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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1519 |
| Cds size | 936 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816964.957176-UTR-L-elsbetiae_contig888:4992..5007 | 1622816964.957176-UTR-L-elsbetiae_contig888:4992..5007 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig888 4993..5007 + |
| 1691683946.5550416-UTR-L-elsbetiae_contig888:4992..5007 | 1691683946.5550416-UTR-L-elsbetiae_contig888:4992..5007 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig888 4993..5007 + |
| 1622816965.0076873-UTR-L-elsbetiae_contig888:6774..7342 | 1622816965.0076873-UTR-L-elsbetiae_contig888:6774..7342 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig888 6775..7342 + |
| 1691683946.6185687-UTR-L-elsbetiae_contig888:6774..7342 | 1691683946.6185687-UTR-L-elsbetiae_contig888:6774..7342 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig888 6775..7342 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816964.971529-CDS-L-elsbetiae_contig888:5007..5193 | 1622816964.971529-CDS-L-elsbetiae_contig888:5007..5193 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig888 5008..5193 + |
| 1691683946.5707443-CDS-L-elsbetiae_contig888:5007..5193 | 1691683946.5707443-CDS-L-elsbetiae_contig888:5007..5193 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig888 5008..5193 + |
| 1622816964.9860444-CDS-L-elsbetiae_contig888:5631..6291 | 1622816964.9860444-CDS-L-elsbetiae_contig888:5631..6291 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig888 5632..6291 + |
| 1691683946.5885625-CDS-L-elsbetiae_contig888:5631..6291 | 1691683946.5885625-CDS-L-elsbetiae_contig888:5631..6291 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig888 5632..6291 + |
| 1622816964.9980233-CDS-L-elsbetiae_contig888:6684..6774 | 1622816964.9980233-CDS-L-elsbetiae_contig888:6684..6774 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig888 6685..6774 + |
| 1691683946.607069-CDS-L-elsbetiae_contig888:6684..6774 | 1691683946.607069-CDS-L-elsbetiae_contig888:6684..6774 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig888 6685..6774 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig888.17903.1 >prot_L-elsbetiae_contig888.17903.1 ID=prot_L-elsbetiae_contig888.17903.1|Name=mRNA_L-elsbetiae_contig888.17903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MKAGVQGGMAPSSQQQFAGQGQNPGATMMGARGPTMAGAGQAPRGMVMNP
GGQQMAGQQVAMQPRPQIQQQQQQQQVRPQGQQQVRPQQFQQQQQPRPIP
TLQPRPAQQQQQARPMMQGGAQQGRGLQQQQQQPQTQMAMGGAGGGRGIP
QLTPMKAGMQGGMAPSSQQQFAGQGQNPGATMMGARGPTMAGAGQAARGM
VMNPGVQQMARGVQGVSAAGMQQQGMLQNGRPMMNTGPRPQQQQQQQQQR
