mRNA_L-elsbetiae_contig880.17834.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig880.17834.1
Unique NamemRNA_L-elsbetiae_contig880.17834.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: D7FK32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK32_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 5.480e-106
Identity = 156/246 (63.41%), Postives = 191/246 (77.64%), Query Frame = 1
Query:    1 KDYVAPKSCKSEEFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRHHRKVRMAYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            KDY+ PKSCKS  FGP   + LP     +EKV VI QYWGD Y+HFLVE L RIT MLD+L  + DIK+AV APK         ++ + L LLG+D  RVI+I+ EIHADLAILPSS  CG+PDTQMVNMLR  LL+A+YP + G+PP V RPV+VL+VR+++R L NNDQVRDAL Q+FP +DIVEF G GPI+ Q++ FATAS+I+APHGAGLSNM+VSPLHTPVLEIG  +CS+CY+HLA+KV
Sbjct:  122 KDYIVPKSCKSHLFGPRASSILPTSAERHEKVVVIAQYWGDEYYHFLVEALPRITLMLDVLVENLDIKVAVHAPKLGSES-HTTFIYELLALLGIDSERVIFIQTEIHADLAILPSSIPCGRPDTQMVNMLRSVLLKAMYPRTQGIPPEVPRPVIVLVVRESRRWLKNNDQVRDALKQDFPDHDIVEFWGNGPIIRQMRLFATASVIVAPHGAGLSNMVVSPLHTPVLEIGSPDCSACYLHLALKV 366          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: A0A6H5JM62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM62_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 2.250e-93
Identity = 139/216 (64.35%), Postives = 172/216 (79.63%), Query Frame = 1
Query:   91 KVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRHHRKVRMAYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            KV VI QYWGD Y+HFLVE L RIT MLD+L  + DIK+AV APK         Y+ + L LLG++  RVI+I+ EIHADLAILPSST CG+PDTQMVNMLR  LL+A+YP + G+PP V RPV+VL+VR+++R L NNDQVR+AL Q FP +DIVEF G GPI+ Q++ FATAS+I+APHGAGLSNM+ SPLHTPVLEIG  +CS+CY+HLA+K+
Sbjct:    6 KVVVIAQYWGDEYYHFLVEALPRITLMLDVLVENLDIKVAVHAPKPGSES-HTTYIYELLALLGIESERVIFIQTEIHADLAILPSSTPCGRPDTQMVNMLRSVLLKAMYPRTRGIPPQVPRPVIVLVVRESRRWLKNNDQVREALKQYFPDHDIVEFWGIGPIIRQMQLFATASVIVAPHGAGLSNMVASPLHTPVLEIGSPDCSACYLHLALKL 220          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: D7FKP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP0_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 1.080e-81
Identity = 132/250 (52.80%), Postives = 180/250 (72.00%), Query Frame = 1
Query:    1 KDYVAPKSCKSE----EFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRHHRKVRMAYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            +D VAP SC+S     +   H +T L      + KV V+TQ +G  Y+H LVENL+RIT +LD+L  + DIK+AV +    HR+    Y+    ELLG+   RV++I + IHADLA++P +T CGKP+  +V +LRHALLQ +YP +GGVPP   +P++VLIVR+ KR L NN +VRDALIQ FP +D+VEF GT PI  QL  FATAS+I+APHGAGL+N++VSPLHT +LEIGP+EC +CY+++A+K+
Sbjct:  143 QDLVAPNSCRSSVNARDVNTH-ETRLRPGEARHGKVVVLTQEYGLAYYHLLVENLSRITIVLDMLLENPDIKVAVHSISESHRE----YIYGLFELLGISQDRVLFIHK-IHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPTPPKPIMVLIVRKNKRGLGNNTEVRDALIQNFPDHDVVEFFGTDPIREQLDLFATASVIVAPHGAGLANIVVSPLHTMILEIGPIECPTCYVNMAIKL 386          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: D8LB14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB14_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 2.420e-81
