mRNA_L-elsbetiae_contig883.17859.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig883.17859.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI) HSP 1 Score: 275 bits (704), Expect = 9.450e-70 Identity = 1190/2964 (40.15%), Postives = 1300/2964 (43.86%), Query Frame = 1
Query: 1 ISGDLPSADVSVTAPDVKVEGGDASLTAGLAAGGVAALGAVGAAVGLSGDKPDAELPTADLPSGGVDASLNV--------EKPKKGLFSGIFKSSKTKIEVPDVDADASVSDVTVTVPTG----------------------------------EAD-----------------------------NLLARVGGVGACCPKLSTPVFSK*LAFQLFFDFSELVATRPFFFLLSGGDLPEVDTVSADLPSVEGGVEAPGIPSVDVVAPSASVDXXXXXLXGXXXXXXXVGGDISGXXXXXXXXXXXXXXXXXXXXASLTAGLAAGGVAALSAVGAAVGLSGDKPDAEVDASMPSASIDVXXXXXXXXXXSVGDVSADLGATVDDVKAPSLDKLKPKKGLFNFGLSFKK------SKTPKVSTAVLFPRRNVCSVSSACRDRLI-----------------------------TDVDADIPAPSVXXXXXXXXXXXXXXXXXXXXXXXDLAGKVPEV---------PSVGGISGXXXXXXXXXXXXXVKVEGD-----------------------------DASLTAGLAAGGVAALGAVDAVDAAVSLSGDKPDAEVRLADVGVSGTL---PSVDVDVEAPSVSVPDVSGXXXXXXXXXXEMAVXXXXXXXXXXXXXXXXVSGDVSAXXXXXXXXXXXXXXSL-----PDXXXXXXXXXXXXXSVD------------------------------------------------------ASMPSVGDVSA---------DVEAKVDDIAAKV--PDMPSVEVKKPKKGLFGGIFSGSKGKIEVPGIDAVVPDVSGEV---------------------------------------------SXXXXXXXXXXXXXXXXXXXXXASVXXXXXXXXXXXXXXXXXXXXXXXXXPSVDVVGKVPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISGDLPSADVSATAPDVKVEGGDASLTAGLAAGGVAALGAAGAAVGLSGDKPDAEFPSGDVDASLSAPDVPSVEVKKPKKSLFGGIFGSSKGKLEVPD-------VSGEXXXXXXXXXXXXXXX-------SGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------SVDVDAPSASXXXPSVDVAGKVPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDISGDXXXXXXXXXXXXVKVEGGDASLAAGLAAGGVAALGAVGAAVGLSGDKPDAEVPS--VDASLSAPEVPPVDVKKPKKSKFG---IKMPSILKGKSGKIDVSCSLLVATAAWHQSPVGCAPAPNVSSVPDVDASVDVPSVDVPSVSGDVSVPSASIEGDVPSXXXXXXXXXXXXXXXXXXXXXVDLAAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------DASLTAGLAAGGVAALGAVGAAVGLXXXXXXXXXXXXXXXXXXXXXXXXXXXGMFG-------SSKAKIEVPDVDAAVPDVSGEVSXXXXXXXXXXXXXXGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVDASAVSVDVXXXXXXXXXXXXXXXDVXM---PSTEGEIPAVDLADKATEMPSVEGDVSVDPPSADVSVTAPDVKVEGGKSSLTAGLAAGAVAAVGSIGAAVGLAADKPDAELPSADVDASLSAPDVPSAEVKKPKKSMLSTLSFKRPTL--KGKKPKVRLSSGVPDVDVAXXXXXXXXXXASGEVSVPAVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGASLTAGLAAGGVAALGAVGAAVGLXXXXXXXXXXXXXXXXXXXXP----------KKSRFGGMFGGSKAKIEVPEVDATLPEVSGXXXXXXXXXXXXXXXXXXXXGVEGALPSVD-----VPXXXXDLSMPEMPSVSGEVLSSVPGLSSVDVGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITAEGRLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE---------------------------GKMLDVPSVEGNITADVPSADVSVTAPDVTAEGGDASLTAGLAAGAVAAVAGIGAAVGLSGDKPDSEVPSVDA------------KKPKKSKFGIKMPSILKKGKSSSKVDVPDVDASXXXXXXXXXXXXXXXSASMPDASGALXXXXXXVDVPSADVAVDASVDVPSVSGDAC--LPSTSXXXXXXXXXXXXXXXXXXXXXVDAAVXXXXXXXXXXXXXXGDVAAEIGAKVDNV----------------------AAEAPEVPSVEVKKPKKGLFKGLSFKKGKGKIEVSVPDVXXXXXXXXXVSGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDGASLTAGHAAGGLAALGGVGAAVGLSADKPD 6660
