mRNA_L-elsbetiae_contig8858.17876.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8858.17876.1
Unique NamemRNA_L-elsbetiae_contig8858.17876.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: D7G7Q5_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q5_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 5.030e-167
Identity = 236/282 (83.69%), Postives = 261/282 (92.55%), Query Frame = 1
Query:    1 RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
            +SGSHV LG+CELSVDTM+S+AG   G  N+S+GTG +V+ SCKLVPQPSFFDFLAGGLEMQFTV IDYTASNGDPNVADSLHYHD +GR  NQYAQSISSVGKILEHYD+DKRFPVLGFGGCP+PGAPA+HCFAVNGR+ D EVHG+ +ILDVY RESL+WVQLSGPTLFAP   Q A+VAASER+LDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVG+ADFSLMEQLDGDD+RIAN+QG+KASRDIVQFVPMR+F+N GFHALA+EV
Sbjct:  261 KSGSHVSLGSCELSVDTMVSRAGEPGGVLNISSGTGQLVIESCKLVPQPSFFDFLAGGLEMQFTVGIDYTASNGDPNVADSLHYHDSTGRTLNQYAQSISSVGKILEHYDSDKRFPVLGFGGCPIPGAPAIHCFAVNGREDDPEVHGVESILDVY-RESLKWVQLSGPTLFAPLINQVASVAASERTLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGRADFSLMEQLDGDDIRIANAQGRKASRDIVQFVPMREFSNLGFHALAREV 541          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 5.550e-117
Identity = 176/281 (62.63%), Postives = 218/281 (77.58%), Query Frame = 1
Query:    4 SGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
            SG+HV LG+C+ SV+ + SKA   S +  L  G G++ V SC L PQPSFFD++AGG+++ FTVAIDYTASNGDP+   SLHYHDP+G   N+Y Q+I SVG +LE++D D+RFPV GFGGCPV  APA HCFAVNG ++D EV GI  +LD+Y R+SL  VQLSGPTLFAP   Q A++AAS  S DP  Q Y +L+++TDGVI DM NT++A+VAAAD PFS++IVGVG AD++ MEQLDGDDVR+ N  G++A RDIVQFVPMRDFA K  HALAKEV
Sbjct:  263 SGNHVLLGSCKASVNDIKSKADSGSQNLMLDKGQGSITVSSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGSLHYHDPTGHTNNEYGQAIQSVGGVLEYFDDDRRFPVFGFGGCPVYRAPASHCFAVNGNENDPEVEGIAGVLDLY-RQSLTRVQLSGPTLFAPVISQAASLAASTMSKDPSQQYYTILLLITDGVICDMENTVEAIVAAADYPFSMVIVGVGDADYTSMEQLDGDDVRLVNRAGQRAGRDIVQFVPMRDFAGKSSHALAKEV 542          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 4.990e-101
Identity = 160/283 (56.54%), Postives = 210/283 (74.20%), Query Frame = 1
Query:    4 SGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAP--AVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
            SG+HV LG+C+ SV+ + S A     +  L  G  A+ V SC + PQP+FF ++AGG+++ FTVAIDYT SNG P+  DSLHYHDP+GR  N+YAQ+I SVG +LE++D D+RFPV GFGG P   AP    HCFAVN  + DAEV GI  +L+ Y R+SL+ V+LS PTLFAP   + A++AAS  + DP  Q Y +L+++TDG I D+ NT++A+VA++D PFSV+IVGVG+AD++ M++LDGDDVR+ N  GK+A RDIVQFVPMRDFA K  HALAKEV
