mRNA_L-elsbetiae_contig880.17831.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: D7G222_ECTSI (Glycosyltransferase, family GT34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G222_ECTSI) HSP 1 Score: 310 bits (793), Expect = 1.920e-99 Identity = 140/167 (83.83%), Postives = 156/167 (93.41%), Query Frame = 1
Query: 10 AGAG-EGKRLTFGIILMCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTGNYPFQYEQ 507
AG G EG L FGIILMCDEGMWP++YS++SIANK+AYAALHGYDV+VAT+ADIDRSRPAAWSKLLVL KHLGSYDYV+F+DIDAF+MNPAFKLEWLLDVA +QQQTGG+DGWGAG ESDLIVTQDWNGPNSG++L++NSDFSRWLLQEWWDQKQFV G YPF YEQ
Sbjct: 157 AGGGREGGGLRFGIILMCDEGMWPQQYSEKSIANKKAYAALHGYDVIVATSADIDRSRPAAWSKLLVLSKHLGSYDYVIFVDIDAFVMNPAFKLEWLLDVARKQQQTGGIDGWGAGKESDLIVTQDWNGPNSGVILIKNSDFSRWLLQEWWDQKQFVNGPYPFHYEQ 323
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A6H5L917_9PHAE (GT34 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L917_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.150e-96 Identity = 139/165 (84.24%), Postives = 153/165 (92.73%), Query Frame = 1
Query: 13 GAGEGKRLTFGIILMCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTGNYPFQYEQ 507
G GE L FGIILMCDEGMWP+EYS++SIANK+AYAALHGYDV+VAT+ADIDRSRPAAWSKLLVL KHLGSYDYV+F+DIDAF+MNPAFKLEWLLDVA +QQQTG +DGWGAGN SDLIVTQDWNGPNSG++LV+NSDFSRWLLQEWWDQKQFV G YPF YEQ
Sbjct: 331 GGGERGGLRFGIILMCDEGMWPKEYSEKSIANKKAYAALHGYDVIVATSADIDRSRPAAWSKLLVLSKHLGSYDYVIFVDIDAFVMNPAFKLEWLLDVARKQQQTGEIDGWGAGNGSDLIVTQDWNGPNSGVILVKNSDFSRWLLQEWWDQKQFVDGPYPFHYEQ 495
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A7S2WUX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUX7_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.880e-36 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 1
Query: 34 LTFGIILMCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWW-----DQKQFVTGN-------YPFQYEQ 507
L FGI+L+ D+GMW + S S+ NK YA HGYD+VVA DIDRSRPAAWSK ++KHL YDY+++ D D +MN KLE L+ DG +D+I+T+DWNG N+G+ ++RNS ++ W L+E W +Q+ + YPF+YEQ
Sbjct: 74 LRFGILLLFDDGMWSSQLSQDSLENKRQYAQRHGYDLVVARGKDIDRSRPAAWSKFKAMRKHLPRYDYLLYTDADTIVMNQEVKLESLVG-----------DG-----SADVIITEDWNGVNTGVFMLRNSTWTYWFLREAWGLQGSEQEHMALHDRSAGGMKYPFEYEQ 227
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A482SUI0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUI0_9ARCH) HSP 1 Score: 127 bits (320), Expect = 1.030e-30 Identity = 66/169 (39.05%), Postives = 100/169 (59.17%), Query Frame = 1
Query: 28 KRLTFGIILMCDE--GMWPREYSDRSIANKEAYAALHGYDVVVATAADI-DRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTG------NYPFQYEQ 507
K L G++++ ++ G W +E R + N++ Y+ +H Y +VVA DI DRS+P AW+KLL K+L YDY+++ID+D IMN K E +D+A + D+I+T+DWNGPN+G+ LV+ S +S W LQ ++Q Q V +YPF+YEQ
Sbjct: 90 KALKIGLLMLYNDQDGTWDQELMSRVLKNRDEYSRMHDYSIVVAN--DILDRSKPPAWTKLLAADKYLDKYDYLMYIDMDIVIMNMTVKAEHFIDMAP---------------DKDMIMTEDWNGPNTGVWLVKKSAWSHWFLQTAFNQTQLVPKKSPEGISYPFEYEQ 241
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A2R5FF46_9STRA (Xyloglucan 6-xylosyltransferase 1 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FF46_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.560e-30 Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 82 EYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTGNYPFQYEQVGALRLEG 531
E S++NK+AYA+ HGYD+++ A +ID SRPA WSKL +LQKHL YDY+V+ D DA MN + +E LLD +L +D NSG+ ++ NS++S W L+E WDQ VTG +PF YEQ L G
Sbjct: 40 ELRTSSLSNKKAYASHHGYDLLIGDA-EIDPSRPAPWSKLTILQKHLPDYDYMVWSDADAIFMNMSIAIEDLLD-----------------GSHELFFAEDVASINSGVFIIHNSEWSLWWLKECWDQTWLVTGRHPFLYEQRAMQYLYG 171
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A7S1XNR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNR5_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.230e-30 Identity = 68/170 (40.00%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 34 LTFGIILMCDEGMW--PREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTGN----------YPFQYEQ 507
L GI+L D+ W P + R+ N+++YA L+GYDV++ T A ++ RPAAWSKLL L++HL YD++ ID DA +MNP+ +LE L+ A +LI+T DW+GPNSGI+L+RN ++ W L E + Q+ FV +PF+YEQ