+SG+LPS DVSVTAPDVKVEGGD SLTAGLAAGGVAA+GA+GAAVGLSGDKPDAELP+ D VDAS++V +KPKKGLF G+F SSK KIEVPD AD SV DV+ V AD +PSVD+ APS XXXXX XG V G + G SLTAGLAAGGVAA+ A+GAAVGLSGDKPDAE +PS GDV A + +V DV PS+D KPKKGLF GLSFKK +K P V A VDA + XXXXXXXXXXXXXXXXXXXXXXX PSV G XXXXXXXXXX D S G + + P EV+ G+ G++ ++V VSVPDVS XXXXXXXXXX XXXXXXXXXXXXXXXX XXXXXXXXXXXXXX PD XXXXXXX SVD + +VG + A D E D+ A V PD+PSV+V KPKKGLFGG+F SK KIEVP D VPDV+ S XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXX + G+LPS DVS TAPDVKVEGGD SLTAGLAAGGVAA+GA GAAVGLSGDKPDAE PSGDVDAS+S PDVPSV+VKKPKK LFGG+FGS K K+EVPD VS + XXXXXXXXXXXXXX SGSL XXXXXXXXX XXXXXXXXX SVD+DAPS XXX AGK+P + G + G+ VKVEG D SL AGLAAGGVAA+GA+GAAVGLSGDKPDAE+PS VDAS+S P+VP VDVKKPK+ FG K P LKGK+ VPDVD + +VD XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D S G XXXXXXXXXX G+FG S K IEVPD D VPDVS G+ +ASA VXXXXXXXXXXXXXXX X PS E+P+VDLA K M G V + PS DVSVTAPDVKVEGG +SLTAGLAAG VAAVG+IGAAVGL+ DKPDAE PS VDASL+APD+PS +VKKPKKS K+P+ KGK + VDV + V P++ XXXXXXXXXXX XXXXXXXXXXXXXXX V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX G SLTAGLAAGGVAA+GA+GAAVGL P KK FGG+FG SKAKIEVP+VDAT+PEVS V +LPSVD V DL ++ + + + P LS V A XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GKM PSVEG + ++PS DVSVTAPDV EGGD SLTAGLAAG VAAV IGAAVGLSGDKPD+E PSVDA KKPKKSKFG+K PS +KKGK+S+ P+ G VD S+DVPSVSGDA LP+ S XXXXXXXXXXXXXXX XXXXXXXXXXXXX GD++A+IGAKV +A+AP++PSVEVKKPKKGLF GLSFKK GK V VPDV V G + EG SLTAG AAGG+AA+G +GAAVGLS DKPD
Sbjct: 2209 VSGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGD-----VDASVSVPDVPSVDVKKPKKGLFGGLFGSSKGKIEVPD--ADVSVPDVSAGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSVDMDAPSXXXXXXXXXXXGKMPS---VEGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAE----LPS-----------------GDVDASV--SVPDV--PSVDVKKPKKGLFG-GLSFKKPSLKGKAKVPDVDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVDASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSVSGXXXXXXXXXXXXXPLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGSKVXXXXXXXXXXXXXXSAKAP-EVPSVEVKKPKKGLFGSIFGSSKGKIEVPDADVSVPDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVSVPXXXXXXXSGSVDXXXXXXXAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSVDVDASVSAPDVPSVDVNKPKKGLFGGLFGSSKAKIEVPDADVAVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDAPSXXXXXXXXXXXGKMPSVEGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSLPDVPSVDVKKPKKGLFGGLFGS-KAKIEVPDADVSVPDVSADVXXXXXXXXXXXXXXXXXXXXXSGSLKVPDVGDXXXXXXXXXLPDVSGPEVXXXXXXXXXSGDVSVXXVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDIDAPSXXXXXXXXXXAGKMPSVE-----------------------------GGVGGELPSGDVSVTAPDVKVEGDDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKRGLFGGLSFKKPP-LKGKA------------------------------KVPDVDVAAPDVTVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMSSVEVKKPKRGLFGGLSFKKPSGKTSIEVPDADVTVPDVSASDXAVPDVGVDVAMPSIGA-------------------------------EASAAMPTVXXXXXXXXXXXXXXXXXXXXXAPSGSVEVPSVDLAGK---MXXXXGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAETPS--VDASLTAPDIPSVDVKKPKKSKF---GLKKPSFMKKGKTSTPEIPGVDASVDVPSVIGDAAVDLPTASVEAPSMXXXXXXXXXXXXXSLPSXXXXXXXXXXXXXXXXVGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSVEGPDVGASVPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDAPSGXXXXXXXXXAGKIPSVEGGVGGELPSGDVSVTAPDVKVEGGNTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVEVEKPKKGLFGGLFGSSKAKIEVPDVDATVPEVS----------VPDVSVDAPSGEVGASLPSVDDLSADVGAKVGDLKA-DLEAKVDXIAAKAPDLSVPGVSAXXXXXXXXXXXXXXSGDVXXXXXXXXXXXXXXXXXXXXXXXXGSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIDAPSGXXXXXXXXXAGKM---PSVEGGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAEAPSVDASLTAPDIPSVDVKKPKKSKFGLKKPSFMKKGKTST-----------------------------PEIPG-----------------VDTSIDVPSVSGDAAVDLPTASVEAPSMXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXVGDLSADIGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSVEVPDVPDVPSVEGGVGGELPSGDLSVTAPDVKV--------------EGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPD 4961
BLAST of mRNA_L-elsbetiae_contig883.17859.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE) HSP 1 Score: 250 bits (638), Expect = 4.280e-62 Identity = 570/1271 (44.85%), Postives = 622/1271 (48.94%), Query Frame = 1
Query: 1 ISGDLPSADVSVTAPDVKVEGGDASLTAGLAAGGVAALGAVGAAVGLSGDKPDAELPTADLPSGG------------VDA---SLNVEKPKKGLFSGIFKS-SKTKIEVPDVDADASVSDVTVTVPTG---------EADNLLARVGGVGACCPKLSTPVFSK*LAFQLFFDFSELVATRPFFFLLSGGDLPEVDTVSADLPSVEGGVEAPGIPSVDVVAPSASVDXXXXXLXGXXXXXXXVGGDISGXXXXXXXXXXXXXXXXXXXXASLTAGLAAGGVAALSAVGAAVGLSGDKPDAEVDASMPSASIDVXXXXXXXXXXSVGDVSADLGATVDDVKAPSLDKLKPKKGLFNFGLSFKKSKTPKVSTAVLFPRRNVCSVSSACRDRLITDVDA---DIPAPSVXXXXXXXXXXXXXXXXXXXXXXXDLAGKVPEVPSVGGISGXXXXXXXXXXXXXVKVEGDDASLTAGLAAGGVAALGAVDAVDAAVSLSGDKPDAEVRLADVGVSGTLPSV------------------------------DVDVEAPS--------------------VSVPDVS----GXXXXXXXXXXEMAVXXXXXXXXXXXXXXXXVSGDVSAXXXXXXXXXXXXXXSLPDXXXXXXXXXXXXXSVDASMPS-------------------------------------------------------------VGDVSADVEAKVDDI-----------AAKVPDMPSVEVKKPKKGLFGGIFSGSKGKIEVPGIDAVVPDVSGEVSXXXXXXXXXXXXXXXXXXXXXASVXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------PSVDVVGKVPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISGDLPSADVSATAPDVKVEGGDASLTAGLAAGGVAALGAAGAAVGLSGDKPDAEFPSGDVDASLSAPDVPSVEVKKPKKSLFGGIFGSSKGKLEVPDVS----------------GEXXXXXXXXXXXXXXXSGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------SVDVDAPSASXXXPSVDVAGKVPDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDISGDXXXXXXXXXXXXVKVEGGDASLAAGLAAGGVAALGAVGAAVGLSGDKPDAEVPS--VDASLSAPEVPPVDVKKPKKSKFGIKMPSILKGKSGKIDVSCSL 3150
+ G+LPS DVSVTAPDVKVEGGD SLTAG+AAGGVAA+GA+GAAVGLSGDKPDAE+ A +PS G VDA SL K KKGLF FK S K++VPD D +V DV+ + D L V G LSTP LSG ++PE+ PS E AP +PSVD XXXXX X XXXXXXX XXXXXXXXXXXXXXXXXXXX S + AA XXXXXXXXXX V L VD DI APS XXXXXXXX LAGK+P V GG+ G VKVEG D SLTAGLAA GVAA+GAV A AV LSGDKPDA++ DV S ++P V DVDV AP+ VSVPDVS XXXXXXXXXX XXX XXXXXXXXXXXX SGDV XXXXXXXXXXXXXX XXXXXXXXXXXXX V D+SADV +KV +A P++PSVEVKKPKKGLFGG+F SK KIEVP D VPDV+ XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX PSVD+ GK+P M PS VS TAPDVKVEGGD+SLTAGLAAGG+AA+GA GAAVGLSGDKPDAE PSGDVDAS++ PDVPSV+VKKPKK LFGG+FGSSK K+EVPD XXXXXXXXXXXXXXX SL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVD+DAPS XXX AGK+P + G G+ VKVEGGD SL AGLAAGGVAA+GA+GAAVGLSGDKPDAE+PS VDAS+S P+VP VDVKKPKK FG L G KI+ S SL