MSFNNMQQGPSGGMARGQQQPGGGGQFTPQQQQQLWQQQQQQQLRQQQQQ
QQRQQGFNPRG* back to topmRNA from alignment at L-elsbetiae_contig888:4993..7342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig888.17903.1 ID=mRNA_L-elsbetiae_contig888.17903.1|Name=mRNA_L-elsbetiae_contig888.17903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2350bp|location=Sequence derived from alignment at L-elsbetiae_contig888:4993..7342+ (Laminarionema elsbetiae ELsaHSoW15)
CCGCAGCTAACGCCCATGAAGGCGGGTGTGCAGGGCGGGATGGCACCTTC
GTCCCAGCAGCAGTTTGCTGGCCAAGGCCAGAACCCGGGAGCGACCATGA
TGGGTGCTCGCGGTCCGACAATGGCGGGGGCTGGTCAGGCTCCGAGGGGG
ATGGTGATGAACCCTGGTGGACAGCAGATGGCGGGGCAGCAAGTGGCCAT
GGTGAGAAGTACGATGCTGTTTGCAGCCACGTTACCACAGAGGAGTATGG
TTTACTCCACTGACGTGCGAATCGCTGATGGTGGATGGTGGTTTGGTGTG
TCTAGTAGGAACTTCCGATGTGGGTCGTCATCGCTGCGCATCTTTGGAAA
ACGGCCGGCCGCTCGCATACAGCCGATAGATTGTGCGCTTTTCTGCCAGA
CCCGCTGGCGTCGTCGCCTACCGCTGCAGCTAGGCGCCTCGGCGAGTTGC
CGCTAACTTGCGTCGATGGAAATAGAAGGAGGGGGTCTCCTTTCCCAGTC
TTGTGTTCATTTTTTAATTATGTCCGATGTTTTTTTGTCTTGTGTCGCCC
CTGTCGTATGTGACGGTTCCTAACCCGCTCCGGTTCTTTCACGCACTTTC
ACCCCTCCCCCCCCGCGCGCCCCCCCCGCAACTCCACAGCAACCTCGCCC
CCAAATCCAGCAGCAGCAGCAGCAGCAGCAGGTGAGACCGCAGGGGCAAC
AGCAGGTGAGACCGCAGCAATTTCAGCAGCAACAGCAACCTCGCCCGATA
CCTACTCTACAGCCGAGGCCAGCTCAGCAACAGCAACAAGCGAGGCCAAT
GATGCAAGGAGGGGCACAGCAGGGGCGGGGCCTCCAGCAGCAGCAACAGC
AGCCGCAGACGCAGATGGCGATGGGCGGTGCCGGCGGCGGCCGAGGAATC
CCGCAGCTAACGCCCATGAAGGCGGGTATGCAGGGCGGGATGGCACCTTC
GTCCCAGCAGCAGTTTGCTGGCCAAGGCCAGAACCCGGGAGCAACCATGA
TGGGTGCTCGCGGTCCGACAATGGCGGGGGCTGGCCAGGCTGCGAGGGGG
ATGGTGATGAACCCTGGTGTCCAGCAGATGGCGAGGGGTGTTCAAGGGGT
GTCGGCAGCAGGCATGCAACAGCAGGGCATGCTGCAAAATGGACGCCCGA
TGATGAATACCGGCCCACGACCACAGCAGCAGCAGCAGCAGCAGCAGCAG
CGTATGTCTTTCAACAACATGCAGCAGGGCCCGAGCGGGGGTATGGCACG
TGGGCAACAGCAGCCCGGCGGGGGGGGGCAGTTCACGCCTCAGCAACAGG
TATCTACATGCGCCCATCGCGTCTCTTATTGCAGCACACATATACTCCGA
GTATGTATGTACAGAAAGAAAAATTCTGCACTCACTCCTGACAACTCCCC
GTGCAGCCCGATCCGGAGGGATAAAACATGGCGACTTGCAGCCGCACATT
GTAGGGTGATTATCCCCTTTTTGGTGTTCCCCCCCTTTTGGAGCTACCAC
ACATGCGACAGAGCGGAGAGGTTCGAGAACCGCTCTCACGTGCGGGTTAG
GCGTTGTTATTTTTTTCCAGGGCTGTTGCCACCAAACGTTTTTTTTCACC
CAGCGATGCGTACCGTCTTTCATCACAGCGCATTAATTCCCTCATGCACG
CACGTGTGCTCCGTTTGTTTCGGACTATTTTCGTGTGTACAGCAACAGCT
GTGGCAGCAGCAGCAGCAGCAGCAGCTACGGCAGCAGCAGCAACAGCAAC
AACGACAGCAGGGCTTCAACCCTAGAGGATAGCTAGCCATTTGAGGCTAG
CGGAAGGCTGGCACACAGTGCTAGAAAGGTCGCCGTGTAGGTGCACCTCT
TTTTTTGTATTTGTTCGAACCTGCGCCGTCGTCTTGTTGAGGAGTTTTGG
CGCAGCTGGCCGATGTTGCGGGGGCGGGAGGCTTTTTTGGTGCTGTTGTG
TCTTTGTTTCCTGCTCCCACCGCGGTACGGCACCATCCGTGACTCGAAAA
ACGTGCACGTGGTTGCCCGTACGACTGAAGACTCGAATCGCTTCTTGCTG
TGGTGGTGTTGGGTATTTGTTTGTGGGTGAGGTGCGACCTTCCTGCGAAG
