mRNA_L-elsbetiae_contig8744.17775.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8744.17775.1
Unique NamemRNA_L-elsbetiae_contig8744.17775.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 567 bits (1462), Expect = 5.910e-194
Identity = 282/518 (54.44%), Postives = 361/518 (69.69%), Query Frame = 1 
Query:  466 KQLVNSEFTPNTSDIDTALAVLAPTRLIWHQEQAGIIPNSCT--NNAAAPPGGGDHRDEH-GVWESSTWQTFRPDASNSLYWQLYKSNAAYRMALREEKRKGGDFSYDWILRARFDLAWVRPLPPLRSFSRESVWFSRHFWPMSDQFAMVPRAFSDRFFAAITAFYACDGQSWPPPVSWWQSGCR-IGFEESVLFRHLHASEVPYRTYFMFEYVITRGALGGVCYLGEVTFGEACNILSHTGEFRPPFNNQDCSSILAEWADLRCRTLLPAKGMGDARRNDILSTSDPRAWERLVEPSSQ-KPTPPVAVDAAAAEPVIQVGQENQGDRHLENLQYTTVPMAEDIDRVRSELVLLRDSILAPAQPQTEGSTSIFDNFEAKNSSRSSRWDAWQALPPWSVCSSPGCPLAEPQFPGLSPHVITYYTMGKSLLKELAQALRCYVNSLVGKTHEGGSNFDESSCEGISRPLEMVMIDVALQTEELGICTADGTQGLSAMDHVQRFFREPFVACKGYGNMDERQ 2004
            KQ+ N EFTPN+SD++ ALAVL PTRL+WHQ+QAGIIPN C   NN         H   H   WE    Q + P+AS SLYWQLYKS AAYRMALREEKR G  F+YDW++R R D+AW RPLPPLRSFSR++VWF RH+WPMSD FA+VPR FSDRFF+A+  FYACDG+SWPPP SWWQ  C  IGFEESVLFRHLHASE+PYR Y +F+++ITRG +GGVC LG + + E C++L      +PPF+   C   LAE++DLRCRTL PA+GM D RR D +   +PRAWE L++ S   +P P VA           +G+  +GD    ++ YT+V  AED+D  R +LVLLRD++ AP+  +     ++ +  EAK  S   RW  W+  P W + S  GCPLAEPQ PG SPHV+ YYTMG+ L++EL Q+++C+V+ ++G+T  GG + ++SSC G+ R L++VMIDV+L TEELGICTADG+ GLSA + V RFF  P   C GYG +D  +
Sbjct:   50 KQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTDAS---RHSARHLWYWE----QRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALLDSSPLLEPIPAVAAPGP-------LGRATEGDSSDASI-YTSVAKAEDVDSARLKLVLLRDALQAPSPLEPHYEMALRE--EAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGV-RSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRLDSER 549
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 2.000e-62
Identity = 186/609 (30.54%), Postives = 255/609 (41.87%), Query Frame = 1 
Query:  505 DIDTALAVLAPTRLIWHQEQAGIIPNSCTNNAAAPP-GGGDHRDEHGVWESSTWQTFRPDASN--------------------------------SLYWQLYKSNAAYRMALREEKRKGGDFS-----------YDWILRARFDLAWVRPLPPLRSFSRESVWFSRHFWPMSDQFAMVPRAFSDRFFAAITAFYACD---GQSWPPPVSWWQSGCRI------------------------------------------------------GFEESVLFRHLHASEVPYRTYFMFEYVIT-------------RGALGGVCYLGEVTFGEACNILSHTGEFRPPFNNQDCSSILAEWADLRCRTLLPAKGMGDARRNDILSTS---DPRAWERL---VEPSSQKPTPPVAVDAAAAEPVIQVGQENQGDRHLENLQYTTVPMAEDIDRVRSELVLLRDSILAPAQPQTE----GSTSIFDN------FEAKNSSRSSRWDAWQALPP------------WSVCSSPGCPLAEPQFPGLSPHVITYYTMGKSLLKELAQALRCYVNSLV-GKTHEGGSN----FDESSCEGISRPLEMVMIDVALQTEEL 1890
