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Homology
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: D8LDI0_ECTSI (Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI0_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 3.260e-133 Identity = 207/225 (92.00%), Postives = 218/225 (96.89%), Query Frame = 1
Query: 22 ELRTRGKRLEAQGDEEEHAARLEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETSGH 696
ELRTR KR+EA G EEEHAA+LEK A+ LELS K+Q+QKK+LI+NAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCREL+DH KIMEKIEKGEKRIFRSKQIRSAIDSKV+RHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELET+G+
Sbjct: 814 ELRTRCKRMEAHGGEEEHAAQLEKTASGLELSSKEQDQKKKLIDNAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELADHPKIMEKIEKGEKRIFRSKQIRSAIDSKVSRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETTGN 1038
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE) HSP 1 Score: 412 bits (1059), Expect = 3.300e-133 Identity = 208/225 (92.44%), Postives = 218/225 (96.89%), Query Frame = 1
Query: 22 ELRTRGKRLEAQGDEEEHAARLEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETSGH 696
ELRTR KR+EAQG EEE AA+LEK AN LELS K+QEQKK+LI+NAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCREL+DH KIMEKIEKGEKRIFRSKQIRSAIDSKV+RH+NPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELET+G+
Sbjct: 848 ELRTRCKRMEAQGGEEEQAAQLEKTANGLELSSKEQEQKKKLIDNAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELADHPKIMEKIEKGEKRIFRSKQIRSAIDSKVSRHSNPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETTGN 1072
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A7S1XXH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXH0_9STRA) HSP 1 Score: 249 bits (635), Expect = 7.910e-79 Identity = 113/199 (56.78%), Postives = 160/199 (80.40%), Query Frame = 1
Query: 94 EANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETS 690
E EL + + +K++L+E +FG W +KDF+AFVAA ERHGR+D +A+VRDV LET K E+++ +Y + FW+R EL +H K++E+IEKGE+RI R K IR+A+++KV RH +PW +T++Y GGKGK++T EED FL+NMMHR+GYG WE IR+E+R+AWQFRFDW+FKSR+A E+QRR + L+R +EKENEE+E++
Sbjct: 61 EEGKFELPDELKAEKQQLVEASFGHWTKKDFKAFVAAMERHGREDVDAIVRDVTLETGKAEDDIARYYRTFWERYEELPEHPKLLERIEKGERRIARMKSIRAALEAKVGRHPDPWRLMTLDYNGGKGKMYTLEEDVFLINMMHRHGYGEWERIRLEVRRAWQFRFDWYFKSRSAPEIQRRCEQLVRFIEKENEEIESA 259
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A835ZE29_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE29_9STRA) HSP 1 Score: 263 bits (672), Expect = 9.390e-78 Identity = 128/196 (65.31%), Postives = 157/196 (80.10%), Query Frame = 1
Query: 103 ALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETS 690
AL LS KD KKRLI +AF DW RKD R FVAA ER+GR D + VVR+V ++T K +E++ +Y VF KRC ELSDH K+MEKIE+GE+RI RSK+I+ A++ KV RH +PW L I+Y KGK +TEEEDAFL+NMMHRYGYGNWEVIR +I+KAWQF FDWFFKSRNAAELQ+RGD LI++VEKENEE++ +
Sbjct: 750 ALVLSDKDAADKKRLIADAFPDWTRKDARTFVAALERNGRGDRDQVVREVAIDTGKPDEDIVRYFNVFLKRCHELSDHAKVMEKIERGERRIQRSKEIKVALEKKVQRHQSPWQHLPISYGSTKGKTYTEEEDAFLINMMHRYGYGNWEVIRTQIKKAWQFHFDWFFKSRNAAELQKRGDYLIKVVEKENEEIDAA 945