Sbjct: 1315 VGGELPSGDVSVTAPDVKVEGGDTSLTAGVAAGGVAAVGAIGAAVGLSGDKPDAEV-DASMPSVGDVLGDVGVKGDNVDAKSSSLEPFKLKKGLFGLSFKKLSGKKLKVPD--GDVAVPDVSXXXXXXXXXXXXXXXDVDAKLPEVSG------GLSTPDXGXXXXXXXXXXXXXXXXXXXXXXXLSGVEVPELPR-----PSGETSGSAPELPSVDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSLD-AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEXXXXXXXXXXXXVAAYLSGGVDVPSVDIDAPSXXXXXXXXX----------------LAGKMPSVE--GGVGGELPSGDVSVTAPDVKVEGGDTSLTAGLAASGVAAVGAVGA---AVDLSGDKPDAKLPSGDVDASVSVPDVPSLDVKKPRKGLFGGLSFKKPSLKGKAMVPDVDVAAPNXXXXXXXXXXXXXXXXXXXEVSVPDVSVTXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXSGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSDLSADVGSKVGXXXXXXXXXXXXXSANTPEVPSVEVKKPKKGLFGGLFGSSKAKIEVPDADVSVPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVPDVSGSVDAPSGSVEVPSVDLAGKMPGM-------------------------------------PSGGVSVTAPDVKVEGGDSSLTAGLAAGGMAAVGAIGAAVGLSGDKPDAELPSGDVDASVTVPDVPSVDVKKPKKGLFGGLFGSSKAKMEVPDADVAMPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDMDAPSXXXXXXXXXXAGKMPSVE-----------------------------GGFGGELPSGDVSVTTPDVKVEGGDTSLTAGLAAGGVAAVGAIGAAVGLSGDKPDAELPSGDVDASVSVPDVPSVDVKKPKKGLFGG-----LFGSKAKIEASSSL 2478
BLAST of mRNA_L-elsbetiae_contig883.17859.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.850e-18 Identity = 63/100 (63.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 2212 GDLPSADVSATAPDVKVEGGDASLTAGLAAGGVAALGAAGAAVGLSGDKPDAEFPSGDVDASLSAPDVPSVEVKKPKKSLFGGI-------FGSSKGKLE 2490
G+L + VS TAPDV+VEGGD SLTAGLAA GVA +GA GAAVGLSGDKPDAE PSG V SLS P+ SV+++KP+K LFGG+ G +KGK E
Sbjct: 738 GELSPSGVSVTAPDVQVEGGDTSLTAGLAASGVAIVGAIGAAVGLSGDKPDAEVPSGVVHVSLSIPEA-SVDIRKPRKVLFGGLPFKKPPLMGRTKGKHE 836 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig883.17859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig883.17859.1 >prot_L-elsbetiae_contig883.17859.1 ID=prot_L-elsbetiae_contig883.17859.1|Name=mRNA_L-elsbetiae_contig883.17859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=2205bp MPSVGGDISGDLPSADVSVTAPDVKVEGGDASLTAGLAAGGVAALSAVGAback to top mRNA from alignment at L-elsbetiae_contig883:12168..31871- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig883.17859.1 ID=mRNA_L-elsbetiae_contig883.17859.1|Name=mRNA_L-elsbetiae_contig883.17859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=19704bp|location=Sequence derived from alignment at L-elsbetiae_contig883:12168..31871- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig883:12168..31871- >mRNA_L-elsbetiae_contig883.17859.1 ID=mRNA_L-elsbetiae_contig883.17859.1|Name=mRNA_L-elsbetiae_contig883.17859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=13230bp|location=Sequence derived from alignment at L-elsbetiae_contig883:12168..31871- (Laminarionema elsbetiae ELsaHSoW15)back to top |