            +I+  +  L+PT+L+WHQEQAGIIPNSC   A  P  GGGD        ESS     RP   N                                  YWQLY+S AAYR+A++ E  K  + +           YDWI+  RFD+AW + LP  R+FSR+ VWF+   WPMS  FA+VPRAFSDRFF+A+ AF+ACD   G SWPP  +WWQ  C                                                        GF ES+++RHLHAS VPYR Y MFEY                 G     C      +   C +L   G F   + +++C++ L+EW+ L CRT    +  G   + +  S +   D   W R    V P   +      + AA A+ V +                      ED+ R    L  LRD+++  A   +E    GS++  +          +N  +    D   A  P            WSV S  GC L E  +PG +PH+I + +     ++ELA A +C  +  + G T     N    FD + C   SR LE+VMIDV+L + E+
Sbjct:  100 NIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSV-PNARPTGGNVGGDNRSNQPRGHASKEPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSENLDPDLTTWPRSSVGVYPDETETDNGDVLGAAEADRVQE----------------------EDLRRAWFNLAALRDAVIVAADDGSEEVMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCAS-SRSLELVMIDVSLHSAEV 682
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 3.780e-60
Identity = 169/577 (29.29%), Postives = 244/577 (42.29%), Query Frame = 1 
Query:  466 KQLVNSEFTPNTSDIDTALAVLAPTRLIWHQEQAGIIPNSCTNNAAAPPGGGDHRDEHGVWESSTWQTFRPDASN--------------------------------SLYWQLYKSNAAYRMALREEKRKGGDFS-----------YDWILRARFDLAWVRPLPPLRSFSRESVWFSRHFWPMSDQFAMVPRAFSDRFFAAITAFYACD---GQSWPPPVSWWQSGCRI------------------------------------------------------GFEESVLFRHLHASEVPYRTYFMFEYV-----ITRGALGGV--------CYLGEVTFGEACNILSHTGEFRPPFNNQDCSSILAEWADLRCRTLLPAKGMGDARRNDILSTS-DP--RAWERLVEPSSQKPTPPVAVDAAAAEPVIQVGQENQGDRHLENLQYTTVPMAEDIDRVRSELVLLRDSILAPAQPQTEGST-----SIFDNFEAKNSSR-----------------SSRWDAWQALPPWSVCSSPGCPLAEPQFPGLSPHVITYYTMGKSLLKELAQALRCYVNSLV 1782
            + L+  +      +I+  +  L+PT+L+WHQEQAGIIPNSC   A  P  GG        + SS     +P   N                                  YWQLY+S AAYR+A++ E  K  + +           YDWI+  RFD+AW   +P LR+FSR+ VWF+   WPMS  FA+VPRAFSDRFF+A+ AF+ACD   G SWPP  +WWQ  C                                                        GF ES+++RHLHAS VPYR Y MFEY      +  G + G         C      +   C +L   G F P + ++ C++ L+EW+ L CR     +     R+ +  S + +P  +AW R             +V  ++ E     G +  G    + +Q       ED+ R  S LV LRD+++  A   +E +T     +  D+   + +SR                 S+     Q    WSV S  GC L E  +PG +PH+I + +     ++ELA A +C  +  +
Sbjct:   86 EDLLEEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSKEPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYYAVPPYVRDGDVDGGAARDTRSGCEASTSDYLTGCVLLGTVGLFSPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYLKAWPRS------------SVGVSSGEAKTHRG-DVFGTAEEDRVQ------EEDLKRAWSNLVALRDAVILAADDDSEEATHGSSNAGEDDTPIREASRRHLGKDDGGDHDAAPKPSNSSPTRQTNRSWSVHSQWGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFM 641
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.900e-8
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1 
Query:  733 MALREEKRKGGDFSYDWILRARFDLAWVRPLPPLRSFSRESVWFSRHFWPMSDQFAMVPRAFSDRFFAAITAFYACDGQSWPPPVSWWQSGCRIGFEESVLFRHLHASEVP 1065
            + LREE+ +  D  Y W++R RFDL+++ PLPPL S SR++V       P+SD FA+VPRA+ D +F A    +      W      +  G   G  E VL   L A+E P