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A6U0WH08_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WH08_9STRA) HSP 1 Score: 254 bits (648), Expect = 5.400e-74 Identity = 121/207 (58.45%), Postives = 160/207 (77.29%), Query Frame = 1
Query: 85 LEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETSGHGGK 705
+E E ELS + +++K+ LIE +FG W +KDF++FV+A ERHGR+D + +VR+V LET KTEE++ +Y FW R EL +H KI+E+IEKGE+RI R K+I+ A+D KV RH +PW ++INY G KGK++T EED FL+NMMHR+GYG WE IR+EIR+AWQFRFDW+FKSRN E+QRR DTLIR++EKENEE E S G+
Sbjct: 873 MELEEGDYELSDELRQEKQELIEESFGHWTKKDFKSFVSAMERHGREDVDLIVREVSLETGKTEEDIARYYTTFWTRYEELPEHPKILERIEKGERRIARLKEIKHALDVKVARHPDPWRLMSINYNGNKGKMYTLEEDVFLINMMHRHGYGEWERIRLEIRRAWQFRFDWYFKSRNVNEIQRRCDTLIRVIEKENEEFEGSDSRGR 1079
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: F0YAG6_AURAN (Uncharacterized protein RUV1 n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG6_AURAN) HSP 1 Score: 246 bits (629), Expect = 1.260e-71 Identity = 129/226 (57.08%), Postives = 164/226 (72.57%), Query Frame = 1
Query: 1 MSCLVEQELRTRGKRLEAQGDEEEHAARLEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEE 678
+ L+ +E GK+ EA+ DE E A LE A EL K+ +K+RL++ FGDW RKD RAF+ A ERHGR D +AV R+ ET KT+ +VR+Y FWK+ ++++D ++++K+EKGEKR+ RS++IRSA+ KV RH PW L INY +GKV+TEEEDAFL+NMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA EL RR D LIRLVEKENE+
Sbjct: 732 LEVLLAKEDELAGKKHEARADEME--ATLE---TAYELPVKEAVRKERLLKEGFGDWTRKDLRAFLNAMERHGRGDVDAVARETANETGKTDADVRRYHATFWKKHKDIADWERLVDKVEKGEKRLQRSQEIRSALADKVARHPKPWECLPINYGASRGKVWTEEEDAFLVNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNAQELNRRADLLIRLVEKENED 952
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A7S2SFZ0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFZ0_9STRA) HSP 1 Score: 238 bits (608), Expect = 1.890e-68 Identity = 126/229 (55.02%), Postives = 168/229 (73.36%), Query Frame = 1
Query: 22 ELRTRGKRLEAQGDEEEHAA---RLEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRE-LSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGG-----KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEEL 681
ELRTR R + DEE+ +A RLE E ++LS ++Q K +L+E FGDW RKDF+ FVAA E+HGR+DT+ V R V ET K E V +Y VFWK+ + L+D K++EKIE+GEK+I R ++IR A++SKV+R+ P+ LT+NY G +GK++TEEEDAFL+ MMHR+GYG W+ IR EIR+AWQF+FDWFFKSRN++ELQRR D L+R +E+ENEEL
Sbjct: 826 ELRTRASREQWGSDEEDPSAIADRLENETQTMQLSDREQATKTKLLEEGFGDWTRKDFKCFVAALEQHGREDTDNVFRQVGAETGKPETEVERYYGVFWKKGEKCLADWAKVVEKIERGEKKIARHQEIRDALESKVSRYEVPFMQLTMNYGAGGAGGARGKIWTEEEDAFLVCMMHRHGYGQWDRIRQEIRRAWQFKFDWFFKSRNSSELQRRCDILLRCIERENEEL 1054
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A2R5GCY8_9STRA (ISWI chromatin-remodeling complex ATPase CHR11 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCY8_9STRA) HSP 1 Score: 237 bits (605), Expect = 7.690e-68 Identity = 116/220 (52.73%), Postives = 156/220 (70.91%), Query Frame = 1
Query: 49 EAQGDEEEHAARLEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETSGHGGKK 708
EA+GD++ + RLE+E +ELS ++QE+K++LI FG WNR+DFRA+ +A ERHGRD + ++ DV T K + +R Y FW+R +E+SDH +I+++I+KGE+++ R I A+D KV R NPW LTINY KGK F+EEED FL+ M+ R GYG W+ ++ EIRKAW FRFDWFFKSR AAELQRR DTL+RL+EKE EE GK+
