mRNA_L-elsbetiae_contig8795.17824.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A6H5JTX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTX4_9PHAE) HSP 1 Score: 218 bits (556), Expect = 2.240e-66 Identity = 96/106 (90.57%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 13 HFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSSEPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTTDNTVRNNYN 330
HFYASHV+FAIWNA+NDPAFAWLIDNTTASGGDRR + YGGPLWCLAFLIPWWPWSSEPGS LVG+HFCVSICMFDSFLTYVLLVHCALLADLTTDNT+RNNYN
Sbjct: 51 HFYASHVVFAIWNAINDPAFAWLIDNTTASGGDRRLPAIKYGGPLWCLAFLIPWWPWSSEPGSFLVGLHFCVSICMFDSFLTYVLLVHCALLADLTTDNTLRNNYN 156
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A7S4JC94_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JC94_GUITH) HSP 1 Score: 123 bits (308), Expect = 1.100e-30 Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSSEPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTTDNTVRNNYN 330
+ S FYA HV++A+WNA+NDP F W+ID A RR L YGGP+W L+F++ W+PWSS+ S +HF +S+ M+D FLTYV++ CALLADL D+ R N
Sbjct: 41 LQPSSFYAVHVVYAVWNAINDPLFGWMIDQQ-ADRSHRRLPVLKYGGPMWSLSFMVTWYPWSSDGNSWAAVLHFAMSMMMYDGFLTYVMITKCALLADLCVDSRERLKLN 149
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: UPI00186448C5 (transmembrane protein 180 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186448C5) HSP 1 Score: 111 bits (278), Expect = 1.330e-26 Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLT 300
IS+S F+ S VI+ IWNAVNDP F +L DN+ A+ RR + YG P + LAFL+PW+PW S EPG L G+H V++C FD LT+VLL CAL A+++
Sbjct: 44 ISESAFHQSQVIYMIWNAVNDPLFGYLQDNSRAACCTRRRLSILYGAPFYALAFLLPWFPWRSYEPGDWLSGLHLTVALCAFDGMLTFVLLAQCALFAEIS 144
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: UPI001CF76E38 (transmembrane protein 180-like isoform X3 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF76E38) HSP 1 Score: 108 bits (270), Expect = 3.740e-26 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTTDNTVR 318
IS++ F+ + V+F IWNA+NDP F ++ DN+ A RR + YG PL+ LAFL+PW+PW E G L G+H V++C FD LT+VLL CAL A+++T + R
Sbjct: 61 ISEAAFHQAQVVFMIWNAINDPLFGYIQDNSKAPCCSRRQVSILYGAPLYALAFLLPWFPWKQYEEGDWLSGLHLIVALCAFDGLLTFVLLAQCALFAEISTRHESR 167
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A7S2RVJ6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RVJ6_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.770e-26 Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSSEPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTTDNTVRNNYN 330
I+ S+ V +AIWNA+NDP F W+ID++ A RR L YGGP+WC+ F+ ++PWS + S L H+ SI +D FLTYVL+V CAL ADL D+ R N
Sbjct: 47 INPSYLIGGQVAYAIWNALNDPVFGWMIDHS-ADTSSRRLPVLKYGGPMWCMTFMGTFYPWSYDGQSYLAAAHYLFSIFCYDGFLTYVLIVKCALFADLCVDSEDRTRLN 155
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A8D2JFX4_VARKO (Uncharacterized protein n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2JFX4_VARKO) HSP 1 Score: 108 bits (270), Expect = 1.880e-25 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTTDNTVR 318
IS++ F+ + V+F IWNA+NDP F ++ DN+ A RR + YG PL+ LAFL+PW+PW E G L G+H V++C FD LT+VLL CAL A+++T + R
Sbjct: 61 ISEAAFHQAQVVFMIWNAINDPLFGYIQDNSKAPCCSRRQVSILYGAPLYALAFLLPWFPWKQYEEGDWLSGLHLIVALCAFDGLLTFVLLAQCALFAEISTRHESR 167