Identity = 143/247 (57.89%), Postives = 177/247 (71.66%), Query Frame = 1
Query:    1 KDYVAPKSCKSEEF-GPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRHHRKVRMAYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            K+Y+ PKSC S EF G   + +LPR    ++KVFVITQ+WGD YFHFL E L R+T MLD+L A+++IKIAV AP       R  Y  + + LLG+   R+I++  EIHADLAILP STAC  P+T MVNMLR ALL+ +YP S GVPPPV RP  +++VRQ +  L N+DQ+R AL  +FP YD+VE     P L QL TFA ASLI+APH AGLS M+VSPL+TPVLEIGP  CSS Y+HLAVK+
Sbjct:  537 KNYIVPKSCGSAEFDGSSARWSLPRNAPRHDKVFVITQHWGDAYFHFLSECLPRVTLMLDVLLANSEIKIAVHAPPPTWSD-RKHYTSELMALLGIQEERLIFVDTEIHADLAILPESTACETPNTAMVNMLRSALLKGMYPSSAGVPPPVTRPPTLVLVRQKEGGLRNHDQIRKALQTKFPKYDVVESFSDSPALQQLHTFAVASLIVAPHTAGLSAMIVSPLNTPVLEIGPPTCSSGYMHLAVKL 782          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 6.140e-79
Identity = 132/254 (51.97%), Postives = 177/254 (69.69%), Query Frame = 1
Query:    4 DYVAPKSC------KSEEFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCA---PKRHHRKVRM-AYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVK 735
            D++AP +C      ++E+        +PR   SYEKVF++ Q WG  Y+HF VE+L RIT  LDIL  + DI I +      K H   V + A+ME F EL+G+   R++Y   E+HA+LAI+P++T CG PD  M+NMLR+  LQ ++PG+ GVPP   RPV+VLIVR   R L NND+V++AL + FPS+D+VEF GT P+  QLKTFATAS+I+APHGAGL+NM+V+PLHTPVLEI PLEC  C++ LA+K
Sbjct:  550 DFIAPVNCARFAEDEAEDALREAAGDMPRYINSYEKVFMMAQEWGPNYYHFTVEHLPRITLALDILLENPDIMIVMHHHGHDKWHDTSVELEAHMELF-ELIGISRERIVYTSHEVHANLAIVPTTTNCGDPDPSMINMLRNRFLQGLFPGTDGVPPVPPRPVIVLIVRSNIRGLENNDEVKEALERNFPSFDVVEFFGTDPVRDQLKTFATASMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLALK 802          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: D8LIQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ4_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.690e-78
Identity = 126/254 (49.61%), Postives = 168/254 (66.14%), Query Frame = 1
Query:    4 DYVAPKSCKSEE------FGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRHHRKVRMAYMEQFL---ELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            DY+ P +C +        F  +    +P     YEKVFV+TQ WG  Y+HF VE+L RIT  LDIL  + DI IAV      H       +E  +   E+LG+   R+I +K  IHADL I+P++T CG PD  MVNMLR+  LQ ++P + GVPP   RPV+VL+VR T R L NN++VR+AL   FPS+D+VEF GT P+  QLKTFA+A++I+APHGAGL+NM+V+PLHTPVLEI P+ C  C++ LA+K+
Sbjct:  193 DYILPLNCATAHKNEGRGFKENAVGPIPSYVKRYEKVFVMTQDWGPNYYHFTVEHLPRITLALDILLRNPDIMIAVHFHDTDHWHDTSTELEAHMGMFEILGISRERIILVKTRIHADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTDGVPPAPPRPVIVLVVRTTLRGLKNNEEVREALEMNFPSFDVVEFFGTDPVRDQLKTFASAAMIIAPHGAGLANMVVAPLHTPVLEIAPIRCPPCFLRLALKL 446          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: D7FWK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK4_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 1.140e-77
Identity = 130/259 (50.19%), Postives = 174/259 (67.18%), Query Frame = 1
Query:    4 DYVAPKSC------KSEEFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRHHRKVRM--------AYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            D++AP +C      ++E+        +PR   SYEKVFV+ Q WG  Y+HF VE+L RIT  LDIL  + DI I +    RHH + +          +ME F EL+G+   RV+    E+HA+LAI+P++T CG PD  MVNMLR+  LQ+++P +GGVPP   RPV+VLIVR   R L NN++VR+AL   F S+D+VEF GT P+  QLK FATA++I+APHGAGL+NM+V+PLHTPVLEI PLEC  C++ LA K+