Sbjct: 911 EAEGDKKPLSERLEEELATMELSAEEQEEKEKLISEGFGSWNRRDFRAYTSACERHGRDARDDILADVAEATGKPKTEIRDYHDTFWRRYKEISDHERIIDRIKKGEQKLARRAAITEALDKKVARTKNPWQALTINYGSNKGKTFSEEEDRFLVCMLQRLGYGAWDQLKQEIRKAWNFRFDWFFKSRTAAELQRRADTLVRLIEKELEEETKKSEAGKR 1130
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A7S2BNI9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNI9_9STRA) HSP 1 Score: 230 bits (586), Expect = 3.670e-67 Identity = 117/206 (56.80%), Postives = 156/206 (75.73%), Query Frame = 1
Query: 76 AARLEKEANALELSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCR-ELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYY----GGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEE 678
A RLE E + L+ KD K +L+E FGDW RKD+RA++ A E+ GRDD E+VVR V ET+K E V +Y VFWK+ +LSD KI+EKIEKGEK+I R+++IR A+++KV R+A P+ LT+++ G +GK+++EEEDA+L+ MMHR+GYG WE IR EIR+AWQF+FDWFFKSR+AA+LQRRGD L+R +EKENEE
Sbjct: 422 ADRLEAELPNICLADKDANAKAKLMEEGFGDWTRKDYRAYLQALEQFGRDDVESVVRQVAAETSKPEAAVERYNGVFWKKASSQLSDWSKIIEKIEKGEKKIARNREIREALETKVNRYAQPFQQLTVSFAASSGGARGKIWSEEEDAYLVCMMHRHGYGQWERIRQEIRRAWQFKFDWFFKSRSAADLQRRGDVLLRCIEKENEE 627
BLAST of mRNA_L-elsbetiae_contig8734.17764.1 vs. uniprot
Match: A0A7S3PML4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PML4_9STRA) HSP 1 Score: 234 bits (597), Expect = 5.360e-67 Identity = 123/226 (54.42%), Postives = 157/226 (69.47%), Query Frame = 1
Query: 34 RGKRLEAQGDEEEHAARLEKEANALE-------LSPKDQEQKKRLIENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDLTINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETS 690
RGK E Q D ++ A + ++E LE L+ ++QE+K RL+E AFGDWNR+DFRA+ A ERHGR D +A++ DV T KT+E+VR Y FW+R +EL D K +++I+KGE ++ R I A+ SKV R NPW LT+NY KGK FTEEED FL+ MM+R GYG W+ ++ EIRKAW FRFDWFFKSR AELQRR DTL+RLVEKENEE+ S
Sbjct: 807 RGKFGEVQEDTDDAAKKAKEELEKLEAKLDDFQLTEEEQEEKDRLVEEAFGDWNRRDFRAYTQACERHGRKDIKAIIADVVDATGKTKEDVRAYHNTFWERYKELQDWEKTIDRIKKGEHKLKRKHAIAEALRSKVERTTNPWQTLTLNYGSNKGKTFTEEEDRFLVCMMNRLGYGAWDQLKQEIRKAWNFRFDWFFKSRTTAELQRRCDTLVRLVEKENEEMSGS 1032
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 414.5 |
Seed ortholog evalue | 3.9e-113 |
Seed eggNOG ortholog | 2880.D8LDI0 |
Preferred name | SMARCA5 |
KEGG ko | ko:K11654,ko:K11727 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000122,GO:0000166,GO:0000182,GO:0000183,GO:0000228,GO:0000733,GO:0000785,GO:0000790,GO:0000793,GO:0000819,GO:0000981,GO:0001067,GO:0001178,GO:0001410,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005677,GO:0005694,GO:0005700,GO:0005730,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006363,GO:0006366,GO:0006369,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007062,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007338,GO:0007399,GO:0007417,GO:0007420,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008623,GO:0009058,GO:0009059,GO:0009373,GO:0009553,GO:0009561,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0014070,GO:0015616,GO:0016043,GO:0016070,GO:0016458,GO:0016462,GO:0016584,GO:0016587,GO:0016589,GO:0016590,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017053,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