Sbjct:  267 SGNHVLLGSCKASVNDIKSMAETGLQNLMLDKGRRAITVRSCTITPQPTFFGYIAGGMQIGFTVAIDYTLSNGRPSQPDSLHYHDPTGRTDNEYAQAIQSVGGVLEYFDDDRRFPVYGFGGRPKK-APRQTSHCFAVNDNEKDAEVEGISGVLETY-RQSLKRVELSLPTLFAPVISKVASLAASTMTKDPSRQYYTILLLITDGAIMDVENTVEAIVASSDYPFSVVIVGVGEADYTSMKRLDGDDVRLVNKAGKRAGRDIVQFVPMRDFAGKSSHALAKEV 547          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A835ZIA4_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA4_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.650e-93
Identity = 154/285 (54.04%), Postives = 198/285 (69.47%), Query Frame = 1
Query:    1 RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGT--GAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEVS 840
            + G+H  +GAC  S++  L   G ++ +   SAG   G + V  C+   QPSFFD+L GG+E+QF  AIDYT+SNGDP    SLHY DPSG++ N+YA++IS +G ++E YDADK FPV+GFGG P    P  HCFAVNG +   E  G+  IL +Y  +SLR V+L GPTLFAP   Q A VA+S ++ DP + KY VL+I+TDG I DM NT+DA+V A+ LP S+IIVGVG ADF  ME LDGDD  + +S G +A RDIVQFVPMR  A++G HA+AKEVS
Sbjct:  215 QEGAHTLVGACSASIND-LQGLGSKTLALKSSAGEACGELAVLECRTFTQPSFFDYLGGGMELQFQCAIDYTSSNGDPATPGSLHYRDPSGKL-NEYARAISDIGSVIEFYDADKAFPVMGFGGKPHHSQPVQHCFAVNGNEAQPEAMGVQGILQMYY-DSLRTVELFGPTLFAPIIGQAAGVASSLQTDDPSHHKYSVLLILTDGQICDMQNTVDAIVGASHLPLSIIIVGVGNADFKSMEVLDGDDAALVSSSGVRAQRDIVQFVPMRQVASRGEHAIAKEVS 496          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 9.570e-90
Identity = 149/283 (52.65%), Postives = 194/283 (68.55%), Query Frame = 1
Query:    1 RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGA-PAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
            +SG+H  LG+C+ SV+ + S A     +  L  G  A+ V SC + PQP+FF ++AGG+++ FTVAIDYTASNGDP+   SLHYHDP+GR  N+YAQ+I SVG +LE++D D+RFPV GFGG P   +  A HCFAVN  + DAEV GI  +L+ Y R+SL+ VQLS PTLFAP   + A++AAS  + DP  Q Y +L+++TDG I D+ N                 VGVG+A+++ M+ LDGDDVR+ N  GK+A RDIVQFVPMRDFA K  HALAKEV
Sbjct:  229 KSGNHALLGSCKASVNDLKSMAETGLQNLMLDKGRRAITVRSCTVTPQPNFFGYIAGGMQIGFTVAIDYTASNGDPSRRGSLHYHDPTGRTNNEYAQAIQSVGGVLEYFDDDRRFPVYGFGGRPKKTSRQASHCFAVNDNEKDAEVEGIAGVLETY-RQSLKRVQLSAPTLFAPVISKVASLAASTMTKDPSQQYYTILLLITDGAIMDVEN-----------------VGVGKANYASMKLLDGDDVRLVNKAGKRAGRDIVQFVPMRDFAGKSSHALAKEV 493          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A835ZFM3_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM3_9STRA)

HSP 1 Score: 282 bits (721), Expect = 4.010e-88
Identity = 149/289 (51.56%), Postives = 202/289 (69.90%), Query Frame = 1
Query:    1 RSGSHVPLGACELSVDTMLSKAGGQSGSF------NLSAGTGAVVVH-SCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
            +SG H+ +G CELSV+ ++S+A  Q  ++         AG+ ++++  +C LVPQPSFFD++AGG  + F VAIDYTASNG  N   SLHY  PSG++  +YAQ+I  VG++L +YD+D+ +PV GFGGCP   A A HCFAV G + D  V GI  +L+ Y   SL+ ++L GPTLFAP   Q  A+AAS  +LDPE Q Y VL+++TDG+I DM N +D+LVAAA+ P SVIIVGVG+ +F+ M  LDGDD R+ +S+G+ A RDIVQFV M DF  +G+  LA+EV