Sbjct:    9 LVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARD--FPKGA--GSTELVLLAALRAAEAP 113
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.610e-8
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1 
Query:  733 MALREEKRKGGDFSYDWILRARFDLAWVRPLPPLRSFSRESVWFSRHFWPMSDQFAMVPRAFSDRFFAAITAFYACDGQSWPPPVSWWQSGCRIGFEESVLFRHLHASEVP 1065
            + LREE+ +  D  Y W++R RFDL+++ PLPPL S SR++V       P+SD FA+VPRA+ D +F A    +      W      +  G   G  E VL   L A+E P
Sbjct:  629 LVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARD--FPKGA--GSTELVLLAALRAAEAP 733
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: A0A0D2W0T8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W0T8_CAPO3)

HSP 1 Score: 58.2 bits (139), Expect = 2.840e-5
Identity = 50/152 (32.89%), Postives = 69/152 (45.39%), Query Frame = 1 
Query:  724 AYRMALREEKRKGGDFSYDWILRARFDLAWVRPLPPLRSFSRESVWF---SRHFWPMSDQFAMVPRAFSDRFFAAITAFYACDGQSWPPPVSWWQSGCRIGFEESVLFRHLHASEVPYRTYFMFEYVITRGALGGVCY--LGEVTFGEACNI 1164
            +Y +AL  E + G  F  DWI+RAR D+ +  PLP L S + ESV+    S H   +S+QFA+VPR FSD F                PPV   +  C    +   L   L A+ +PY  +    + I R   G  C+   G    G  C +
Sbjct:  204 SYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLN-ESVFVPGNSEH--QLSNQFAIVPRKFSDVFLRL-------------PPV---EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCEL 334
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BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Match: UPI0001FE4FEA (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE4FEA)

HSP 1 Score: 58.5 bits (140), Expect = 3.870e-5
Identity = 60/210 (28.57%), Postives = 89/210 (42.38%), Query Frame = 1 
Query:  724 AYRMALREEKRKGGDFSYDWILRARFDLAWVRPLPPLRSFSRESVWF---SRHFWPMSDQFAMVPRAFSDRFFAAITAFYACDGQSWPPPVSWWQSGCRIGFEESVLFRHLHASEVPYRTYFMFEYVITRGALGGVCY--LGEVTFGEACNILSHTGEFRPPFNNQDCSSILAEWADLRCRTLLPAKGMGDARRNDILSTSDPRAWERLV 1338
            +Y +AL  E + G  F  DWI+RAR D+ +  PLP L S + ESV+    S H   +S+QFA+VPR FSD F                PPV   +  C    +   L   L A+ +PY  +    + I R   G  C+   G    G  C +             + C ++  E  + R    L A+ +    +      S+ +AW+R V
Sbjct:  204 SYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLN-ESVFVPGNSEH--QLSNQFAIVPRKFSDVFLRL-------------PPV---EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCEL------------RKVCEAMFGEITNDRKSKKLDAQLLISELKTPHAGCSN-KAWKRAV 379
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8744.17775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FK46_ECTSI5.910e-19454.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5E2_ECTSI2.000e-6230.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ6_9PHAE3.780e-6029.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WMN0_9STRA1.900e-838.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WLT0_9STRA5.610e-838.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0D2W0T8_CAPO32.840e-532.89Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
