mRNA_L-elsbetiae_contig8846.17870.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI) HSP 1 Score: 822 bits (2122), Expect = 1.070e-281 Identity = 480/582 (82.47%), Postives = 504/582 (86.60%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEAT--ASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASRRAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVG-ARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGATIGETSLYVAGGGGEREK 1737
Q++AIRQALESRLTLIQGPPGTGKTKTACNLIL+AVRLR+SKGG RRDGKVMATAFSNVAADNLLEGAL+LG+RA+RIGRPAT+RP LWHATLDALVENHP+VVAAKGWVKEVSQS E+ A A PS+ XXXXXXXX QSASRRAYAVLEAAQ EAARQII+GADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQL+LVGDQNQLPPTVICPEAEDGGL TSLFSRL+HAGIKP+LL+RQYRMHPAISDFPS HFYDGQV+TGIRASDR P GFPWPAASGPVAFVRV+ESGGE+ GVG ARRGQLESRGG EAAVQGGSFASAALGTSYCN REAEAVAFALELLL EGDV+AEDVGIITPYSAQVRLLQDVVGT RRS XXXXXXXXXXXX XXXXXXXXX GG+ LPEIASVDGYQGREKEVIILSAVRSN GGRVGFL+DWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGA +GE SLYVAGGGGERE+
Sbjct: 255 QTRAIRQALESRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARRDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSTESSAASEARRPSTTRGSAGSKXXXXXXXXTPS---------QSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNRQYRMHPAISDFPSLHFYDGQVTTGIRASDRPTPAGFPWPAASGPVAFVRVSESGGESHAGVGGARRGQLESRGGTEAAVQGGSFASAALGTSYCNVREAEAVAFALELLLREGDVEAEDVGIITPYSAQVRLLQDVVGTSRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXGGRKRGGVGLPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASLYVAGGGGEREE 825
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE) HSP 1 Score: 524 bits (1350), Expect = 4.110e-169 Identity = 305/428 (71.26%), Postives = 327/428 (76.40%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAET--EATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASRRAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQ---------------------LPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGE-----AGGGVG-ARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQ 1197
+++AIRQAL SRLTLIQGPPGTGKTKTACNLIL+AVRLR+SKGG R DGKVMATAFSNVAADNLLEGAL+LG+RA+RIGRPAT+RP LWHATLDALVENHP+VVAAKGWVKEVSQSAE+ E+ A PS+ SS QSASRRAYAVLEAAQ EAARQII+GADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQL+LVGDQNQ LPPTVICPEAEDGGL TSLFSRL+HAGIKP+LL+R L P GFPWPAASGPVAFVRV+ESGGE + GVG A+RGQLESRGG EAAVQGGSFASAALGTSYCN REAEAVAFALELLL EGDV+
Sbjct: 240 KTRAIRQALGSRLTLIQGPPGTGKTKTACNLILSAVRLRQSKGGARWDGKVMATAFSNVAADNLLEGALELGLRALRIGRPATIRPTLWHATLDALVENHPDVVAAKGWVKEVSQSAESSAESEARRPSTSRGSAGSKPRN----------SSATTPSQSASRRAYAVLEAAQLEAARQIIKGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLVLVGDQNQNSTRPPLFPPLRPRFIGDGPQLPPTVICPEAEDGGLGTSLFSRLMHAGIKPILLNR------------------------------LIPAGFPWPAASGPVAFVRVSESGGEREKRESNAGVGGAKRGQLESRGGTEAAVQGGSFASAALGTSYCNLREAEAVAFALELLLREGDVE 627