Sbjct:  256 KSGRHILIGMCELSVNDIISRATSQEPAYLSRSQNGRGAGSDSMLIFDACTLVPQPSFFDYIAGGCSLNFVVAIDYTASNGPVNDPTSLHYQHPSGQLT-EYAQAIQGVGQVLAYYDSDQLYPVYGFGGCPPGEAVANHCFAVTGNEADPCVQGIAGVLEAYYA-SLQRIKLHGPTLFAPVIAQATALAAS--TLDPERQNYWVLLLLTDGLIYDMDNCIDSLVAAAEYPISVIIVGVGRENFAPMRTLDGDDQRLRSSRGQYAVRDIVQFVAMSDFVGRGYEELAREV 540          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.270e-78
Identity = 147/303 (48.51%), Postives = 187/303 (61.72%), Query Frame = 1
Query:    1 RSGSHVPLGACELSVDTMLS-----------------KAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANS-QGKKASRDIVQFVPMRDFANKGF---HALAKEV 837
            R+G H  +G C  S+  M                   K   +S S+  S   G +VV  C +  +PSF D++AGG E+ FT+AIDYTASNG P    SLHY DP+G V N YA+++S +G++LE YD DK+FPV+GFGG   P  PA H FAVN ++   EV G+  +L  Y  +SLR VQLSGPTLF     Q A +A S +  +   QKYHVL I+TDG+INDM  T+ A+V AAD P S++IVGVGQ DF+ M+ LDGD  R+ +   GK ASRD+VQFVP RDF   G    HALAK V
Sbjct:  264 RAGGHDFIGGCSASIADMQRWSTASDDASRGPALVNPKKEAKSASYKDS---GRLVVDLCTITERPSFLDYIAGGTEISFTMAIDYTASNGTPADPRSLHYVDPAGTVLNDYARAMSGIGRVLEFYDTDKKFPVIGFGGKLGPDLPANHAFAVNFQEDAPEVEGMAGVLQAYY-QSLRRVQLSGPTLFQAIINQAAQIANSTKHRNSVGQKYHVLCIMTDGIINDMDATVSAIVDAADAPLSIVIVGVGQGDFTAMDHLDGDRQRLTSPFTGKVASRDMVQFVPFRDFNGFGSAAQHALAKHV 562          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A176W2E8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W2E8_MARPO)

HSP 1 Score: 252 bits (643), Expect = 2.920e-76
Identity = 132/238 (55.46%), Postives = 167/238 (70.17%), Query Frame = 1
Query:  103 TGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAPQ-TAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKG 813
            TG + + SC + P  SF D++ GG E+ F VA+D+TASNG P   DSLHY DPSGR PN+Y QSI +VG++L+HYD+D+RFP  GFGG P+ G P  HCFA+NG    AEV G+  IL  YS ++LR V L+GPTLFAP    A + + + +  ENQKY VL+I+TDGVI D   T++ALV A++LP SV+I+GVG ADFS ME LD D  R+  S G+ A RDIVQFVPM D   KG
Sbjct:  317 TGMLRIKSCTISPYHSFLDYIVGGCEINFMVAVDFTASNGSPFQPDSLHYADPSGR-PNKYQQSILAVGEVLQHYDSDQRFPAWGFGGRPIDG-PVSHCFALNGNQQAAEVDGVSGILYAYS-QALRHVALAGPTLFAPVINMAASIASQFVSQENQKYFVLLIITDGVITDPQQTINALVHASNLPLSVLIIGVGGADFSEMETLDADKKRLQTSDGRAAHRDIVQFVPM-DKMEKG 550          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: D8T435_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T435_SELML)

HSP 1 Score: 240 bits (613), Expect = 5.920e-72
Identity = 135/276 (48.91%), Postives = 183/276 (66.30%), Query Frame = 1
Query:    4 SGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGT-----GAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP--QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANK 810
            +G H  +G+ ++S++ + + AGG   SF L   +     G + V  C++    SF D+L GG ++ F VA+D+TASNG+P+  DSLHY DPSG+ PN Y  +I SVG++L HYD DK F   GFGG P+  +P  HCF +NG  H AEV G+  IL  YS ++L+ V L+GPTLFAP    A+  ASE  +  E QKY VL+I+TDGVI D+  T++A+V AA LP S++IVGVG ADF+ ME LD D  ++ +S G+ A RDIVQFVP+RD  NK