UPI0001FE4FEA3.870e-528.57hypothetical protein n=1 Tax=Capsaspora owczarzaki... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8744contigL-elsbetiae_contig8744:813..5636 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.4
Seed ortholog evalue2.8e-58
Seed eggNOG ortholog2880.D7G5E2
Hectar predicted targeting categoryother localisation
EggNOG OGs2CY2I@1,2S1H1@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2007
Cds size1830
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8744.17775.1prot_L-elsbetiae_contig8744.17775.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8744 813..5459 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816954.566679-CDS-L-elsbetiae_contig8744:812..9321622816954.566679-CDS-L-elsbetiae_contig8744:812..932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 813..932 -
1691683938.652867-CDS-L-elsbetiae_contig8744:812..9321691683938.652867-CDS-L-elsbetiae_contig8744:812..932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 813..932 -
1622816954.577727-CDS-L-elsbetiae_contig8744:1328..13771622816954.577727-CDS-L-elsbetiae_contig8744:1328..1377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 1329..1377 -
1691683938.6658201-CDS-L-elsbetiae_contig8744:1328..13771691683938.6658201-CDS-L-elsbetiae_contig8744:1328..1377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 1329..1377 -
1622816954.5877078-CDS-L-elsbetiae_contig8744:1642..18061622816954.5877078-CDS-L-elsbetiae_contig8744:1642..1806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 1643..1806 -
1691683938.6775475-CDS-L-elsbetiae_contig8744:1642..18061691683938.6775475-CDS-L-elsbetiae_contig8744:1642..1806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 1643..1806 -
1622816954.599146-CDS-L-elsbetiae_contig8744:2016..24881622816954.599146-CDS-L-elsbetiae_contig8744:2016..2488Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 2017..2488 -
1691683938.6892745-CDS-L-elsbetiae_contig8744:2016..24881691683938.6892745-CDS-L-elsbetiae_contig8744:2016..2488Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 2017..2488 -
1622816954.6098719-CDS-L-elsbetiae_contig8744:3147..34711622816954.6098719-CDS-L-elsbetiae_contig8744:3147..3471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 3148..3471 -
1691683938.7007976-CDS-L-elsbetiae_contig8744:3147..34711691683938.7007976-CDS-L-elsbetiae_contig8744:3147..3471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 3148..3471 -
1622816954.6225772-CDS-L-elsbetiae_contig8744:3873..40851622816954.6225772-CDS-L-elsbetiae_contig8744:3873..4085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 3874..4085 -
1691683938.714042-CDS-L-elsbetiae_contig8744:3873..40851691683938.714042-CDS-L-elsbetiae_contig8744:3873..4085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 3874..4085 -