Sbjct:  133 DFIAPVNCARFTKDEAEDALLEATGDVPRYVESYEKVFVMAQEWGPNYYHFTVEHLPRITLALDILIDNPDIMIVM----RHHGQDKWHDTSTEFETHMELF-ELIGISRERVVDTSHEVHANLAIVPTTTICGDPDPHMVNMLRNRFLQSLFPDTGGVPPVPPRPVIVLIVRSNIRGLENNNEVREALEMNFTSFDVVEFFGTDPVRDQLKIFATAAMIIAPHGAGLANMIVAPLHTPVLEIAPLECPPCFLRLAFKL 386          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: A0A6H5JZT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT9_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.410e-76
Identity = 127/255 (49.80%), Postives = 174/255 (68.24%), Query Frame = 1
Query:    4 DYVAPKSC------KSEEFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVC---APKRHHRKVRM-AYMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            DY+ P +C      + ++F  +    +P     YEKVFV+TQ WG  Y+HF VE+L RIT  LDIL  +++I IAV      K H     + A+M  F E+LG+   R+I +K  I+ADL I+P++T CG PD  MVNMLR+  LQ ++P + GVPP   RPV+VL+VR T R L NND+VR+AL   FPS+D+VEF GT P+  QLKTFATA++I+APHGAGL+N++V+PLHTPVLEI P+ C  C++ L++K+
Sbjct:  365 DYILPLNCATAHKHEGKDFKENAVGPVPTYVKRYEKVFVMTQDWGPNYYHFTVEHLPRITLALDILLENSEIMIAVHYHDTDKWHDTSTELEAHMGMF-EILGISRERIILVKTRIYADLVIVPTTTVCGDPDAHMVNMLRNRFLQGLFPTTNGVPPAPPRPVIVLVVRTTLRGLKNNDEVREALQINFPSFDVVEFFGTDPVRDQLKTFATAAMIIAPHGAGLANVVVAPLHTPVLEIAPIRCPPCFLRLSLKL 618          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: A0A6H5JTU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTU1_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.770e-76
Identity = 126/258 (48.84%), Postives = 177/258 (68.60%), Query Frame = 1
Query:    4 DYVAPKSCKS---------EEFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIAVCAPKRH--HRKVRMAYMEQF--LELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            DY+ P +C+               HG   LPR   +Y+KVFV+TQ W   Y+HF VE+L RIT  LDIL  + +I I++   +R   H+ +      Q   LE+LG++  RV+++ RE+HA+LAI+P+ST CG PD QMVNMLR+  LQ ++P + G+PP   RPV+VL+VR   R L+NN++V++AL + FPS+ +VEF GTG +  QL+TFATA++I+APHGAGL+NMMV+PLHTPVLEIG L C  C++ LA+K+
Sbjct:  365 DYIIPVNCQGPVRRELDFVRRISAHG---LPRSLLNYDKVFVMTQEWTPNYYHFTVEHLPRITLALDILLENPEIAISMHYYQRDPLHQDISAVQEVQMEMLEILGINRKRVVFVNREMHAELAIVPTSTNCGDPDLQMVNMLRNRFLQGLFPTTNGLPPAPPRPVIVLVVRNKLRGLMNNEEVKEALERNFPSFSVVEFFGTGSVRDQLETFATAAMIIAPHGAGLANMMVAPLHTPVLEIGTLACPPCFLRLALKL 619          
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Match: A0A6H5JMF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF5_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 2.940e-75
Identity = 134/285 (47.02%), Postives = 182/285 (63.86%), Query Frame = 1
Query:    4 DYVAPKSCKSEEFGPHGQTALPRIFTS---YEKVFVITQYWGDRYFHFLVENLARITFMLDILRAHTDIKIA-----------VCAPKRH------------------------HRKVRMA--YMEQFLELLGMDLSRVIYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPVARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKTFATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV 738