Sbjct:  274 NGRHDLIGSTQVSLNELQASAGGTV-SFELKRPSDNQAGGKLHVEGCRISSGHSFLDYLRGGCQLSFMVAVDFTASNGNPHQQDSLHYLDPSGK-PNSYEIAIESVGEVLYHYDYDKLFAAWGFGGKPM-NSPVSHCFNLNG--HSAEVDGVDGILRAYS-QALKSVALAGPTLFAPVVNMASSIASEY-ISQEKQKYFVLLIITDGVITDLHQTINAIVNAASLPLSILIVGVGGADFTEMEVLDADKRKLQSSDGRLAERDIVQFVPLRDMGNK 542          
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A0L9TIR3_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TIR3_PHAAN)

HSP 1 Score: 241 bits (616), Expect = 6.770e-71
Identity = 138/299 (46.15%), Postives = 183/299 (61.20%), Query Frame = 1
Query:    4 SGSHVPLGACELSVDTMLSK-AGGQSGSFNLSAGTG----------AVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAPQTA-AVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDD-VRIANSQGKKASRDIVQFVPMRDF---ANKGFHALAKEVSGRWT 852
            +G H  +G  ++S+  +    + GQ G+  LSA  G           + V       Q SF D+LAGG E+ F VA+D+TASNG+P + DSLHY DPSGR PN Y ++IS VG++L++YD+DKRFP  GFG  P+ G P  HCF +NG  H  EV GI  I+  Y+   L  V L+GPTLF P  + A   + +S+    +KY VL+I+TDGV+ D+  T DALV A+DLP S++IVGVG ADF  ME LD D   R+ NS G+ ASRDIVQFVP RD    A K +  + +   G+W 
Sbjct:  335 NGKHDLMGKVQMSLMELEKLYSSGQGGNLYLSAAAGHNSHNKMLKGRLYVDKYAESVQYSFLDYLAGGFELNFMVAVDFTASNGNPRLPDSLHYIDPSGR-PNAYQRAISEVGEVLQYYDSDKRFPTWGFGARPIDG-PVSHCFNLNGSSHYCEVEGIQGIMKAYTSALLN-VSLAGPTLFGPVISNAARIASQSVANGGRKYFVLLIITDGVVTDLQETKDALVKASDLPLSILIVGVGGADFKEMEILDADKGERLENSSGRLASRDIVQFVPFRDVQRSARKQYRGVRQRPWGKWA 630          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q5_ECTSI5.030e-16783.69C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6H5LMQ8_9PHAE5.550e-11762.63C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6H5L3T5_9PHAE4.990e-10156.54C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835ZIA4_9STRA3.650e-9354.04Copine-domain-containing protein n=1 Tax=Tribonema... [more]
D7FXN1_ECTSI9.570e-9052.65Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A835ZFM3_9STRA4.010e-8851.56Copine-domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5KG47_9PHAE2.270e-7848.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A176W2E8_MARPO2.920e-7655.46Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
D8T435_SELML5.920e-7248.91Uncharacterized protein n=6 Tax=Selaginella moelle... [more]
A0A0L9TIR3_PHAAN6.770e-7146.15Uncharacterized protein n=1 Tax=Phaseolus angulari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8858contigL-elsbetiae_contig8858:3048..7795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue9.4e-134
Seed eggNOG ortholog2880.D7G7Q5
