mRNA_L-elsbetiae_contig8760.17800.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: D8LHP5_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP5_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 4.210e-181 Identity = 257/330 (77.88%), Postives = 284/330 (86.06%), Query Frame = 2 Query: 38 EEQPHFNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLDCPAAELCTANLKTNEAMWVAKEKIGDNSLDFVAVPVPATPLVSPP------LLQRARTRRSSLFKAIQVFRSG 1009 +EQPHFNNFMV+VEQGYGSGKG G NVYH+RRHAADVTQAVHYFLK+CNLGQHL++AEVAALLLG+LIHD+KHPGRSNAFLT+ GH LA+TYNDVSVLEN+HLSEAFFLLR+DECNFFRD+APATAQE+R IMVSMVLATDLK HFDVLGEFNSHLADV+EG+LV+EGRSKTY CAMKVCIKSADISHPAR T LHLRWTRD+I+EFFLQGDEEKSLGLEPSPLCDR NTDI SSQKNFISFLV PLF SWV+FLDCPAA+LCT NLK NEAMWVA+EK GDNS DF P A +PP L SS+ A+ + + G Sbjct: 74 KEQPHFNNFMVKVEQGYGSGKGAGVTNVYHSRRHAADVTQAVHYFLKVCNLGQHLQDAEVAALLLGSLIHDFKHPGRSNAFLTRIGHKLAITYNDVSVLENYHLSEAFFLLREDECNFFRDLAPATAQEIRHIMVSMVLATDLKEHFDVLGEFNSHLADVREGVLVNEGRSKTYACAMKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVAFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATCP--AGTQATPPXXXXXALPVNVNAYSSSMVNAVNLPQGG 401
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: A0A836CJS2_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS2_9STRA) HSP 1 Score: 380 bits (976), Expect = 1.700e-119 Identity = 185/310 (59.68%), Postives = 231/310 (74.52%), Query Frame = 2 Query: 50 HFNNFMVEVEQGYGSGKGPGDIN------------------VYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLDCPAAELCTANLKTNEAMWVAKEKIGDNSLDFVAVPVPAT 925 HF N++V++E GYGSG G +N VYHNRRHAADVTQAVHYF+++C+LG L + E+ +LLLGA++HD+KHPGRSNAFL KT L+L YNDVSVLENFH+SEAF +LR+D CNF R+V PAT + +R M+ +VLATDLK HFD+LGEFNSHL D++ I +E +++TY AMK+C+KSADISHP R LHL+WT+ +I+EFFLQGDEEK GLE SPL DRD T I SQK FI+FLVKPLF SWVSFL+ P A+ C NL+ NEAMWVAKEK GD++L+ + P+T Sbjct: 500 HFTNYIVQIEAGYGSGLSKGSVNIPSXXXXXXXXXXXXXXXVYHNRRHAADVTQAVHYFMQVCHLGASLTDIEMISLLLGAIVHDFKHPGRSNAFLIKTFSELSLVYNDVSVLENFHISEAFRVLRQDRCNFMRNVDPATVRSIRDTMIPLVLATDLKFHFDLLGEFNSHLTDMRTEI-GEESKTRTYMSAMKICMKSADISHPTRPMFLHLQWTKAVIEEFFLQGDEEKRRGLEISPLMDRDTTAIADSQKGFINFLVKPLFKSWVSFLNTPEAQTCLTNLEVNEAMWVAKEKRGDDTLEALVPDPPST 808
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: A0A6H5JX66_9PHAE (PDEase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX66_9PHAE) HSP 1 Score: 325 bits (832), Expect = 3.110e-106 Identity = 153/182 (84.07%), Postives = 171/182 (93.96%), Query Frame = 2 Query: 44 QPHFNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKS 589 +PHFN FMV+VEQGYGSG G G NVYH+RRHAADVTQAVHYFLK+CNLGQHL++ EVAALLLG+LIHD+KHPGRSNAFLT+TGH LA+TYNDVSVLEN+HLSEAFFLLRKDECNFFRD+APATAQE+R IMVSMVLATDLK HFD+LGEFNSHLADV+EG+LVDEGRSKTY CAMKV I++ Sbjct: 63 KPHFNTFMVKVEQGYGSGTGAGVTNVYHSRRHAADVTQAVHYFLKVCNLGQHLQDVEVAALLLGSLIHDFKHPGRSNAFLTRTGHKLAITYNDVSVLENYHLSEAFFLLRKDECNFFRDLAPATAQEIRHIMVSMVLATDLKEHFDILGEFNSHLADVREGVLVDEGRSKTYACAMKVPIRT 244