            + VAP SC+S   G +  T   R+      + KV V+TQ +G  Y+H LVENL+RIT +LD+L  + DIK+A               + H                        H KV +   Y+    ELLG+   RV++I++ IHADLA++P +T CGKP+  +V +LRHALLQ +YP +GGVPP   +P++VLIVR  KR L NND+VRDALIQ FP +D+VEF GT PI  QL+ FATAS+I+APHGAGL+N++VSPLHT VLEIGP+EC +CY+++A+K+
Sbjct:  146 NLVAPNSCQSLVNGRNVDTNETRLGPGEARHGKVVVLTQEYGLAYYHLLVENLSRITIVLDVLLENPDIKVAQFSFLFFRAGTYACDQLHDDPMPSTCRLVKSCSRPLIFTVEKHAKVELLREYIYGLFELLGISQERVMFIEK-IHADLALVPPATVCGKPNAVLVTLLRHALLQGMYPDTGGVPPIPPKPIMVLIVRANKRGLGNNDEVRDALIQNFPDHDVVEFFGTDPIREQLELFATASVIVAPHGAGLANIVVSPLHTMVLEIGPIECPTCYVNMAIKL 429          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig880.17834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK32_ECTSI5.480e-10663.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM62_9PHAE2.250e-9364.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKP0_ECTSI1.080e-8152.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LB14_ECTSI2.420e-8157.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7Y8_9PHAE6.140e-7951.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ4_ECTSI2.690e-7849.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWK4_ECTSI1.140e-7750.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT9_9PHAE2.410e-7649.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTU1_9PHAE2.770e-7648.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMF5_9PHAE2.940e-7547.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig880contigL-elsbetiae_contig880:29041..31449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.7
Seed ortholog evalue1.2e-84
Seed eggNOG ortholog2880.D7FK32
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF563)
EggNOG OGs2E14A@1,2S8GN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size738
Cds size738
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig880.17834.1prot_L-elsbetiae_contig880.17834.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig880 29041..31449 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816959.1277988-CDS-L-elsbetiae_contig880:29040..291331622816959.1277988-CDS-L-elsbetiae_contig880:29040..29133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 29041..29133 +
1691683942.044375-CDS-L-elsbetiae_contig880:29040..291331691683942.044375-CDS-L-elsbetiae_contig880:29040..29133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 29041..29133 +
1622816959.144363-CDS-L-elsbetiae_contig880:29319..294301622816959.144363-CDS-L-elsbetiae_contig880:29319..29430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 29320..29430 +
1691683942.0593514-CDS-L-elsbetiae_contig880:29319..294301691683942.0593514-CDS-L-elsbetiae_contig880:29319..29430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 29320..29430 +
1622816959.1605837-CDS-L-elsbetiae_contig880:29780..298941622816959.1605837-CDS-L-elsbetiae_contig880:29780..29894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 29781..29894 +
1691683942.067698-CDS-L-elsbetiae_contig880:29780..298941691683942.067698-CDS-L-elsbetiae_contig880:29780..29894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 29781..29894 +
1622816959.1784716-CDS-L-elsbetiae_contig880:30257..303501622816959.1784716-CDS-L-elsbetiae_contig880:30257..30350Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 30258..30350 +