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0005488,GO:0005543,GO:0005544,GO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0008150,GO:0008289,GO:0008361,GO:0009266,GO:0009270,GO:0009415,GO:0009506,GO:0009628,GO:0009987,GO:0010035,GO:0010118,GO:0010941,GO:0016020,GO:0016043,GO:0030054,GO:0032535,GO:0042221,GO:0043167,GO:0043168,GO:0044464,GO:0045793,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0055044,GO:0060548,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066,GO:0090332,GO:1901700
EggNOG free text desc.negative regulation of response to water deprivation
EggNOG OGsKOG1327@1,KOG1327@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionC2 domain
Ec32 orthologEc-06_000760.1
Exons6
Model size855
Cds size855
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8858.17876.1prot_L-elsbetiae_contig8858.17876.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8858 3048..7795 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816963.0129144-CDS-L-elsbetiae_contig8858:3047..32281622816963.0129144-CDS-L-elsbetiae_contig8858:3047..3228Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 3048..3228 -
1691683945.1347194-CDS-L-elsbetiae_contig8858:3047..32281691683945.1347194-CDS-L-elsbetiae_contig8858:3047..3228Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 3048..3228 -
1622816963.0290902-CDS-L-elsbetiae_contig8858:3481..36361622816963.0290902-CDS-L-elsbetiae_contig8858:3481..3636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 3482..3636 -
1691683945.1603992-CDS-L-elsbetiae_contig8858:3481..36361691683945.1603992-CDS-L-elsbetiae_contig8858:3481..3636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 3482..3636 -
1622816963.0412965-CDS-L-elsbetiae_contig8858:4551..46031622816963.0412965-CDS-L-elsbetiae_contig8858:4551..4603Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 4552..4603 -
1691683945.1797905-CDS-L-elsbetiae_contig8858:4551..46031691683945.1797905-CDS-L-elsbetiae_contig8858:4551..4603Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 4552..4603 -
1622816963.054576-CDS-L-elsbetiae_contig8858:5730..59151622816963.054576-CDS-L-elsbetiae_contig8858:5730..5915Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 5731..5915 -
1691683945.1896603-CDS-L-elsbetiae_contig8858:5730..59151691683945.1896603-CDS-L-elsbetiae_contig8858:5730..5915Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 5731..5915 -
1622816963.0683517-CDS-L-elsbetiae_contig8858:6877..70101622816963.0683517-CDS-L-elsbetiae_contig8858:6877..7010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 6878..7010 -
1691683945.1995518-CDS-L-elsbetiae_contig8858:6877..70101691683945.1995518-CDS-L-elsbetiae_contig8858:6877..7010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 6878..7010 -
1622816963.0798903-CDS-L-elsbetiae_contig8858:7646..77951622816963.0798903-CDS-L-elsbetiae_contig8858:7646..7795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 7647..7795 -