1622816954.637739-CDS-L-elsbetiae_contig8744:4970..54591622816954.637739-CDS-L-elsbetiae_contig8744:4970..5459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 4971..5459 -
1691683938.7258966-CDS-L-elsbetiae_contig8744:4970..54591691683938.7258966-CDS-L-elsbetiae_contig8744:4970..5459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8744 4971..5459 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816954.648153-UTR-L-elsbetiae_contig8744:5459..56361622816954.648153-UTR-L-elsbetiae_contig8744:5459..5636Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8744 5460..5636 -
1691683938.7360835-UTR-L-elsbetiae_contig8744:5459..56361691683938.7360835-UTR-L-elsbetiae_contig8744:5459..5636Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8744 5460..5636 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8744.17775.1

>prot_L-elsbetiae_contig8744.17775.1 ID=prot_L-elsbetiae_contig8744.17775.1|Name=mRNA_L-elsbetiae_contig8744.17775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=610bp
MHSLRQRWVGGREWVSPQVHRWSYSLTCPPKQQNSERPVIFHRCTLLTMT
LSLSYMTSLSSCLVQDFICHSWGTVAIYSCAVITPDASHTRTHCNQKQLV
NSEFTPNTSDIDTALAVLAPTRLIWHQEQAGIIPNSCTNNAAAPPGGGDH
RDEHGVWESSTWQTFRPDASNSLYWQLYKSNAAYRMALREEKRKGGDFSY
DWILRARFDLAWVRPLPPLRSFSRESVWFSRHFWPMSDQFAMVPRAFSDR
FFAAITAFYACDGQSWPPPVSWWQSGCRIGFEESVLFRHLHASEVPYRTY
FMFEYVITRGALGGVCYLGEVTFGEACNILSHTGEFRPPFNNQDCSSILA
EWADLRCRTLLPAKGMGDARRNDILSTSDPRAWERLVEPSSQKPTPPVAV
DAAAAEPVIQVGQENQGDRHLENLQYTTVPMAEDIDRVRSELVLLRDSIL
APAQPQTEGSTSIFDNFEAKNSSRSSRWDAWQALPPWSVCSSPGCPLAEP
QFPGLSPHVITYYTMGKSLLKELAQALRCYVNSLVGKTHEGGSNFDESSC
EGISRPLEMVMIDVALQTEELGICTADGTQGLSAMDHVQRFFREPFVACK
GYGNMDERQ*
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mRNA from alignment at L-elsbetiae_contig8744:813..5636-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8744.17775.1 ID=mRNA_L-elsbetiae_contig8744.17775.1|Name=mRNA_L-elsbetiae_contig8744.17775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4824bp|location=Sequence derived from alignment at L-elsbetiae_contig8744:813..5636- (Laminarionema elsbetiae ELsaHSoW15)
GAAAAAGTCTTCCTCTCTGTCAACCTGTAGCAATCTAGTGATTTGAACTT
CTTCAAGAGCGTCCATCTCCCCACGCCAAGGCGACGATAGATGTGTACAT
AGGTAAGTCATACGTAGAAGTCTATCTAGATATATATATGTATCTAGTCT
ATCTCCCCCGCGTGCTTTCTCCCACCCATGCATAGTCTACGGCAGCGATG
GGTCGGGGGCAGAGAGTGGGTGAGCCCCCAAGTACACAGGTGGAGTTACA
GTCTCACTTGCCCGCCCAAGCAACAAAACTCTGAGAGGCCGGTGATATTC
CACCGATGCACATTGTTAACAATGACGTTGAGCCTCTCATACATGACTTC
CCTTTCCAGTTGTCTGGTGCAGGATTTTATCTGCCACTCGTGGGGCACTG
TTGCAATCTATTCATGTGCGGTCATCACACCGGACGCGTCTCACACACGT
ACACATTGTAATCAAAAACAGTTGGTGAACTCCGAGTTCACGCCGAACAC
TTCAGACATCGACACCGCGTTAGCGGTCCTCGCACCAACCAGGCTTATTT
GGCATCAGGAACAAGCAGGGATCATCCCCAACTCTTGTACTAATAATGCA
GCAGCACCGCCAGGAGGTGGTGACCACCGCGATGAACACGGTGTTTGGGA