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA) HSP 1 Score: 355 bits (911), Expect = 1.580e-101 Identity = 244/592 (41.22%), Postives = 309/592 (52.20%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRD-GKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASRRAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRA------IGG--------DQEGGFSS------IRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGI-RASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALG---TSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGA--TIGE 1695
Q +A+R AL +L+LIQGPPGTGKT+TAC+L+ AV+L G RRD GKV+A AFSNVAADNLLEG L+LG+ AVR+GR ATVRP L + TLDAL+ H V K ++ V S R Q+A R LE A+ AA I+ ADVVV +C+GA N+ + A +GG ++ FSS ++F TV+IDEA+QATE A LVP+ +GC+QL+LVGD QLPPT+ A GL SLF+RL AGI+P LL QYRMHP I+ FPS FY G + + A R P GFPWP + PVAFV V GG E F TSY NR+EA+ + L +L ++Q+ DVGI+TPYSAQV+ + ++ R EI SVD YQGREKE+I++SAVRSN G+VGFL DWRRLNVAITRA+RG+VV+GDP TL+ D HW A+L+W + G T+GE
Sbjct: 517 QERALRMALSRKLSLIQGPPGTGKTRTACHLVSIAVKL-----GQRRDAGKVLAVAFSNVAADNLLEGCLRLGLNAVRVGRAATVRPELRNHTLDALLMQHQSVTTFKKKLEAVR-----------------------------------GSTARDVQAAKRD----LEDAELMAAVSILGNADVVVSTCVGAANEVIINAASVTGGLGGXXXXXXXWEEPSSFSSASPLRAVKFPTVIIDEASQATEPATLVPLTQGCEQLVLVGDHYQLPPTIKSMRAARHGLGVSLFTRLAMAGIEPSLLTVQYRMHPFIAQFPSQRFYGGLLKSHPGNARKRPRPDGFPWPHPTLPVAFVAV---------------------GGDEEDTHMAPFYEQRTNGNQTSYMNRKEADVLMEVLGGVLRRRNIQSMDVGIVTPYSAQVKHVTELAQARLRHFNPGDL-----------------------------------------------------EIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGE 990
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A0G4HN17_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN17_9ALVE) HSP 1 Score: 356 bits (914), Expect = 3.560e-98 Identity = 247/602 (41.03%), Postives = 317/602 (52.66%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLI------LAAVRLR----------------KSKGGVRRD--------GKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSA-ETEATASPPSSXXXXXXXXXXXXXXXXXXXXXS---SRGRSPQSASRRAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAI---GGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGATIGE 1695
Q A+R AL RLTLIQGPPGTGKT+T+C ++ + RLR K K R K++A AFSNVAADN+LEG L++G++AVR+GR V P L++ T DALV HPEV AA ++EVS A E P +R + Q R A + A+ A +I+ ADVVV SC+GAG FV A+ G D E S I FSTV++DEA+Q TE AALVP++ G +Q+ILVGDQNQLPPTV ++ L SLF RL+ AG+KP +L RQYRMHP I+ FPSA FY G++ + +A DR APRG WP + PV V + LESR A +GG TSY N+REA + L LL+EG+++ ++G++ PY+AQVR L+ ++ +E GA A E+ SVDGYQGREKEV++ SAVRSN G VGFL DWRRLNVAITRARRG+VVVGDP TL D +W +F+Q+C RG + E