1691683945.2116861-CDS-L-elsbetiae_contig8858:7646..77951691683945.2116861-CDS-L-elsbetiae_contig8858:7646..7795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8858 7647..7795 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8858.17876.1

>prot_L-elsbetiae_contig8858.17876.1 ID=prot_L-elsbetiae_contig8858.17876.1|Name=mRNA_L-elsbetiae_contig8858.17876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPS
FFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSIS
SVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGA
ILDVYSRESLRWVQLSGPTLFAPQTAAVAASERSLDPENQKYHVLMIVTD
GVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQ
GKKASRDIVQFVPMRDFANKGFHALAKEVSGRWT*
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mRNA from alignment at L-elsbetiae_contig8858:3048..7795-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8858.17876.1 ID=mRNA_L-elsbetiae_contig8858.17876.1|Name=mRNA_L-elsbetiae_contig8858.17876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4748bp|location=Sequence derived from alignment at L-elsbetiae_contig8858:3048..7795- (Laminarionema elsbetiae ELsaHSoW15)
AGGTCCGGCTCCCACGTGCCGCTGGGAGCGTGCGAGCTGAGCGTCGACAC GATGCTGTCCAAGGCCGGCGGGCAAAGCGGCTCGTTCAACCTTTCCGCCG GGACGGGGGCGGTGGTGGTGCACAGCTGCAAGCTCGTGCCTCAGCCCAGG TGATAAAAACAAACAGCACTGCCCCGCGTGAGGCGGCGTGTTGTGTTTGT TTTGTTTTGTTTTGTTGTGTTTTTGTTTGTTGTTGGTCTGGTGGTCTATC GTATTTTATCGCGTATGTATGTATGTATCATCATGTTTAGTGTGGGTGGG CTCTTTCTCTCTCCTGTCTCTCTTGGTGAGGCAGTCTCTTCCGCTGCCTG CCTCTCTTGGTCTCTCGTTCGAATACATAGTCTCTTTTTTCTTCTTCTTG GCCTTTGCTGATATGTGTGGTACGGCTAGATAGGCTCGCGTTTCGTGAAG GGCCGATGAATTGCATGTAGGAAACCATTGCGAAACGTGCCGTAGCATGA AACAGCAGTTGACCCCCCCCCCGTTTTTAGTGTTCTGCCCGCAGGGATGT CGAGCGCCACCAGCACAGCAGCGGCTGCGGCCACAGCGTGTGAAGTAAAC AGCAGTAGTTAGTAGTTTCAGACCCCATCAAGAGGTTGATTCAATTGATT CCATGGCACTGCTCCTAACATAGGTGCGTTTTATGTCGTGCCCATTCCAC CCCGCTCCCTCTGCCCGGATTGACTGCTACCATCCTCGCGGCGGTGGCAA TACACACACACACACACGCACGCACGCACACACAGCTTCTTCGACTTTTT AGCCGGCGGCTTGGAGATGCAGTTCACGGTCGCGATCGACTACACAGCTT CGAACGGGGATCCCAACGTTGCCGACTCTCTTCACTACCACGACCCCTCC GGCCGTGTCCCCAACCAGGTTTGTGTTGAATCACCCAAGGTTTTGTGTCT ACTCGGCTGGCTCGTCGAGTGGGTTTCGACGCGTGGATGCGTGCGCGCTT GGGGGGGGGGGGGTATGGAGGCTGCCCGTCGGCACGTGGTAATTCGTCAG GAGTTGCGCCTGCGTTATTGCTAGCGCTTGCGCTTGCGCTTGCGCTTGTT GAGAGATACCAAGCGGTAAAGTTTCGCGTGAGGAATAAACGCCTCCCTGA GTGAAACCGAGATCGTTTTGCCGGTTCGTGGGGGCATCGCATGCCTAGTT AAAGTTAACCAAGAGTTCAGCTGAGTGCAGTTCGTTCACGGAAGAGTTGG GGAATGGTAAATCTGTATTGTTGGGTTTAGTGCTTAAAAAGTGCGAGCCG CTATGAAGTGGTGACGCTGTGTTGTCAGTGGCCGCCCTTTTGCGATATTT TGGGCTCTTGACGCTTGGGTTTCATCGCGTACATACCGTCTCGCCTATAC TACCCTATATTTACACTAAACAGACACAGTAGGGTCCAAGGCACCGACGG CCGTAATCGCGGCGAACCGCTGTACAGCAGTGGCCGACTCGTCTCTCACT CCATCTCCTCTCTCCTCATCTCACATCATTTTTCTCTCCTTTCCTCTCTC