ATCATCCACGTGGCAGGTGAATCAGCCCGAAGTTAGAAACATAACACCTG
TGTGCAAAAGCACGGAAAAAAGTGGCCTGGCACTTTTTGCGCATCGTTTT
TGTCAACAAATGGTGAGTCGCCGATTTTTGACGTGTTTGAGTTTTCGCCT
GTCTGTGTGACACGCGGCCCGGCTCGATTTCCAGTCAACTGGTTCCAGCT
TGCAGATCGCCACAAGAAGCTCACGCAATGCTTATATTTCTTACGCGCAC
GGATCCACATTATTTTGAGTCCAAAGCTTCTCCGTTGCCGAGTTTGCTCT
GACAAAAAAATGTGTGCGAGAGGGTCCCCGCCGAGCGAGTGAAGGTGTTT
TCACCGCTGTGCACCGCACCGAAGAGATCGAGATTGAGCGCGAGATATTG
TACGAAGTAAGGACTGGTTATTTCCGGCCACCACCAGAAGAGGAGATCGT
TTGCTTCAGTAGGGAGGTAGATATCCAACAACCGGCGGCATCTTTCGGGC
GGCGTTTTGGATTTTTGATTTTGATCTGGTGTGTCGGCACACTCAAGACG
CCCTCAACTCGACGAGGTGAGCCGCAAGACATCGTGCCCCTGGGCCGGGA
TGGTTACGGGCGATCACCAGGGCAAGCAGACGGCCTGAGGTTTCTTGAGC
TTAGAGAAAATCGGCGGGATCAAGACTTTTGCTTCGTAGATTTTGCTTCC
TAGATTCTGCGTCGTAGATTTTCCTTCAGACTGACACTATGGTCTGGGCT
TCCTGAGATAGAGACCAATTTCGAGAATTGAAACCACCCTTGTTTCGTAC
CATGCCGCTGACTCCTCTTCCACCAGCAAATTGTCACGCGAAACCAACTT
TTGGAACTGGTAGCCAATTCTGATGTTTGTGATCACTCTTGGTTCCGGCA
GACGTTCAGGCCCGACGCCAGCAATAGTCTCTACTGGCAATTGTACAAGT
CCAACGCCGCCTACCGAATGGCCCTCCGGGAAGAGAAGCGAAAGGGTGGC
GACTTCTCGTATGACTGGATCCTACGTGCCCGCTTCGACCTGGCCTGGGT
TCGTCCCCTGCCACCGCTGCGATCGTTTTCTCGGGAATCGGTGTGGTTCA
GCCGTCACTTCTGGTGAGGCCGCGATGAGCGTAATATCTCGATTTATAGA
GAGTCCCAGCGTGTGTTTTTGAAGCGAGGTGGAGATGAAGGGCCTTTCTA
CGCATATCCTCTGTACAGGGACCGTATCGGATGCTGCAGCCCTCCTTCTT
GCTGCATGTGCAGAGGTTGCACTCCAGAAATCGTCCACAGTGTTGCCATA
CTACAACATCGCGACACATCAGAGTAATTCGTCATACCCCTTTGTACTAC
ATACAAATAAATGTCCATCTCACGGAACGGTGCACGACGAAAACATGCAT
ACACAGCATGCCGTCCTCCCTTGAGTGTACACAAAGTATATAGGTACTGC
AAGAGGTTCCTGACGCCACTCTTTTTGCCCGCACGATAATCTTCCATGCT
TCGCCCGGCGTGGAGGCCTATGTCGGATCAGTTCGCCATGGTACCTCGGG
CCTTCTCCGACCGTTTTTTCGCGGCCATAACAGCCTTCTATGCGTGTGAT
GGCCAGTCGTGGCCACCCCCGGTATCATGGTGGCAGTCCGGTTGCCGGAT
CGGGTTCGAGGAAAGCGTGCTTTTTCGGCACCTTCACGCGTCAGAAGTTC
CGTATCGGACTTACTTTATGTTTGAGTACGTCATCACACGAGGGGCACTC
GGAGGGGTATGCTACCTGGGAGAAGTCACGTTCGGCGAAGCTTGCAATAT
ACTCTCGCATACCGGGGAGTTTCGGCCTCCCTTCAACAAGTACGTGTTCG
TACAGTAGCAATGCTCATCAATTGTTGCCTTGAATGCGATCGACGGGCTG
ACGTCGGTAGTAGATGATAAAAATAACCTGTCATTGTTTGACTGTCGAGC
AATCAAATCCGCTCTTTTAGTCTATAGCAGGAATTTCCGTGTTGGAAATT
TTGTCCAATGTTTTTTTTTACCTCTTTCTCGCATAAGATAACCCTCTACG
GGGGGCGTATGCATGTCAGAAAATTCCGAGTGACGCGCACGATCGTGCGC
CCCGGTTGCTTAGATACGAAAACCTCGCAAGTAACGAAAGAGCAACCCCT
GTTCGAAAGTTGTAGATCGAAAGCAGGACGGGAAGGAACTTTTTTATGAT
GCACCGGAAGGCAGCAACAGTCATGCTTGTTTTTTATCGGTGATGTACAT
GACATGGATACCGGCTAGCCTGGAGCACTCGCGCATTCTTGCCAACTAGC
ATCGATCCGCTTCCGTACCCTTCTCTCACATGATGAGTATCGACCCATGT
CAGTAAGATCGGCAGGCTGATTGTCCATGCGCAACCAAGTTCTCATGTAC
GTCATCTCCCTCAAGCATAAGTCCGGAAACGGTGATCCCCAAGCTACCCC
TACTGAGTTTTCTACTCCGTGTCGCCCCCATCCATTCCCCCGAAACAGTC
AGGACTGCAGCAGCATTCTCGCGGAATGGGCGGACCTTCGTTGCCGGACC
CTCCTCCCCGCAAAGGGCATGGGCGATGCCCGCAGAAATGACATACTATC
GACGTCGGATCCTCGAGCTTGGGAGCGGTTGGTTGAACCTTCGTCGCAGA
AACCCACACCACCTGTAGCTGTGGATGCGGCGGCGGCAGAGCCAGTCATA
CAAGTCGGGCAAGAAAACCAAGGCGATCGTCATTTGGAAAACCTCCAGTA