Sbjct: 79 LRIGILLQVDDAWWAVPGGIARRAYDNRKSYADLYGYDVILETKA-VESGRPAAWSKLLGLRRHLQHYDWIAIIDADALVMNPSIRLERLIPADA------------AARGVNLILTDDWSGPNSGIMLLRNDAWTYWFLDELYAQELFVNRRPPPGLSAKPQWPFEYEQ 235
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A096PBI5_OSTTA (Galactosyl transferase n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PBI5_OSTTA) HSP 1 Score: 120 bits (302), Expect = 1.720e-28 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 28 KRLTFGIILMCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFV----TGNYPFQYEQ 507
+RL GI+ +CD G+ S+ANK+AYA HGYD +V A IDRSRP +WSKLL ++KHL YD+++++D+DA +MNP LE ++D + D ++ D NG N G+ LVRN+ ++ W L E W Q+ V T N F+YEQ
Sbjct: 41 RRLKGGIVSLCDGGV--DAICAPSMANKQAYADAHGYDFIV-DADVIDRSRPTSWSKLLAMRKHLPRYDFLLYVDVDAVVMNPETGLEDIVDF-----------------DYDQVLAADSNGVNCGVWLVRNTPWTLWFLDELWAQEHLVAPKNTWNMLFKYEQ 184
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: C1MP96_MICPC (Uncharacterized protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MP96_MICPC) HSP 1 Score: 124 bits (310), Expect = 2.230e-28 Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 1
Query: 40 FGIILMCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTGNYPFQYEQ 507
+ I+ +CD S ANK YAA HGYD++V T D SRPAAWSK+L ++KHL Y++V+FID+D IMNP KLE D+A+ + D ++ D NG NSG+ LV+NS + W L E W Q VTG Y F YEQ
Sbjct: 211 YAILTLCDSNTG--YICVASAANKRRYAAKHGYDLIVVTEV-ADASRPAAWSKILEVRKHLPKYEWVLFIDVDTLIMNPNVKLE---DIAD--------------DSVDQVIAADHNGINSGVWLVKNSRWMMWFLDELWAQTDLVTGPYLFHYEQ 346
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A4S7Q3_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S7Q3_OSTLU) HSP 1 Score: 118 bits (296), Expect = 6.100e-28 Identity = 63/163 (38.65%), Postives = 94/163 (57.67%), Query Frame = 1
Query: 28 KRLTFGIILMCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFV---TGNYPFQYEQ 507
K+ G+I +CD+G+ +S+ANK+AYA HGYD++V IDR+RP +WSKLL ++K+L YD+++++D+D IMNP KLE ++D D ++ D NG N G+ +VRN+ + W + E W Q Q V T N F+YEQ
Sbjct: 10 KKFKIGMISLCDDGV--EAICAQSMANKQAYADYHGYDLIVDEEI-IDRNRPTSWSKLLAMRKYLPDYDFMLYVDVDTIIMNPEKKLEDIVDY-----------------NYDQMLAADKNGLNCGVWMVRNTPWMLWFIDEMWAQDQLVAPKTWNMLFKYEQ 152
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Match: A0A7S1TXZ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXZ2_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.220e-27 Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 94 RSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLVLQKHLGSYDYVVFIDIDAFIMNPAFKLEWLLDVAEQQQQTGGVDGWGAGNESDLIVTQDWNGPNSGIVLVRNSDFSRWLLQEWWDQKQFVTG-----------NYPFQYEQ 507
RS+ N+ YAA GYDV++ T A ++R RPAAWSKLL L++HL +D++ ID+DA IMNPA +LE L+ Q GV+ +++T DW+GPNSG++L+RN ++ W L E + Q+ F+ ++PF YEQ
Sbjct: 10 RSLENRRRYAARWGYDVILETRA-VERRRPAAWSKLLGLRRHLQDFDWIAIIDVDALIMNPAVRLERLIP---QGAAARGVN---------VVLTSDWSGPNSGVMLLRNDPWTFWFLDELYAQELFLADRVPAPGLSRRLHWPFLYEQ 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig880.17831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig880.17831.1 >prot_L-elsbetiae_contig880.17831.1 ID=prot_L-elsbetiae_contig880.17831.1|Name=mRNA_L-elsbetiae_contig880.17831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp MCDEGMWPREYSDRSIANKEAYAALHGYDVVVATAADIDRSRPAAWSKLLback to top mRNA from alignment at L-elsbetiae_contig880:3248..5975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig880.17831.1 ID=mRNA_L-elsbetiae_contig880.17831.1|Name=mRNA_L-elsbetiae_contig880.17831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2728bp|location=Sequence derived from alignment at L-elsbetiae_contig880:3248..5975+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig880:3248..5975+ >mRNA_L-elsbetiae_contig880.17831.1 ID=mRNA_L-elsbetiae_contig880.17831.1|Name=mRNA_L-elsbetiae_contig880.17831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1548bp|location=Sequence derived from alignment at L-elsbetiae_contig880:3248..5975+ (Laminarionema elsbetiae ELsaHSoW15)back to top |