GTCGGCTTTGTAGTATATCTATCTAGAGGTTGAGTATATGAGACGATTGG
GTTCGTTGGGTGCACTTGTCAAGTAGGAGGAAAGACCAGAGGCGGTACGG
TACGATACGATGTAATGCTCCGCTCTTCCAGTAGGAGGAGAGAGAAGACT
TTTTTTAAGAGTATTGATTCGCGTTATTTTTCAAGTTTACGTATGTATCC
AGAATCCCGGAAAGCGTGGATGCGTTTTCAGGAAGAACAACAATTCGTGA
back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig888:4993..7342+ >mRNA_L-elsbetiae_contig888.17903.1 ID=mRNA_L-elsbetiae_contig888.17903.1|Name=mRNA_L-elsbetiae_contig888.17903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig888:4993..7342+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGCGGGTGTGCAGGGCGGGATGGCACCTTCGTCCCAGCAGCAGTT
TGCTGGCCAAGGCCAGAACCCGGGAGCGACCATGATGGGTGCTCGCGGTC
CGACAATGGCGGGGGCTGGTCAGGCTCCGAGGGGGATGGTGATGAACCCT
GGTGGACAGCAGATGGCGGGGCAGCAAGTGGCCATGATGAAGGCGGGTGT
GCAGGGCGGGATGGCACCTTCGTCCCAGCAGCAGTTTGCTGGCCAAGGCC
AGAACCCGGGAGCGACCATGATGGGTGCTCGCGGTCCGACAATGGCGGGG
GCTGGTCAGGCTCCGAGGGGGATGGTGATGAACCCTGGTGGACAGCAGAT
GGCGGGGCAGCAAGTGGCCATGCAACCTCGCCCCCAAATCCAGCAGCAGC
AGCAGCAGCAGCAGGTGAGACCGCAGGGGCAACAGCAGGTGAGACCGCAG
CAATTTCAGCAGCAACAGCAACCTCGCCCGATACCTACTCTACAGCCGAG
GCCAGCTCAGCAACAGCAACAAGCGAGGCCAATGATGCAAGGAGGGGCAC
AGCAGGGGCGGGGCCTCCAGCAGCAGCAACAGCAGCCGCAGACGCAGATG
GCGATGGGCGGTGCCGGCGGCGGCCGAGGAATCCCGCAGCTAACGCCCAT
GAAGGCGGGTATGCAGGGCGGGATGGCACCTTCGTCCCAGCAGCAGTTTG
CTGGCCAAGGCCAGAACCCGGGAGCAACCATGATGGGTGCTCGCGGTCCG
ACAATGGCGGGGGCTGGCCAGGCTGCGAGGGGGATGGTGATGAACCCTGG
TGTCCAGCAGATGGCGAGGGGTGTTCAAGGGGTGTCGGCAGCAGGCATGC
AACAGCAGGGCATGCTGCAAAATGGACGCCCGATGATGAATACCGGCCCA
CGACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCGTATGTCTTTCAACAA
CATGCAGCAGGGCCCGAGCGGGGGTATGGCACGTGGGCAACAGCAGCCCG
GCGGGGGGGGGCAGTTCACGCCTCAGCAACAGCAACCTCGCCCCCAAATC
CAGCAGCAGCAGCAGCAGCAGCAGGTGAGACCGCAGGGGCAACAGCAGGT
GAGACCGCAGCAATTTCAGCAGCAACAGCAACCTCGCCCGATACCTACTC
TACAGCCGAGGCCAGCTCAGCAACAGCAACAAGCGAGGCCAATGATGCAA
GGAGGGGCACAGCAGGGGCGGGGCCTCCAGCAGCAGCAACAGCAGCCGCA
GACGCAGATGGCGATGGGCGGTGCCGGCGGCGGCCGAGGAATCCCGCAGC
TAACGCCCATGAAGGCGGGTATGCAGGGCGGGATGGCACCTTCGTCCCAG
CAGCAGTTTGCTGGCCAAGGCCAGAACCCGGGAGCAACCATGATGGGTGC
TCGCGGTCCGACAATGGCGGGGGCTGGCCAGGCTGCGAGGGGGATGGTGA
TGAACCCTGGTGTCCAGCAGATGGCGAGGGGTGTTCAAGGGGTGTCGGCA
GCAGGCATGCAACAGCAGGGCATGCTGCAAAATGGACGCCCGATGATGAA
TACCGGCCCACGACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCGTATGT
CTTTCAACAACATGCAGCAGGGCCCGAGCGGGGGTATGGCACGTGGGCAA
CAGCAGCCCGGCGGGGGGGGGCAGTTCACGCCTCAGCAACAGCAACAGCT
GTGGCAGCAGCAGCAGCAGCAGCAGCTACGGCAGCAGCAGCAACAGCAAC
AACGACAGCAGGGCTTCAACCCTAGAGGATAGCAACAGCTGTGGCAGCAG
CAGCAGCAGCAGCAGCTACGGCAGCAGCAGCAACAGCAACAACGACAGCA
GGGCTTCAACCCTAGAGGATAG back to top
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