CACCACCGTTCCTATGGCGGAAGACATTGACCGTGTGCGTTCTGAGCTGG
TCCTCCTGAGGGATTCAATACTGGCGCCTGCGCAGCCTCAAACTGAGGGC
AGCACATCAATATTCGACAACTTTGAAGCCAAGAATTCTAGCCGCTCGAG
CCGGTGGGACGCGTGGCAGGCGCTGCCACCGTGGTCGGTGTGCTCAAGCC
CTGGATGTCCTCTTGCGGAGGTGGGGCAATAATGGTTGAATTTCGTCCTT
GTGAGTGTTGCAGGTGTTCGTGTACATTAGTCAAGCTCGTGTTTTGGTAG
GGTTGTATGCTGTAATTTACCTGGACAGGTGATGAGTGGCATGTTCCAAA
TGGACACAACGATTATGTTGTTTTCAAGGTTGTAATCGCATCCCCTTCGT
CCGCACCGCCGTTGTTCCTTGTGCCACTAGCCGCAGTTTCCAGGTCTTTC
GCCGCATGTCATCACGTACTACACCATGGGAAAATCTCTATTGAAAGAGC
TGGCTCAAGCGCTTCGGTGTTATGTAAATAGCTTAGTTGGGAAGACTCAC
GAAGGCGGAAGTAACTTCGACGAGAGCTCGTGCGAGGGAATCAGGTGAAC
ACCAAACTTGATGAGAGCTGAAAATATGCCACCTGGAAAGAAGATTATAG
CTAGTGCTGAAGGGGGAAAGACGCCACAGTAGAGTAACCTAATATGTACC
GCGTACCCATACCGCGTACCTCGTACGTGCTACAAATTTTGCTTTTGAAT
CTCTTCACATTCAAGAACCTACCTGCATTGAATGCACCTCCTTTTTCTCC
GCGTGGCCCTCTCCCCCCCGGGTCTATGGTATTTGGTCTGGATCGTCATG
CTGGGAAAGCAGACCGCTAGAGATGGTCATGATCGACGTTGCTCTCCAAA
CGGAAGAGGTGGGTGTTCGTGAATTTAGTGTCGGTACTAAAACTCATTGC
CTCGACCACACAGGCGAGGAGCTGTCACCTAAACTAACGAGTGAGGCCCA
AAACTTTCCATGTTACACTCTAAAGTAGTGGGTTTTCCCAAATTTCTCCC
AAGCGAAGTTTTGTTTAGAAGAGCATTATCTTCCTTTGGGGGTGGCACTC
AGTGCTTTCACTCTCTCTTCGCCCTGCGACGGCTTCAAACTGCCTGGCGC
ATCTACCATGCTCAGAGTATGAATCCATAACACCACCAAAACAAGCCTTT
CGGGCATCTACTTGAAACCAAGAGCAGATCCCTACCGTGTACACGTGTGT
CACGCCGCCCAACTTCCTCTGCCTTCATGATCTCGTTAAAATGTATGGGA
CCAGCTCGGCATCTGCACTGCGGACGGTACTCAGGGGTTGAGTGCCATGG
ATCATGTTCAGCGGTTCTTTCGGGAGCCTTTTGTCGCCTGCAAGGGATAC
GGCAACATGGACGAACGGCAATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8744:813..5636-

>mRNA_L-elsbetiae_contig8744.17775.1 ID=mRNA_L-elsbetiae_contig8744.17775.1|Name=mRNA_L-elsbetiae_contig8744.17775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3660bp|location=Sequence derived from alignment at L-elsbetiae_contig8744:813..5636- (Laminarionema elsbetiae ELsaHSoW15)
ATGCATAGTCTACGGCAGCGATGGGTCGGGGGCAGAGAGTGGGTGAGCCC
CCAAGTACACAGGTGGAGTTACAGTCTCACTTGCCCGCCCAAGCAACAAA
ACTCTGAGAGGCCGGTGATATTCCACCGATGCACATTGTTAACAATGACG
TTGAGCCTCTCATACATGACTTCCCTTTCCAGTTGTCTGGTGCAGGATTT
TATCTGCCACTCGTGGGGCACTGTTGCAATCTATTCATGTGCGGTCATCA
CACCGGACGCGTCTCACACACGTACACATTGTAATCAAAAACAGTTGGTG
AACTCCGAGTTCACGCCGAACACTTCAGACATCGACACCGCGTTAGCGGT
CCTCGCACCAACCAGGCTTATTTGGCATCAGGAACAAGCAGGGATCATCC
CCAACTCTTGTACTAATAATGCAGCAGCACCGCCAGGAGGTGGTGACCAC
CGCGATGAACACGGTGTTTGGGAATCATCCACGTGGCAGATGCATAGTCT
ACGGCAGCGATGGGTCGGGGGCAGAGAGTGGGTGAGCCCCCAAGTACACA
GGTGGAGTTACAGTCTCACTTGCCCGCCCAAGCAACAAAACTCTGAGAGG
CCGGTGATATTCCACCGATGCACATTGTTAACAATGACGTTGAGCCTCTC
ATACATGACTTCCCTTTCCAGTTGTCTGGTGCAGGATTTTATCTGCCACT
CGTGGGGCACTGTTGCAATCTATTCATGTGCGGTCATCACACCGGACGCG
TCTCACACACGTACACATTGTAATCAAAAACAGTTGGTGAACTCCGAGTT
CACGCCGAACACTTCAGACATCGACACCGCGTTAGCGGTCCTCGCACCAA
CCAGGCTTATTTGGCATCAGGAACAAGCAGGGATCATCCCCAACTCTTGT
ACTAATAATGCAGCAGCACCGCCAGGAGGTGGTGACCACCGCGATGAACA
