.18010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp MLSYERGNTSDLVQCIIVRDRSGMNRLYPQYRFFFEGRREQLMMIAQKCSback to top mRNA from alignment at L-elsbetiae_contig90:229..3299+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig90.18010.1 ID=mRNA_L-elsbetiae_contig90.18010.1|Name=mRNA_L-elsbetiae_contig90.18010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3071bp|location=Sequence derived from alignment at L-elsbetiae_contig90:229..3299+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig90:229..3299+ >mRNA_L-elsbetiae_contig90.18010.1 ID=mRNA_L-elsbetiae_contig90.18010.1|Name=mRNA_L-elsbetiae_contig90.18010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig90:229..3299+ (Laminarionema elsbetiae ELsaHSoW15)back to top |