019236,GO:0019237,GO:0019438,GO:0019953,GO:0019954,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030182,GO:0030435,GO:0030436,GO:0030447,GO:0030518,GO:0030522,GO:0030554,GO:0030575,GO:0030874,GO:0031010,GO:0031055,GO:0031213,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032870,GO:0032991,GO:0033043,GO:0033044,GO:0033993,GO:0034080,GO:0034097,GO:0034401,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035039,GO:0035041,GO:0035063,GO:0035075,GO:0035076,GO:0035092,GO:0035639,GO:0035690,GO:0036094,GO:0036310,GO:0036314,GO:0036315,GO:0036436,GO:0036437,GO:0040007,GO:0040026,GO:0040028,GO:0040029,GO:0040034,GO:0042127,GO:0042221,GO:0042493,GO:0042623,GO:0042752,GO:0042766,GO:0043044,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043401,GO:0043486,GO:0043565,GO:0043933,GO:0043934,GO:0043936,GO:0043954,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0045996,GO:0046019,GO:0046020,GO:0046483,GO:0046688,GO:0048229,GO:0048232,GO:0048468,GO:0048506,GO:0048509,GO:0048510,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060194,GO:0060195,GO:0060255,GO:0060260,GO:0060303,GO:0060322,GO:0061062,GO:0061063,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0070615,GO:0070827,GO:0070828,GO:0070829,GO:0070868,GO:0070870,GO:0070887,GO:0070925,GO:0071103,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071345,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071444,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090537,GO:0090568,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0097549,GO:0097617,GO:0097659,GO:0098813,GO:0140097,GO:0140110,GO:1900034,GO:1900036,GO:1900049,GO:1900050,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904949,GO:1905268,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000142,GO:2000177,GO:2001141,GO:2001251 |
EggNOG free text desc. | helicase activity |
EggNOG OGs | COG0553@1,KOG0385@2759 |
COG Functional cat. | KL |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01000,ko03021,ko03036 |
Exons | 7 |
Model size | 804 |
Cds size | 804 |
Stop | 1 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816953.5625367-CDS-L-elsbetiae_contig8734:1067..1172 | 1622816953.5625367-CDS-L-elsbetiae_contig8734:1067..1172 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 1068..1172 + |
1691683937.9229305-CDS-L-elsbetiae_contig8734:1067..1172 | 1691683937.9229305-CDS-L-elsbetiae_contig8734:1067..1172 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 1068..1172 + |
1622816953.574051-CDS-L-elsbetiae_contig8734:1646..1762 | 1622816953.574051-CDS-L-elsbetiae_contig8734:1646..1762 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 1647..1762 + |
1691683937.9391723-CDS-L-elsbetiae_contig8734:1646..1762 | 1691683937.9391723-CDS-L-elsbetiae_contig8734:1646..1762 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 1647..1762 + |
1622816953.584534-CDS-L-elsbetiae_contig8734:2278..2357 | 1622816953.584534-CDS-L-elsbetiae_contig8734:2278..2357 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 2279..2357 + |