Sbjct: 1492 QDVAVRAALSRRLTLIQGPPGTGKTRTSCLILGTLAQMMRTARLRGHEPVNRFEKLFTIESKEKEQALRSIPPQPPKLEKILAAAFSNVAADNILEGLLKMGVKAVRVGRSNVVNPLLYNYTADALVRQHPEVKAAVRHLREVSDRARELRLFGMKPDEKGPLLPQGVARNETEELLTFKEKEFARKKKMQEHVRLAEEDVRVAEKRALWRIMASADVVVSSCMGAGKVDFVNALECPGWDPER--SPISFSTVLLDEASQVTEPAALVPLVTGAEQVILVGDQNQLPPTVTTESVKEKCLDVSLFVRLVLAGVKPFMLGRQYRMHPVIAAFPSAQFYGGKLESVPKAEDRPAPRGVLWPDRNAPVMMAAVTDE-----------TLHLESR----ADWKGGGDT-----TSYQNKREATVILQLLRSLLAEGEIKPTEIGVVAPYAAQVRHLRGLI---------------------------LEEFGAET--------------------------AAQIEVKSVDGYQGREKEVVLFSAVRSNAFGNVGFLRDWRRLNVAITRARRGLVVVGDPLTLGFDENWESFIQFCSDRGLLVDE 2018
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A6V8CBL4_9ARCH (AAA domain-containing protein n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A6V8CBL4_9ARCH) HSP 1 Score: 328 bits (841), Expect = 2.620e-97 Identity = 222/562 (39.50%), Postives = 291/562 (51.78%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSAS--RRAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRG 1680
QS+A+ AL RLTLIQGPPGTGKT TA +++ + G ++ATA SNVA DNLLEG L G+ AVRIG+P VR +L ATLDA +E+HP ++++ E AT S RG + + S RR LE + +++ A+VV + +G+G+ R +G S RF V++DEATQA+E +++VPI+RGC+ L+LVGD QLPPTVI A +GGL SLF RLI G+ +L QYRMHP+I +FP A FYDG++ G S+R P GF WP PVAFV V+ G A G+S NR +A A + LL+ GD++ DVG++TPY+AQVR++ D+ +G DEGG F+G E+ SVDGYQGREKEVI+ VRSN G +GFL+D RRLNVAITRARRG+V+VG P TL+RD WRA+L W E G
Sbjct: 26 QSEAVEAALNQRLTLIQGPPGTGKTHTAVHVLATMAAQGR--------GPILATAESNVAVDNLLEGLLDAGVNAVRIGQPVKVRASLREATLDARLEHHP-------LQEDLAALREEHATLKRGLSGLKG-----------------KERGMAHKDLSMQRREMQRLEQQMVDG---LLDDAEVVCATTVGSGH----RILG--------SRRFPIVLVDEATQASEPSSMVPIVRGCRHLVLVGDHRQLPPTVISDRAAEGGLGRSLFERLIDLGLSTHMLTTQYRMHPSIREFPGARFYDGRLEDGCDRSERPPPAGFLWPDWDRPVAFVPVD-----------------------------GEEELDAEGSSKANRDQAAATFSIVRDLLAAGDLEGHDVGVVTPYTAQVRMMTDLFD----------------------EGGGLDEGGRFHGL----------------------------EVRSVDGYQGREKEVIVFCTVRSNPRGEIGFLADRRRLNVAITRARRGLVMVGHPQTLRRDGTWRAWLDWAEELG 461
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A0G4FCG3_VITBC (SAP domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FCG3_VITBC) HSP 1 Score: 352 bits (903), Expect = 3.040e-97 Identity = 240/586 (40.96%), Postives = 313/586 (53.41%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSK------------------GGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSAS--RRAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQ-EGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGT--CRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGATI 1689