1691683942.076499-CDS-L-elsbetiae_contig880:30257..303501691683942.076499-CDS-L-elsbetiae_contig880:30257..30350Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 30258..30350 +
1622816959.190608-CDS-L-elsbetiae_contig880:30750..308521622816959.190608-CDS-L-elsbetiae_contig880:30750..30852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 30751..30852 +
1691683942.0874994-CDS-L-elsbetiae_contig880:30750..308521691683942.0874994-CDS-L-elsbetiae_contig880:30750..30852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 30751..30852 +
1622816959.2021682-CDS-L-elsbetiae_contig880:31224..314491622816959.2021682-CDS-L-elsbetiae_contig880:31224..31449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 31225..31449 +
1691683942.0995655-CDS-L-elsbetiae_contig880:31224..314491691683942.0995655-CDS-L-elsbetiae_contig880:31224..31449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig880 31225..31449 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig880.17834.1

>prot_L-elsbetiae_contig880.17834.1 ID=prot_L-elsbetiae_contig880.17834.1|Name=mRNA_L-elsbetiae_contig880.17834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
KDYVAPKSCKSEEFGPHGQTALPRIFTSYEKVFVITQYWGDRYFHFLVEN
LARITFMLDILRAHTDIKIAVCAPKRHHRKVRMAYMEQFLELLGMDLSRV
IYIKREIHADLAILPSSTACGKPDTQMVNMLRHALLQAVYPGSGGVPPPV
ARPVLVLIVRQTKRRLLNNDQVRDALIQEFPSYDIVEFMGTGPILAQLKT
FATASLILAPHGAGLSNMMVSPLHTPVLEIGPLECSSCYIHLAVKV
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mRNA from alignment at L-elsbetiae_contig880:29041..31449+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig880.17834.1 ID=mRNA_L-elsbetiae_contig880.17834.1|Name=mRNA_L-elsbetiae_contig880.17834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2409bp|location=Sequence derived from alignment at L-elsbetiae_contig880:29041..31449+ (Laminarionema elsbetiae ELsaHSoW15)
AAGGACTACGTGGCACCGAAATCCTGCAAGTCAGAAGAATTCGGGCCTCA TGGACAAACGGCACTCCCAAGAATATTTACCAGCTACGAAAAGGTTTGTA CCGATGTCGAAGCACCATAGGTTATAGATTTACAAACGCACAGCTCTTCG TTTTGTCTGAGCACTGCTGCTTTTTCGCCCGCGTTAGCCTGCGCCTCCGT CCCTTGCACCACCGCACTGGTCTGCCCTCTAAAAACCAATTCATTGAAGG TTGTCACAATTTGACTTCCGTGTGTACAGGTGTTTGTGATAACCCAGTAC TGGGGAGACAGATACTTTCATTTCTTGGTGGAAAATCTGGCACGGATCAC GTTCATGCTGGATATTCTTCGGGCGCACACCGATATCAAGGTGCGCCCCT GTTGCGCAACATCTTGGCCCGCTGTGCCCGCCTGCTTTCCGCCTTGTGCT GCAACTTGATGTGGGAAAACGTGTCTCAAAATATGTAGTCTACATATTAT TGCGCAGTAGCGAATATCCGTAGCTAGTTTCAGGCACGTCGTTTTTTACG TCGCGTCGCAAAATCTCAACAAGGCGATACACGGGCGAATGGTACAACTA GTTCAGACAGCAGGAAACATCCTTCTTTGATATGCGTGGAGACTTGATGA AAACGGAAACTCTTGACTCTAAAGAATGACACGGGTCTTCCTCTCGTCCT TTTCGGTGGTGGCGTCTCTCTCGTTTGTTACCTTTGAAAGATAGCAGTTT GTGCTCCCAAACGGCATCATCGCAAGGTTCGCATGGCGTACATGGAGCAG TTCTTGGAGCTGCTTGGGATGGACTTAAGTCGTGTCATCTATATCAAAAG AGAGGTATGCCACGTTGTCTGATCTATCCATGCCTATCTGCTCCAAGACT CAACTCGTGTGTCTGTGTTGGATCCAGCTTTTGGTCAGATACTAAAGTCT ACGTACGCCCCAAGGCGAAAAATGGGTCACCTATTTAGATGCCTGACGGT TGTTTGGGCAGGTATTCAACTGGCGGTACACGGCGTCATGCAAGAAACCC AGGTCCAAATCGAACGTCGAACGATATTCAAGTGGTAATTTGGATCGACA GTTACCCGCAAGTACCGATACAGTAGATTTCAGCCCAAATGGCCCGCAAG CCACCAGTCAGTGCATACCTGTTGCTCATTCGTCGTATCTTCGCTCAAAT