1691683937.9519956-CDS-L-elsbetiae_contig8734:2278..2357 | 1691683937.9519956-CDS-L-elsbetiae_contig8734:2278..2357 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 2279..2357 + |
1622816953.5953062-CDS-L-elsbetiae_contig8734:3096..3270 | 1622816953.5953062-CDS-L-elsbetiae_contig8734:3096..3270 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 3097..3270 + |
1691683937.9704394-CDS-L-elsbetiae_contig8734:3096..3270 | 1691683937.9704394-CDS-L-elsbetiae_contig8734:3096..3270 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 3097..3270 + |
1622816953.6062672-CDS-L-elsbetiae_contig8734:4008..4107 | 1622816953.6062672-CDS-L-elsbetiae_contig8734:4008..4107 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 4009..4107 + |
1691683937.9825068-CDS-L-elsbetiae_contig8734:4008..4107 | 1691683937.9825068-CDS-L-elsbetiae_contig8734:4008..4107 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 4009..4107 + |
1622816953.6179442-CDS-L-elsbetiae_contig8734:5003..5114 | 1622816953.6179442-CDS-L-elsbetiae_contig8734:5003..5114 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 5004..5114 + |
1691683937.9913042-CDS-L-elsbetiae_contig8734:5003..5114 | 1691683937.9913042-CDS-L-elsbetiae_contig8734:5003..5114 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 5004..5114 + |
1622816953.6298983-CDS-L-elsbetiae_contig8734:5987..6107 | 1622816953.6298983-CDS-L-elsbetiae_contig8734:5987..6107 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 5988..6107 + |
1691683938.000505-CDS-L-elsbetiae_contig8734:5987..6107 | 1691683938.000505-CDS-L-elsbetiae_contig8734:5987..6107 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig8734 5988..6107 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8734.17764.1 >prot_L-elsbetiae_contig8734.17764.1 ID=prot_L-elsbetiae_contig8734.17764.1|Name=mRNA_L-elsbetiae_contig8734.17764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp
MSCLVEQELRTRGKRLEAQGDEEEHAARLEKEANALELSPKDQEQKKRLI ENAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIK VFWKRCRELSDHGKIMEKIEKGEKRIFRSKQIRSAIDSKVTRHANPWSDL TINYYGGKGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWF FKSRNAAELQRRGDTLIRLVEKENEELETSGHGGKKRKSFSASEQTASSK KKKPSTPATGGKKQRRR* back to topmRNA from alignment at L-elsbetiae_contig8734:1068..6107+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig8734.17764.1 ID=mRNA_L-elsbetiae_contig8734.17764.1|Name=mRNA_L-elsbetiae_contig8734.17764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5040bp|location=Sequence derived from alignment at L-elsbetiae_contig8734:1068..6107+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCGTGCCTTGTTGAGCAGGAGCTGAGGACGAGAGGCAAGAGGCTGGA
GGCGCAGGGTGACGAGGAGGAGCACGCCGCCCGCCTCGAAAAGGAGGCGA
ATGCGGTACGGGTCATCGATCTCGCCCCACATTATCTATTATTCCACGTA
CTACTAACCTGTAGAACAGCATTTCAGCATGCCCGCTGTGTAGCCCGTGG
AGGTATATTAGATGCATGACTAGTTCGCGCCGTATTTTGGGGGGTCTGTG
GAAGGAATACACATGTATATGTATGTGTACCTGCGAACACACGGACGGGT
TCACGCCACAGCAATGGGTTTCGATACACTGGCCTCGAAAGTAAATGTAT
TTAGAGGTTGCCGCGTTTGCCAGAGAGAAGGTACCTAAACTCAACGACTT
GCTGCTGCTGTTGTTGTTGTTGTTGTTGTTGCTATTGCTGTTGCCGCTGC
TGCTGTTGGCCGCTGCTGCTGTTGGCCGCTCTGGTGGTAACTGTGTGTTT