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: A0A836CMF4_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF4_9STRA) HSP 1 Score: 218 bits (554), Expect = 1.690e-61 Identity = 124/286 (43.36%), Postives = 171/286 (59.79%), Query Frame = 2 Query: 50 HFNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLDCPAAELCTANLKTNEAMWVAKEKIGDNSLDFVA 907 HF N++V++E GYGSG G G ++VYHNRRH ADVTQAVHYF+++C+LG L + E++ LLLGA++HD+KHPGRSNAFL KT L+L YNDVSVLENFH+SE +LK + +V+ E ++ AD + ++ ++ C K+ + S + RQ + D ++ + + L SPL DRD T I S+K FI+FLVKPLF SWVSFL+ P A+ C NL+ +EAMWVAKEK GD++L+ +A Sbjct: 172 HFTNYIVQIEAGYGSGLGKGSVSVYHNRRHMADVTQAVHYFMQVCHLGASLTDIEMSGLLLGAIVHDFKHPGRSNAFLIKTFSELSLVYNDVSVLENFHISEV---------------------------------QELKLNTNVVREAHAPCADWCDVSML-RASTQMEQCNWKLEVYS-EAFRVLRQDRCNFMRNVDSA---IVRNIRDTMIPL-ISPLMDRDTTAIADSRKGFINFLVKPLFKSWVSFLNTPKAQTCLTNLEVSEAMWVAKEKRGDDTLEALA 418
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: UPI000763A0AD (calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI000763A0AD) HSP 1 Score: 207 bits (527), Expect = 2.770e-57 Identity = 108/252 (42.86%), Postives = 148/252 (58.73%), Query Frame = 2 Query: 53 FNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLD 808 NF+ +E+GY K P YHN H ADV Q VHY L L L + E+ A+L+ A+ HD++H G +N F +G +AL YND +VLEN+H+S F +L+ D+CN +++ +E R +++ MVLATD+ HF L LA + I +SK AM + + ADISHPA++ LH RWT +++EFFLQGD EK LGL SPLCDR+NT I SQ FI F+V+P T L+ Sbjct: 140 MENFLCRIEEGYSRHKNP-----YHNNLHGADVAQTVHYMLCQTGLMNWLSDLEIFAMLIAAITHDFEHTGTTNNFHVMSGTEIALLYNDRAVLENYHISSTFRILKDDDCNILQNLTKEEFREFRTLVIDMVLATDMSFHFQQLKTMKQLLASPEPTI----DKSK----AMSMVLHCADISHPAKEWDLHYRWTSQLLEEFFLQGDMEKKLGLPFSPLCDRNNTLIAESQIGFIEFIVEPSMTVCSDMLE 378
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: A0A6G0T5I9_APHGL (Phosphodiesterase n=1 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0T5I9_APHGL) HSP 1 Score: 207 bits (527), Expect = 3.650e-57 Identity = 108/252 (42.86%), Postives = 149/252 (59.13%), Query Frame = 2 Query: 53 FNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLD 808 NF+ +E+GY K P YHN H ADV Q VHY L L L + E+ A+L+ A+ HD++H G +N F +G +AL YND +VLEN+H+S F +L+ D+CN +++ +E R +++ MVLATD+ HF L + LA + I +SK AM + + ADISHPA++ LH RWT +++EFFLQGD EK LGL SPLCDR+NT I SQ FI F+V+P T L+ Sbjct: 146 MENFLCRIEEGYSRHKNP-----YHNNLHGADVAQTVHYMLCQTGLMNWLSDLEIFAMLIAAITHDFEHTGTTNNFHVMSGTEIALLYNDRAVLENYHISSTFRILKDDDCNILQNLTKEEFREFRTLVIDMVLATDMSFHFQQLKTMKTLLASPEPTI----DKSK----AMSMVLHCADISHPAKEWSLHYRWTCQLLEEFFLQGDMEKKLGLPFSPLCDRNNTLIAESQIGFIEFIVEPSMTVCSDMLE 384