CATCCCCACACAGACGCACTTGCTTTTAATTACTCACACCCGACATGCAG AGCCGTGCATATTTTTATCTTGTCTCACGATCACACTCACACAGCCATCG GGGGCTGCCGCCCTCCCGTCGTGACTCCAAGTGACCCACCTGATTGGTAA AAAAAAACTGCGGCGGAATTTTTGAAACAGGCAAGGCCGAAGATCCTTTG ACGACGGGTGGTGTCACCCACGCTCGCTCGGTGTGTAGCCACGAAGTGAG CTATGTACCATGGCCAGGCACCAACCCTCCCTGATCCGGCCTTCCGTCCT CCCCCCTCCCCTCCCCCCTCCTCTCCGCAGTACGCGCAATCTATCTCCAG CGTGGGGAAAATCCTGGAGCACTACGACGCCGACAAGCGTTTCCCGGTGC TGGGGTTCGGCGGTTGCCCTGTCCCCGGGGCACCGGCGGTGCACTGCTTC GCCGTTAACGGAAGGGACCACGACGCAGAGGTGCATGGAATAGGGGCTAT CCTGGATGTGTATAGGTGAGGATTGCGCGCCCCCCCCCCCCCCCCCCCCC CCACCTACCCGCCAAGGCACAGGGCGTGCAGACACCAGCCCTGGTGAAAA AGAAAAACTTATATCTATGCACCAGGAGCTCGGTAGAGCGGCCTGGGGCT TAACCCGGCGCACCAACCTAGCCTGGGGTGTGGGTGTGGGTTAGGGTTAG GGTTGAGGTTGATCAGGCTGCGCGTTAGGCCTGCTGTAGCGCCGTGGTTC AGCCAGAGGGCCGGAAACCTAGAAGTGTAGGCCTTCTTTCTCGCGTCTAC CTCCAACTGCAACATAGGTTTAGTATCCTGGTGCGTATGAGCTTTTGCAC CAGCGTGTGCTCGTGGACACGCGCGCTGCCCGCCAAGGGGGGTCCGCGCG TTATGTGGGCTACGGTGCCCCGTGTATACCTTCCCTATCGTGGGGGATGT GCGTATTTACACGCGGTGTGTGCATCAGGTATAGCTACAACTACGCAAGC ACGTCTGTCTGATGCTTCCGACCTTGTCTGAAAGAACGAGCTTGTGCGTC TACCGGTTGCTTGCTGATAATTCCGGGTCTGGTCCCCTCCGATGCAGCAG ACGTACGTACATACGTTCGTACGTGCGCCGCAAGCTTTTTCACGTGACAT TTAACGTGTGTTTTTCTTGCAGACAGTTACACAAATCACACCCTGTGGAA TTTTCCTGCTCGTGGGTTGTGGTTCCAACTATGAAGAGACCGTCGACACC GGTAATCCGGTATAGGAGATGTCGAACGAACGGTGCTAGACGGGGGGCCC TGATTTGAGTGCAATCGCCACGCCCCAGCGGCCGGCCTGCTTGGTGCGCT TGTCTCTGAAGTGTACTCGTGATGCGGCGACGTGTAGGATAGGACACCAG CTGCTGTTCCCCCTTATCGCATGCAGTCTTCTGTGGCGCTCCTCTCTCTC TCTGAGGCGCCTTTGCGAGAGCCACTACGTTGCAGGCACAGCCAGTTTCA CGTCCCACCCACTCGTCTTTTTCGCGCTGTGCTCACTGCTAATTTGCAGC TATTGTTTTTACGCTGTACTACTGTTGTGGTTTTGGCTTTTTGGCTAATT ATTGTCATTTTTATTGCTTTGTTTTTTCGCGATCGACACGAGCAGGGAGA GCTTGAGGTGGGTACAGCTTTCTGGCCCGACGCTGTTTGCTCCCGTCATC AATCAGGCGAGTTGAGTCTTTAGACGACTCGGGGCTGGTTTTTAGGGTGC ATACGTAGATAGCTTGGACCGATGTTTTTGGTTCCGTTGGCACAGCTCAG TCTATTGAGCTGTCGACGACTTAGACTGGTTTAGACTACATACTTCTGTA GCGGGGATCGGGTGTGTTTGGTTGTCCGTTATGGCACAGCTTAGTTTTTT TTTTGGCACACGGGGGGCTTGTACCTGCACACGGTCTGCACCTACTGCTG TACCTGCACACGGCCTCCGCCTGCACACGGCCTGCGCTTGCACACAACCG AAAAAATCACGAGACGAAAACGACAAATCAACGTTGTTGGACCAAGCACC AAAAACCGCGGCTCGTCGTCGTGTATCTACGTGTGTGTGTCGTTTACTTT CCGGGCACGGGCACTGGCACTGGCACGTCTGCGGTGGCGCCGTCAGGAAC AAATAATAGCAAATACGCTGGTAAACGTGCGGGTATTCGTAAGAAAAAAA AGAAAACAAAATACGCGCGCACGCTCGTAGACGTATTCCTGCGCGTTGTG GCAGGCAGCTCCGGGGCAACCAATCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCACACACCAACCCCCACCCCCCGGCCAACAAAACAAAACA CAACTTTTCCCCNNNNNNNNNNACAAAACACCCGCCCACCCTCGTAGACG TATTCCCGCGCGTTTGGGCAGGCACCCCCGGGGCAACCAACCCCCCCCCC CCCCCCCCGGGCAAAACCTTTCAGCAACGAAACAGACCACCATGTGCAGT TCAATAAAACCAACGTCGTTTTGACCACGCGTTGCTTGCTTGCCCCGCGG ATTGCGGTCCTGTGCTGCTGCAACTCGTCTTGTTCTTAAAAATCAACGAC AAACAACAGCAGACGGCGGCGGTGGCGGCGTCGGAGCGGAGTCTGGACCC