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: UPI0020261F8C (transmembrane protein 180-like n=3 Tax=Gekkota TaxID=8560 RepID=UPI0020261F8C) HSP 1 Score: 108 bits (269), Expect = 2.330e-25 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTT 303
IS+ F+ + V+F IWNA+NDP F ++ DN++A+ RR A + YG PL+ LAFL+PW+PW + G L G+H V++C FD LT+VLL CAL A+ +T
Sbjct: 42 ISEGAFHQAQVVFMIWNAINDPLFGYIQDNSSAACCSRRQASIFYGAPLYALAFLLPWFPWKQYQEGDWLSGLHLVVALCAFDGMLTFVLLAQCALFAETST 143
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A671RZN1_9TELE (Major facilitator superfamily domain containing 13B (pseudogene) n=2 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671RZN1_9TELE) HSP 1 Score: 105 bits (263), Expect = 4.360e-25 Identity = 49/101 (48.51%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLT 300
IS++ F+ S V+F IWNA+NDP F +L DN+ RR + YG PL+CL+FL+ W+PW + EP L GVH V++C FD LT+VLL CAL A+++
Sbjct: 40 ISETAFHQSQVVFMIWNALNDPLFGYLQDNSRMECCSRRRLSILYGAPLYCLSFLLAWFPWRTYEPEDWLSGVHLMVTLCAFDGMLTFVLLAQCALFAEIS 140
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A851D5X7_TODME (MF13A protein (Fragment) n=2 Tax=Coraciiformes TaxID=8936 RepID=A0A851D5X7_TODME) HSP 1 Score: 105 bits (263), Expect = 4.490e-25 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTTDNTVR 318
IS+ F+ + V+F IWNA+NDP F ++ DN+ + RR + YG PL+ LAFL+PW+PW E G L G+H V++C FD LT+VLL CAL A+++T + R
Sbjct: 40 ISEVAFHQAQVVFMIWNAINDPLFGYIQDNSKLACCSRRRVSILYGAPLYALAFLLPWFPWKHYEEGDWLSGLHLIVALCAFDGLLTFVLLAQCALFAEISTRHESR 146
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Match: A0A670KCU1_PODMU (Transmembrane protein 180-like n=4 Tax=Lacertinae TaxID=162266 RepID=A0A670KCU1_PODMU) HSP 1 Score: 107 bits (266), Expect = 5.900e-25 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 1 ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWCLAFLIPWWPWSS-EPGSLLVGVHFCVSICMFDSFLTYVLLVHCALLADLTT 303
IS+S F+ + V+F IWNA+NDP F ++ DN+ RR + YG PL+ LAFL+PW+PW E G L G+H V++C FD LT+VLL CAL A+++T
Sbjct: 42 ISESAFHQAQVVFMIWNAINDPLFGYIQDNSKVPCCSRRRFSILYGAPLYALAFLLPWFPWKQYEEGDWLSGLHLIVALCAFDGLLTFVLLAQCALFAEIST 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8795.17824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8795.17824.1 >prot_L-elsbetiae_contig8795.17824.1 ID=prot_L-elsbetiae_contig8795.17824.1|Name=mRNA_L-elsbetiae_contig8795.17824.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp ISDSHFYASHVIFAIWNAVNDPAFAWLIDNTTASGGDRRCACLPYGGPLWback to top mRNA from alignment at L-elsbetiae_contig8795:6648..7920+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8795.17824.1 ID=mRNA_L-elsbetiae_contig8795.17824.1|Name=mRNA_L-elsbetiae_contig8795.17824.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1273bp|location=Sequence derived from alignment at L-elsbetiae_contig8795:6648..7920+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8795:6648..7920+ >mRNA_L-elsbetiae_contig8795.17824.1 ID=mRNA_L-elsbetiae_contig8795.17824.1|Name=mRNA_L-elsbetiae_contig8795.17824.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig8795:6648..7920+ (Laminarionema elsbetiae ELsaHSoW15)back to top |