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: UPI000B933528 (calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A-like isoform X4 n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B933528) HSP 1 Score: 207 bits (526), Expect = 2.540e-56 Identity = 106/252 (42.06%), Postives = 149/252 (59.13%), Query Frame = 2 Query: 53 FNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLD 808 NF+ +E+GY K P YHN H ADV Q VHY L L L + E+ A+L+ A+ HD++H G +N F +G +AL YND +VLEN+H+S F +L+ ++CN +++ +E R +++ MVLATD+ HF L LA + L+D+ + AM + + ADISHPA++ LH RWT +++EFFLQGD EK LGL SPLCDR+NT I SQ FI F+V+P T L+ Sbjct: 243 MENFLCRIEEGYSRHKNP-----YHNNLHGADVAQTVHYMLCQTGLMNWLSDLEIFAMLIAAITHDFEHTGTTNNFHVMSGTEIALLYNDRAVLENYHISSTFRILKDEDCNILQNLTKEEFREFRTLVIDMVLATDMSFHFQQLKTMKQLLASPEP--LIDKSK------AMSMVLHCADISHPAKEWELHYRWTSQLLEEFFLQGDMEKKLGLPFSPLCDRNNTLIAESQIGFIEFIVEPSMTVCSDMLE 481
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: A0A6A4WJA3_AMPAM (Phosphodiesterase n=8 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WJA3_AMPAM) HSP 1 Score: 206 bits (524), Expect = 3.170e-56 Identity = 110/258 (42.64%), Postives = 152/258 (58.91%), Query Frame = 2 Query: 53 FNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLDCPAAEL 826 + ++ VE GYG K P YHN HAADVTQ VHY + L + L + EV A+LL A++HD +H G +N F + AL YND SVLENFH+S AF +LR++ECNF +++ ELR ++V MVLATD+ HF + +++ + + + +SK + C DISHP++ LH WT+ ++ EFFLQGD+EK LGL SPLCDR T +P SQ FI F+V+P + L+ AA L Sbjct: 291 LDTYLQTVEHGYGRYKNP-----YHNSSHAADVTQTVHYIMSQMALVRFLTDLEVLAMLLAAIVHDVEHTGTTNNFHVNSSSETALIYNDKSVLENFHVSNAFRILREEECNFLCNLSREEYTELRSLVVDMVLATDMSSHFQQIKCMKNYVINSESAV----DKSKILNLVLHCC----DISHPSKDWELHSHWTKLLLDEFFLQGDKEKQLGLPVSPLCDRATTLVPQSQIGFIEFIVEPSMSVCGELLEKVAAYL 535
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: A0A7S4DUC3_9EUKA (Phosphodiesterase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DUC3_9EUKA) HSP 1 Score: 203 bits (517), Expect = 4.500e-56 Identity = 113/279 (40.50%), Postives = 158/279 (56.63%), Query Frame = 2 Query: 53 FNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDR-DNTDIPSSQKNFISFLVKPLFTSWVSFLDCPAAEL---CTANLKTNEAMWVAKEK 877 NF+ ++E+GY N YHN HAADV + HYFLK+ L +++ E+ +L A +HD+ HPG +N FL T H LA+ YND SVLEN HL+ ++ +L +DE N FR ++R+I+V MVLATDL HHF LG+F + VQ G +D T +K+ +K AD+ H A+ H RWT I QE F QGD+EK GL+PSP DR +I SQ F+ +V+PLF ++ FL+ + + C L+ N W + K Sbjct: 204 LKNFITQIERGYQK-------NPYHNSLHAADVVRTCHYFLKIGGLCGYMKPLEMMGSMLAAAVHDFNHPGVNNNFLVATKHNLAILYNDRSVLENHHLAASYRILLQDEFNIFRHFEREKRMQIRKIIVGMVLATDLAHHFQELGKFTT---SVQSG-KIDRKEFDTRMMILKIMLKCADLGHTAKVFEQHKRWTGRITQEMFSQGDQEKMKGLDPSPYMDRAKEKNIARSQLGFLQAIVEPLFRRFIGFLESDSKAINIPCMKLLEGNLQYWKNEAK 471