AGAAAACCAGAAGTACCACGTCTTGATGATCGTCACGGACGGGGTGATCA ACGACATGGGCAACACCATGGACGCCCTGGTGGCCGCGGCCGACCTGCCC TTCAGCGTTATCATGTGAGTTCCGCTTTTCTTCTCGGTCGAACACAGATA TAGTATATACTCCTATGTGCTGTTTGTTGTAGGGTGGCCGCGACACCGGC CGGCTGCGGTGCCCATGTATATTGCCTGCTGTCCGCTGTCTAATGTATAT TGTCTGCAGTGCCTAGTGTATGTGTCGCCTGTTGCCTGCGGTCTAATGTA TAGCGCCTGTTTGTCTTAAGTCTGCTGTCTGCCGCTGTCTACTGCTGTCT ACCGCTGTCTACAACAGTGTGGGGGTGGGCCAGGCAGATTTCTCTCTGAT GGAGCAGCTGGACGGAGATGACGTGCGGATCGCCAACTCGCAGGGGAAGA AGGCGTCGAGGGACATCGTGCAGTTCGTGCCCATGCGAGACTTCGCCAAC AAGGGCTTCCATGCGCTCGCGAAAGAGGTGAGCGGGCGCTGGACCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8858:3048..7795-

>mRNA_L-elsbetiae_contig8858.17876.1 ID=mRNA_L-elsbetiae_contig8858.17876.1|Name=mRNA_L-elsbetiae_contig8858.17876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1710bp|location=Sequence derived from alignment at L-elsbetiae_contig8858:3048..7795- (Laminarionema elsbetiae ELsaHSoW15)
AGGTCCGGCTCCCACGTGCCGCTGGGAGCGTGCGAGCTGAGCGTCGACAC
GATGCTGTCCAAGGCCGGCGGGCAAAGCGGCTCGTTCAACCTTTCCGCCG
GGACGGGGGCGGTGGTGGTGCACAGCTGCAAGCTCGTGCCTCAGCCCAGA
GGTCCGGCTCCCACGTGCCGCTGGGAGCGTGCGAGCTGAGCGTCGACACG
ATGCTGTCCAAGGCCGGCGGGCAAAGCGGCTCGTTCAACCTTTCCGCCGG
GACGGGGGCGGTGGTGGTGCACAGCTGCAAGCTCGTGCCTCAGCCCAGCT
TCTTCGACTTTTTAGCCGGCGGCTTGGAGATGCAGTTCACGGTCGCGATC
GACTACACAGCTTCGAACGGGGATCCCAACGTTGCCGACTCTCTTCACTA
CCACGACCCCTCCGGCCGTGTCCCCAACCAGCTTCTTCGACTTTTTAGCC
GGCGGCTTGGAGATGCAGTTCACGGTCGCGATCGACTACACAGCTTCGAA
CGGGGATCCCAACGTTGCCGACTCTCTTCACTACCACGACCCCTCCGGCC
GTGTCCCCAACCAGTACGCGCAATCTATCTCCAGCGTGGGGAAAATCCTG
GAGCACTACGACGCCGACAAGCGTTTCCCGGTGCTGGGGTTCGGCGGTTG
CCCTGTCCCCGGGGCACCGGCGGTGCACTGCTTCGCCGTTAACGGAAGGG
ACCACGACGCAGAGGTGCATGGAATAGGGGCTATCCTGGATGTGTATAGT
ACGCGCAATCTATCTCCAGCGTGGGGAAAATCCTGGAGCACTACGACGCC
GACAAGCGTTTCCCGGTGCTGGGGTTCGGCGGTTGCCCTGTCCCCGGGGC
ACCGGCGGTGCACTGCTTCGCCGTTAACGGAAGGGACCACGACGCAGAGG
TGCATGGAATAGGGGCTATCCTGGATGTGTATAGCAGGGAGAGCTTGAGG
TGGGTACAGCTTTCTGGCCCGACGCTGTTTGCTCCCCAGGGAGAGCTTGA
GGTGGGTACAGCTTTCTGGCCCGACGCTGTTTGCTCCCCAGACGGCGGCG
GTGGCGGCGTCGGAGCGGAGTCTGGACCCAGAAAACCAGAAGTACCACGT
CTTGATGATCGTCACGGACGGGGTGATCAACGACATGGGCAACACCATGG
ACGCCCTGGTGGCCGCGGCCGACCTGCCCTTCAGCGTTATCATCAGACGG
CGGCGGTGGCGGCGTCGGAGCGGAGTCTGGACCCAGAAAACCAGAAGTAC
CACGTCTTGATGATCGTCACGGACGGGGTGATCAACGACATGGGCAACAC
CATGGACGCCCTGGTGGCCGCGGCCGACCTGCCCTTCAGCGTTATCATTG
TGGGGGTGGGCCAGGCAGATTTCTCTCTGATGGAGCAGCTGGACGGAGAT
GACGTGCGGATCGCCAACTCGCAGGGGAAGAAGGCGTCGAGGGACATCGT
GCAGTTCGTGCCCATGCGAGACTTCGCCAACAAGGGCTTCCATGCGCTCG
CGAAAGAGGTGAGCGGGCGCTGGACCTGATGTGGGGGTGGGCCAGGCAGA
TTTCTCTCTGATGGAGCAGCTGGACGGAGATGACGTGCGGATCGCCAACT
CGCAGGGGAAGAAGGCGTCGAGGGACATCGTGCAGTTCGTGCCCATGCGA
GACTTCGCCAACAAGGGCTTCCATGCGCTCGCGAAAGAGGTGAGCGGGCG
CTGGACCTGA
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