Q +A+R++L R+TLIQGPPGTGKT+T+C L+ + V L K+ G R KV+A AFSNVAADNLLEG +++G++AVR GR V PAL + T+DA+V+ HPE AA +E Q + A + +S+ + ++ R A ++ A+ A I+ ADVVV S I AG + + ++FSTV+IDEA+Q TE AA VP+++GC+QLILVGDQNQLP TV+ +A+ GL SLFSRL+ AG+ PV+L QYRMHPAI+ FPS FYD ++ + + +R P GFPWP PVAFV V E G ESR E GGS TS NR EA + L+ L+S GDV D+G++TPY+AQVR LQD + T R +A AL E+ SVDGYQGREKEVI+ SAVRSN G VGFL DWRRLNVA+TRARRG+VV GDP TL D H+ +++QWC+ G +
Sbjct: 653 QEEAVRRSLTQRVTLIQGPPGTGKTRTSCLLLGSIVALMKAARAQGIQPCGDLPAALSATGPPPRIEKVLAAAFSNVAADNLLEGLIKMGVKAVRSGRALVVNPALKNYTVDAMVDQHPEYRAALAHEREARQRRQQLYRAHQDDTSDEDKA---------------ASQAKLDEANRLLRLAEEDVKVAEQRAIYDIVTKADVVVTSAISAGQPGLTSTTQVPEWDTQRVPVKFSTVLIDEASQVTEPAASVPMVKGCEQLILVGDQNQLPATVVSDKAKAEGLNLSLFSRLVLAGVVPVMLAAQYRMHPAIAMFPSFEFYDDRLISIPKPEERPTPGGFPWPDDVKPVAFVSVMEP-----------AGYSESRP-DETTKWGGST------TSKYNREEALCLVKVLKELVSHGDVSYTDIGVVTPYAAQVRFLQDTLRTELGRDTA-------------------------------------------------------ALIEVKSVDGYQGREKEVILFSAVRSNPTGSVGFLRDWRRLNVAVTRARRGLVVFGDPRTLTADPHYDSYIQWCKHEGLVV 1150
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A075FMQ4_9EURY (Regulator of nonsense transcripts 1 (UPF1, RENT1) (Fragment) n=1 Tax=uncultured marine group II/III euryarchaeote AD1000_24_F05 TaxID=1457742 RepID=A0A075FMQ4_9EURY) HSP 1 Score: 327 bits (837), Expect = 2.370e-96 Identity = 218/562 (38.79%), Postives = 289/562 (51.42%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASR---RAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERR 1677
Q +A +A+ SRL+LIQGPPGTGKT TA ++ + + G ++ATA SNVA DNLLEG L LG++AVRIG+P VR L ATL A +E HP + V+E+ E+ P + +G+ A R + + A +T +++GA+V+ +CIG G+ + +FS ++IDEATQA E A VPI+R C++L+LVGD QLPPTVI AE GL SLF R+I G+ P +L QYRMHP I+++ SA +YD Q+ G+ A DR+AP GF WP + PVAFV ++ G E AV G S NR EA V ++ LLS GD++ D+G+++PYS QV+LL D+ GKG EG GG+ EI S+DGYQGREKEVI+LS VR+NH G VGFLSD RRLNVAITR RRG++VVG+ DTL+ D W +L W R
Sbjct: 53 QGEAFEKAMTSRLSLIQGPPGTGKTHTAVRILQGWAK--------QGTGPILATADSNVAVDNLLEGLLDLGVKAVRIGQPVKVRSHLRSATLRARIEEHP----LQEEVRELIGLQESLQRRLP------------------------TFKGKEKGLAHRDLKMGWKAIRALETSMNDDVLDGAEVICSTCIGVGHQILGQR------------KFSNILIDEATQAIEPATWVPIMRSCRRLVLVGDHRQLPPTVISRRAEQDGLRRSLFERMIDVGMIPTMLKTQYRMHPVIAEYSSARYYDNQLENGVSADDRIAPAGFLWPDWNAPVAFVPID--------------------GAEELAVDG---------KSRINRDEAGWVVKIVDQLLSAGDLEPSDIGVVSPYSGQVQLLTDLFD---------------------GKGILAGEG------------------------DEEAGGL---EIRSIDGYQGREKEVIVLSTVRANHDGEVGFLSDHRRLNVAITRPRRGLIVVGNADTLRHDGDWEGWLDWVRDR 489
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A3A5V778_9ARCH (AAA domain-containing protein n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A3A5V778_9ARCH) HSP 1 Score: 328 bits (841), Expect = 7.120e-95 Identity = 224/562 (39.86%), Postives = 294/562 (52.31%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASR---RAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERR 1677