ATATTTCGTACCTCAAGATTCATGCGGATCTCGCCATTTTACCGAGTTCG ACTGCATGCGGGAAGCCAGACACGCAAATGGTCAACATGCTCAGACACGC CTTGCTACAGGTGAGCTACATTCTGTATCATTCTTTTGAGGGGAGTAACG TCCGCGGAGTTGACGAAACCGAAATTGTCACGTCGTTTGTCCTTCCTGTC GTGAGTTCTAACCCGGACAGCAGAAACAACTTTCGATCCATCGTGCTGTT CTTGCGTCGAGGAGTTTCGTGTACACCCTTGGCGAAGGCCGGGATTCGAT TTGTTTCAGCATAGTCATCAAAGTTGCCGAGGCCTCAAGGACGAGCCGAA TCTACGTTCCCCTGTGCCCGATGGTATGGATGTGTTGTCTGTTGTAGCGC GGGTGGAAACATTTACTACATAATTATCGGTCTAAATGATTCCCCGGTTC TCGAGTAGAAATGAAACGGCCATCTTCATCGTTTGCATGGCTCGCACTCT TGGCCTGCAGGCTGTGTATCCGGGCAGTGGAGGAGTCCCACCTCCGGTTG CGCGTCCGGTTCTTGTCCTTATCGTGCGCCAGACGAAACGGCGGCTACTG AACAATGATCAGGTACACGAGCAGTTCCAGTTTGAGACAGCACTTACATG AGATTTTCAGACTGAACCTGCCGGCTGTTGCCGTAGTTTTACCGCGGGGT GGCACGCAGAAGGCAGGAGGGGAATACTTCGGCATTCGTACTCAAAGGCG AAGACATTCATGGGTGTGCCGCATTCTCATTACTTTAGGATGGCGTGGGA GACGCGTTTGATGCCCGTACTCCAAACCCTAGCCTATCCTCACCCACGGC GTGTTTGCTACCTATATCCCCCCCCCCAAAATACGAATAGTGATACGATG GTGGGCAGAGTGGGCTCTCAGCGTTTGCTAACTTTCGCATTCCTTGAACC GCGATGTATGTATACGCCGTTGCTTCACACCAAGGTACGAGACGCTCTGA TTCAGGAATTTCCCAGCTATGATATTGTGGAGTTTATGGGAACCGGACCT ATCCTGGCGCAGCTCAAGACGTTCGCAACAGCTTCTCTAATCTTGGCTCC CCATGGCGCCGGTTTGTCTAACATGATGGTGTCGCCACTTCACACACCAG TTCTGGAGATAGGCCCGCTAGAGTGCTCATCCTGCTACATACATCTCGCC GTGAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig880:29041..31449+

>mRNA_L-elsbetiae_contig880.17834.1 ID=mRNA_L-elsbetiae_contig880.17834.1|Name=mRNA_L-elsbetiae_contig880.17834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig880:29041..31449+ (Laminarionema elsbetiae ELsaHSoW15)
AAGGACTACGTGGCACCGAAATCCTGCAAGTCAGAAGAATTCGGGCCTCA
TGGACAAACGGCACTCCCAAGAATATTTACCAGCTACGAAAAGAAGGACT
ACGTGGCACCGAAATCCTGCAAGTCAGAAGAATTCGGGCCTCATGGACAA
ACGGCACTCCCAAGAATATTTACCAGCTACGAAAAGGTGTTTGTGATAAC
CCAGTACTGGGGAGACAGATACTTTCATTTCTTGGTGGAAAATCTGGCAC
GGATCACGTTCATGCTGGATATTCTTCGGGCGCACACCGATATCAAGGTG
TTTGTGATAACCCAGTACTGGGGAGACAGATACTTTCATTTCTTGGTGGA
AAATCTGGCACGGATCACGTTCATGCTGGATATTCTTCGGGCGCACACCG
ATATCAAGATAGCAGTTTGTGCTCCCAAACGGCATCATCGCAAGGTTCGC
ATGGCGTACATGGAGCAGTTCTTGGAGCTGCTTGGGATGGACTTAAGTCG
TGTCATCTATATCAAAAGAGAGATAGCAGTTTGTGCTCCCAAACGGCATC
ATCGCAAGGTTCGCATGGCGTACATGGAGCAGTTCTTGGAGCTGCTTGGG
ATGGACTTAAGTCGTGTCATCTATATCAAAAGAGAGATTCATGCGGATCT
CGCCATTTTACCGAGTTCGACTGCATGCGGGAAGCCAGACACGCAAATGG
TCAACATGCTCAGACACGCCTTGCTACAGATTCATGCGGATCTCGCCATT
TTACCGAGTTCGACTGCATGCGGGAAGCCAGACACGCAAATGGTCAACAT
GCTCAGACACGCCTTGCTACAGGCTGTGTATCCGGGCAGTGGAGGAGTCC
CACCTCCGGTTGCGCGTCCGGTTCTTGTCCTTATCGTGCGCCAGACGAAA
CGGCGGCTACTGAACAATGATCAGGCTGTGTATCCGGGCAGTGGAGGAGT
CCCACCTCCGGTTGCGCGTCCGGTTCTTGTCCTTATCGTGCGCCAGACGA
AACGGCGGCTACTGAACAATGATCAGGTACGAGACGCTCTGATTCAGGAA
TTTCCCAGCTATGATATTGTGGAGTTTATGGGAACCGGACCTATCCTGGC
GCAGCTCAAGACGTTCGCAACAGCTTCTCTAATCTTGGCTCCCCATGGCG
CCGGTTTGTCTAACATGATGGTGTCGCCACTTCACACACCAGTTCTGGAG
ATAGGCCCGCTAGAGTGCTCATCCTGCTACATACATCTCGCCGTGAAGGT
GGTACGAGACGCTCTGATTCAGGAATTTCCCAGCTATGATATTGTGGAGT
TTATGGGAACCGGACCTATCCTGGCGCAGCTCAAGACGTTCGCAACAGCT
TCTCTAATCTTGGCTCCCCATGGCGCCGGTTTGTCTAACATGATGGTGTC
GCCACTTCACACACCAGTTCTGGAGATAGGCCCGCTAGAGTGCTCATCCT
GCTACATACATCTCGCCGTGAAGGTG
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