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Match: UPI001568850C (calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1 n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568850C) HSP 1 Score: 203 bits (516), Expect = 4.600e-56 Identity = 111/280 (39.64%), Postives = 158/280 (56.43%), Query Frame = 2 Query: 53 FNNFMVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEVAALLLGALIHDYKHPGRSNAFLTKTGHALALTYNDVSVLENFHLSEAFFLLRKDECNFFRDVAPATAQELRQIMVSMVLATDLKHHFDVLGEFNSHLADVQEGILVDEGRSKTYTCAMKVCIKSADISHPARQTGLHLRWTRDIIQEFFLQGDEEKSLGLEPSPLCDRDNTDIPSSQKNFISFLVKPLFTSWVSFLDCPAAELCTANLKTNEAMWVAKEKIGDNS 892 NF+ +E+GY P YHN HAADV Q VHY L L L + E+ A L+ A++HD++H G +N F +G AL YND +VLEN H+S AF L+R ++CN ++++ +E R +++ MVLATD+ HF L S L+ + GI +SK + + C DISHPA++ LH RWT ++ EFFLQGD+E+ LGL SPLCDR+NT + SQ FI F+V+P L+C L +++ N +E I + S Sbjct: 194 LENFLSRIEEGYCKFHNP-----YHNNLHAADVAQTVHYMLCQTGLMNWLSDLEIFATLVAAVVHDFEHTGTTNNFHVMSGSDTALLYNDRAVLENHHISAAFRLIRDEDCNILQNLSRDEFREFRTLVIDMVLATDMSFHFQQLKNMRSLLSLAEPGI----DKSKAASLVLHCC----DISHPAKRWDLHHRWTMSLLDEFFLQGDKERELGLPFSPLCDRNNTLVAESQIGFIDFIVEPSMGVCADMLECILGPLHSSS--KNSTSTSGQEPINEES 458 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8760.17800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8760.17800.1 >prot_L-elsbetiae_contig8760.17800.1 ID=prot_L-elsbetiae_contig8760.17800.1|Name=mRNA_L-elsbetiae_contig8760.17800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=419bp MVEVEQGYGSGKGPGDINVYHNRRHAADVTQAVHYFLKMCNLGQHLEEAEback to top mRNA from alignment at L-elsbetiae_contig8760:125..4437+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8760.17800.1 ID=mRNA_L-elsbetiae_contig8760.17800.1|Name=mRNA_L-elsbetiae_contig8760.17800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4313bp|location=Sequence derived from alignment at L-elsbetiae_contig8760:125..4437+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8760:125..4437+ >mRNA_L-elsbetiae_contig8760.17800.1 ID=mRNA_L-elsbetiae_contig8760.17800.1|Name=mRNA_L-elsbetiae_contig8760.17800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2514bp|location=Sequence derived from alignment at L-elsbetiae_contig8760:125..4437+ (Laminarionema elsbetiae ELsaHSoW15)back to top |