Q AI A+E RLTLIQGPPGTGKT TA L+ A VR+ + G ++ATA SNVA DNLLEG L+L + AVRIGRP VR L +ATLDA +ENHP + +++E Q+ + T S S +G+ A R R + + + +++GA+V+ + IG G+ G++ RF V++DEATQA+E +ALVPI RGC+QL+LVGD QLPPTVI AEDGGL SLF RLI G++ +L QYRMHP I ++PSA FYDG++ G + R GF WP PVAFV ++ G E + S S N EA V + LL+ GD+ D+G+ITPY+ QVRLL D+ + GG+ DEGG + G EI SVDGYQGREKE+I+ SAVR+N G +GFL D RRLNVA+TRA+RG++V+G+ TL++D WRA+L W E R
Sbjct: 227 QRTAIEAAIEQRLTLIQGPPGTGKTHTAIRLLAAFVRMGR--------GPILATAESNVAVDNLLEGLLELNINAVRIGRPVKVREHLRNATLDAQIENHPLQEEIR-FIRE--QNDDLRRTLS-------------------------SLKGKEKGMAHRDVNRNFKEIRQLEGNMISAVLDGAEVICATTIGVGHSLL-----GER-------RFPVVLMDEATQASEPSALVPITRGCRQLVLVGDHKQLPPTVISKVAEDGGLGRSLFERLIECGLEAHMLTTQYRMHPTIREYPSARFYDGRLDDGCSSEQRPPAAGFLWPDWDHPVAFVPID---------------------GSEIVDEESSSKS--------NLDEAAKVLSIVNDLLAAGDLTPSDIGVITPYNGQVRLLVDLF------------------EQAGGR----DEGGPYEGL----------------------------EIKSVDGYQGREKEIIVFSAVRANDAGEIGFLKDRRRLNVALTRAKRGLIVLGNAKTLRQDSTWRAWLDWAEER 661
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A2E8B9V1_9EURY (AAA domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E8B9V1_9EURY) HSP 1 Score: 327 bits (838), Expect = 2.070e-94 Identity = 227/566 (40.11%), Postives = 286/566 (50.53%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHP---EVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASR---RAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRG 1680
Q+ A+ A+ RLT+IQGPPGTGKT TA + R + G ++ATA SNVA DNLLEG L G+RAVRIGRP VR L ATLDA +E+HP E+ + EV ++ +GR A R R + + E + ++E A+V+ + IG+G+ R + G RF V++DEATQA E ++L+PI +GC+QLILVGD QLPPTVI +AE GL SLF RLI GI+P LLD QYRMHP + +FPSA FYD +++ G AS R AP G WP P AF+ + G+E Q G S N EA + ++ LL GD+ A D+GIITPYS QVR L D+ + +EG F+G EI +VDGYQGREKE+II SAVRSN G VGFLSD RRLNVAITRARRG+VVVGDP TL+ D WR++L W E RG
Sbjct: 231 QNAAMEAAMSRRLTIIQGPPGTGKTHTAVATLAQLAREGR--------GPILATAESNVAVDNLLEGLLNTGVRAVRIGRPVKVRETLRAATLDAQLEDHPKQDEIAIIRDETDEVHRAL-------------------------------PKLKGREKGLAHRDIQRNKKEIRRLENEMIQSVLENAEVICSTNIGSGH----RMLDGR--------RFPIVLMDEATQAVEPSSLIPISKGCRQLILVGDHKQLPPTVISRKAEQEGLGRSLFERLIDVGIQPKLLDVQYRMHPVLREFPSARFYDNRLNDGCTASQRPAPAGLLWPDWDHPFAFIPLE---------------------GIEEEEQEGGSRS--------NPIEAARIYALVQGLLQPGDITATDIGIITPYSGQVRALSDIFDSNNG----------------------REEGRPFHGL----------------------------EINTVDGYQGREKEIIIFSAVRSNQHGEVGFLSDRRRLNVAITRARRGLVVVGDPQTLRYDMTWRSWLDWAEERG 666
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Match: A0A075GJU9_9EURY (Regulator of nonsense transcripts 1 (UPF1, RENT1) n=12 Tax=Archaea TaxID=2157 RepID=A0A075GJU9_9EURY) HSP 1 Score: 327 bits (837), Expect = 2.590e-94 Identity = 218/562 (38.79%), Postives = 289/562 (51.42%), Query Frame = 1