CGGTGTTTGGGAATCATCCACGTGGCAGACGTTCAGGCCCGACGCCAGCA
ATAGTCTCTACTGGCAATTGTACAAGTCCAACGCCGCCTACCGAATGGCC
CTCCGGGAAGAGAAGCGAAAGGGTGGCGACTTCTCGTATGACTGGATCCT
ACGTGCCCGCTTCGACCTGGCCTGGGTTCGTCCCCTGCCACCGCTGCGAT
CGTTTTCTCGGGAATCGGTGTGGTTCAGCCGTCACTTCTGACGTTCAGGC
CCGACGCCAGCAATAGTCTCTACTGGCAATTGTACAAGTCCAACGCCGCC
TACCGAATGGCCCTCCGGGAAGAGAAGCGAAAGGGTGGCGACTTCTCGTA
TGACTGGATCCTACGTGCCCGCTTCGACCTGGCCTGGGTTCGTCCCCTGC
CACCGCTGCGATCGTTTTCTCGGGAATCGGTGTGGTTCAGCCGTCACTTC
TGGCCTATGTCGGATCAGTTCGCCATGGTACCTCGGGCCTTCTCCGACCG
TTTTTTCGCGGCCATAACAGCCTTCTATGCGTGTGATGGCCAGTCGTGGC
CACCCCCGGTATCATGGTGGCAGTCCGGTTGCCGGATCGGGTTCGAGGAA
AGCGTGCTTTTTCGGCACCTTCACGCGTCAGAAGTTCCGTATCGGACTTA
CTTTATGTTTGAGTACGTCATCACACGAGGGGCACTCGGAGGGGTATGCT
ACCTGGGAGAAGTCACGTTCGGCGAAGCTTGCAATATACTCTCGCATACC
GGGGAGTTTCGGCCTCCCTTCAACAAGCCTATGTCGGATCAGTTCGCCAT
GGTACCTCGGGCCTTCTCCGACCGTTTTTTCGCGGCCATAACAGCCTTCT
ATGCGTGTGATGGCCAGTCGTGGCCACCCCCGGTATCATGGTGGCAGTCC
GGTTGCCGGATCGGGTTCGAGGAAAGCGTGCTTTTTCGGCACCTTCACGC
GTCAGAAGTTCCGTATCGGACTTACTTTATGTTTGAGTACGTCATCACAC
GAGGGGCACTCGGAGGGGTATGCTACCTGGGAGAAGTCACGTTCGGCGAA
GCTTGCAATATACTCTCGCATACCGGGGAGTTTCGGCCTCCCTTCAACAA
TCAGGACTGCAGCAGCATTCTCGCGGAATGGGCGGACCTTCGTTGCCGGA
CCCTCCTCCCCGCAAAGGGCATGGGCGATGCCCGCAGAAATGACATACTA
TCGACGTCGGATCCTCGAGCTTGGGAGCGGTTGGTTGAACCTTCGTCGCA
GAAACCCACACCACCTGTAGCTGTGGATGCGGCGGCGGCAGAGCCAGTCA
TACAAGTCGGGCAAGAAAACCAAGGCGATCGTCATTTGGAAAACCTCCAG
TACACCACCGTTCCTATGGCGGAAGACATTGACCGTGTGCGTTCTGAGCT
GGTCCTCCTGAGGGATTCAATACTGGCGCCTGCGCAGCCTCAAACTGAGG
GCAGCACATCAATATTCGACAACTTTGAAGCCAAGAATTCTAGCCGCTCG
AGCCGGTGGGACGCGTGGCAGGCGCTGCCACCGTGGTCGGTGTGCTCAAG
CCCTGGATGTCCTCTTGCGGAGTCAGGACTGCAGCAGCATTCTCGCGGAA
TGGGCGGACCTTCGTTGCCGGACCCTCCTCCCCGCAAAGGGCATGGGCGA
TGCCCGCAGAAATGACATACTATCGACGTCGGATCCTCGAGCTTGGGAGC
GGTTGGTTGAACCTTCGTCGCAGAAACCCACACCACCTGTAGCTGTGGAT
GCGGCGGCGGCAGAGCCAGTCATACAAGTCGGGCAAGAAAACCAAGGCGA
TCGTCATTTGGAAAACCTCCAGTACACCACCGTTCCTATGGCGGAAGACA
TTGACCGTGTGCGTTCTGAGCTGGTCCTCCTGAGGGATTCAATACTGGCG
CCTGCGCAGCCTCAAACTGAGGGCAGCACATCAATATTCGACAACTTTGA
AGCCAAGAATTCTAGCCGCTCGAGCCGGTGGGACGCGTGGCAGGCGCTGC
CACCGTGGTCGGTGTGCTCAAGCCCTGGATGTCCTCTTGCGGAGCCGCAG
TTTCCAGGTCTTTCGCCGCATGTCATCACGTACTACACCATGGGAAAATC
TCTATTGAAAGAGCTGGCTCAAGCGCTTCGGTGTTATGTAAATAGCTTAG
TTGGGAAGACTCACGAAGGCGGAAGTAACTTCGACGAGAGCTCGTGCGAG
GGAATCAGCCGCAGTTTCCAGGTCTTTCGCCGCATGTCATCACGTACTAC
ACCATGGGAAAATCTCTATTGAAAGAGCTGGCTCAAGCGCTTCGGTGTTA
TGTAAATAGCTTAGTTGGGAAGACTCACGAAGGCGGAAGTAACTTCGACG
AGAGCTCGTGCGAGGGAATCAGCAGACCGCTAGAGATGGTCATGATCGAC
GTTGCTCTCCAAACGGAAGAGCAGACCGCTAGAGATGGTCATGATCGACG
TTGCTCTCCAAACGGAAGAGCTCGGCATCTGCACTGCGGACGGTACTCAG
GGGTTGAGTGCCATGGATCATGTTCAGCGGTTCTTTCGGGAGCCTTTTGT
CGCCTGCAAGGGATACGGCAACATGGACGAACGGCAATAACTCGGCATCT
GCACTGCGGACGGTACTCAGGGGTTGAGTGCCATGGATCATGTTCAGCGG
TTCTTTCGGGAGCCTTTTGTCGCCTGCAAGGGATACGGCAACATGGACGA
ACGGCAATAA
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