Query: 1 QSKAIRQALESRLTLIQGPPGTGKTKTACNLILAAVRLRKSKGGVRRDGKVMATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPEVVAAKGWVKEVSQSAETEATASPPSSXXXXXXXXXXXXXXXXXXXXXSSRGRSPQSASR---RAYAVLEAAQTEAARQIIEGADVVVCSCIGAGNDAFVRAIGGDQEGGFSSIRFSTVVIDEATQATEAAALVPIIRGCQQLILVGDQNQLPPTVICPEAEDGGLATSLFSRLIHAGIKPVLLDRQYRMHPAISDFPSAHFYDGQVSTGIRASDRLAPRGFPWPAASGPVAFVRVNESGGEAGGGVGARRGQLESRGGMEAAVQGGSFASAALGTSYCNRREAEAVAFALELLLSEGDVQAEDVGIITPYSAQVRLLQDVVGTCRRSAXXXXXXXXXXXXREGGKGPREDEGGAFYGRGGGSGAYGXXXXXXXXXXXXXXGGIALPEIASVDGYQGREKEVIILSAVRSNHGGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERR 1677
Q +A +A+ SRL+LIQGPPGTGKT TA ++ + + G ++ATA SNVA DNLLEG L LG++AVRIG+P VR L ATL A +E HP + V+E+ E+ P + +G+ A R + + A +T +++GA+V+ +CIG G+ + +FS ++IDEATQA E A VPI+R C++L+LVGD QLPPTVI AE GL SLF R+I G+ P +L QYRMHP I+++ SA +YD Q+ G+ A DR+AP GF WP + PVAFV ++ G E AV G S NR EA V ++ LLS GD++ D+G+++PYS QV+LL D+ GKG EG GG+ EI S+DGYQGREKEVI+LS VR+NH G VGFLSD RRLNVAITR RRG++VVG+ DTL+ D W +L W R
Sbjct: 224 QGEAFEKAMTSRLSLIQGPPGTGKTHTAVRILQGWAK--------QGTGPILATADSNVAVDNLLEGLLDLGVKAVRIGQPVKVRSHLRSATLRARIEEHP----LQEEVRELIGLQESLQRRLP------------------------TFKGKEKGLAHRDLKMGWKAIRALETSMNDDVLDGAEVICSTCIGVGHQILGQR------------KFSNILIDEATQAIEPATWVPIMRSCRRLVLVGDHRQLPPTVISRRAEQDGLRRSLFERMIDVGMIPTMLKTQYRMHPVIAEYSSARYYDNQLENGVSADDRIAPAGFLWPDWNAPVAFVPID--------------------GAEELAVDG---------KSRINRDEAGWVVKIVDQLLSAGDLEPSDIGVVSPYSGQVQLLTDLFD---------------------GKGILAGEG------------------------DEEAGGL---EIRSIDGYQGREKEVIVLSTVRANHDGEVGFLSDHRRLNVAITRPRRGLIVVGNADTLRHDGDWEGWLDWVRDR 660 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8846.17870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8846.17870.1 >prot_L-elsbetiae_contig8846.17870.1 ID=prot_L-elsbetiae_contig8846.17870.1|Name=mRNA_L-elsbetiae_contig8846.17870.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=565bp MATAFSNVAADNLLEGALQLGMRAVRIGRPATVRPALWHATLDALVENHPback to top mRNA from alignment at L-elsbetiae_contig8846:94..6876+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8846.17870.1 ID=mRNA_L-elsbetiae_contig8846.17870.1|Name=mRNA_L-elsbetiae_contig8846.17870.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6783bp|location=Sequence derived from alignment at L-elsbetiae_contig8846:94..6876+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8846:94..6876+ >mRNA_L-elsbetiae_contig8846.17870.1 ID=mRNA_L-elsbetiae_contig8846.17870.1|Name=mRNA_L-elsbetiae_contig8846.17870.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3390bp|location=Sequence derived from alignment at L-elsbetiae_contig8846:94..6876+ (Laminarionema elsbetiae ELsaHSoW15)back to top |