GTTCGTCCGTGGTTTTATGTATACATATAACGTTGGTTTTTTTTTGTCTC
TCTTGTCTCTTTTGTCTCCTGTCGGCCAGTTGGAGCTTTCTCCCAAGGAC
CAGGAGCAGAAGAAGCGCCTGATCGAGAACGCCTTCGGGGACTGGAACCG
CAAGGATTTCCGCGCCTTCGTCGCCGCCACGGAGCGACACGGCCGGTGAG
CTTTTTTTTTTTTTTTATTGAACTTTTGCACGCACGCACAGCAAACCGAA
AACAGACAGAACGAAGTGGGGCTCTTTAAAATACAATACCCTCTTTCTTT
TTTGAAAGATAAATTTAAGCAGATAATCAAAAATGGAACCTAAGCCACAT
TGGAGACGGGACTCCCGTGAGAATTTTCGTTTATAAATAAAAAAAATAAT
AAGGAAGTCAAAGAAAGGACCTCCCCACATTAGAGGGACTCCCTGGTGAA
TTAACAGCACTTTTAATACGGGCAGTGACGTAAATAGTAATATACCCTTT
TTTTTTTCTTCTTGTCTTTTTGTAATTAATGTATACAAATGTCAGCAGTC
TACGTCTGCCCAGTCTGCGAAAAAGTCGTTCGAGAGGGACTGGTGTAGGC
ATACCAACCTTCCCTCCCTTAACATACTAGCACCAAATCAGCACTCCTAC
TACTAACTATTGTATTCCATTTTTTTTCGATGTATTTCTTGGATCCGATT
CGTTCCGGAAGGGACGACACGGAGGCGGTGGTGCGCGACGTGTGTCTGGA
GACGGCCAAGACGGAGGAGAACGTCCGCAAGTACATCAAGGTGAGCACAA
TACAGCAGTTCGGTGCAATAATGTGTAGGTAATGTTACGAAATATAGATA
AGAAACAATAATTTGTGTCACGTAAATATTTGGGTAATTTTTTTTTTTTT
TTTATGTCTCCACATTTTGAACTTTTATGGCGCGGTTTCCGCTCTAGACC
TACAATACCTACCATTTGTACAATCTGTTGGGATGGGTTTTGCTCCTGCG
TCTTGGAGCACTTCGACATGTATAAATATTTGGTTTAGGAGGGGGGGGGG
GTTCGTACCCCGAGAGTTTTACTTGTACACGTTCTTGCTGGTTGTTTGGC
GGTCCTACATATGTACATAAACGCGACCCAGGTAGTTGACAAGAGAAGGG
ACAGCCGAACCCTTCTTGCGATAAAATGAAGGCAAGTACCGCAGGAGGAA
GGTGGGGCAAAAAAAGAAGAAAACAAAAAAGAAAGAAGAAAAAGCCCCAG
TGTTCACCTCCTCCTGTGTGACCCCGGTTGGTTCTAGTTGTACAGACAAA
TGCGCTGCAAAGTGTAGTACCTCCAAGTACACCGCAAGGTGTAGTACACG
TCTCCACTTGGGGGGAATGTCGCCAAAATAAATGGGAAGGACACACACAC
AGGTATGTACTTGTAATTTACTATATATATATTTTATTTTATTTTTTATT
TGTAATTTGTATATATTACTGAAAAAGTATAATTGACCCCTCTTTTGCTC
CTTCTTGTCCTTTTCCTGGAACCTTCCAGGTGTTCTGGAAGCGGTGCCGA
GAGCTTAGCGACCACGGCAAGATCATGGAGAAGATCGAGAAGGGAGAGAA
GCGCATCTTCCGATCCAAGCAGATCCGATCGGCCATCGACAGCAAGGTCA
CCCGACACGCAAACCCGTGGAGCGACCTCACCATCAACTACTACGGCGGC
AAGGTGCGTTGCGCCACCACCAGACAGACAACACACACACACACACACAC
ACAGGGAAACCGAAACAGTGATGGTCCTTGCTTCGACCTTTTATTTTGTC
CTGCGGGGGGCCGCGGCACGGACGGTATCTACGCTGAATGTAACGGCTGT
GTACGTAGAAACCATGTACTTCTAGTAGGTCTATGTATTACGAATTGACA
AATTTGCTGACAGCTGAGACATGTCGTGCCTGACAGCTCGCCATTTCGAG
CGCTGCTGGACATTTTCTCAGAGCTATCTCGGAAAGCAGGTAGTGGGTAC
TTGGGGTGTTCTTGTTGCTGTATTGTCTTCGAAGAGAGGCTTCGCACGAG
CGAGAGAAAAATAAGGGAGATATTTAGATAACACACAGGCCGTGTGTATG
TATGTATGTATGTATGTATGTTGCCGCTGTTGTCGTTGTTGCTGCCGCGG
AGATGTTTCCCTCTTTGGCCGTTCGTCGTTGACAGTCCCTAATTGTTGAC
AGTCCCCCAGCTGTTGCTAACAGTCCCCGAGCGTTGTTGACAGTCCCGTT
GCTGTTCACAGCCCCCGCTGTTTGTTGCGGTTGTTGATGATGACGTTGCT
GCTGCTGCTGCTGCTCTTCTGGGCGGTGAATTTCCCACAGCAGCACGCAC
CACACCGCAACGCGTTTCTTCTCACCCGTACATACAACCCCACCCGTCTT
TCCCCCCCTTTGGCGTTTTTGTCGTTTTGACGTGTGACCAGGGCAAAGTG
TTCACGGAGGAGGAGGACGCGTTCCTGCTGAACATGATGCACCGGTACGG
ATACGGCAACTGGGAAGTCATCAGGATGGAAATCCGCAAGGTACGTACGT
ACGTACGTACATACATACATACATACATACATACATACCGTCGGTGACAT
GACACAAGATACCACACCCCCTGGACCGACTTTTTGGGCTCCGTTACTCC
GTAACGAAGAGGGTGCCAGCACCGGACGACCACACATTTTCGGACAGCAG
CCATCCCTCCTCGACTAGATCTTTCCAACCCCACCCCCTTTCGGCACTGG
TACTCTTCTTGCTGGGGAGGGAGGGGTCGAGCTTTGAGATCTGTCCAGGG
GGGCGGGGTTGTATCTTGTGTCACCTACGGTATACATGGTATCTCTTTAG
TATGTATTAAGAATGTGTCAGAGGTAGTAGGTCGGGTTTATACATAGGTT
CACCTTTTTTCTTTTTTTTTTTGTGCCTTCTACTATTCTCCAGTGCGGTT
TTTTCAGGCGGCTTGGAAAAGGGTAGAGGATGCGTCCGTCTATGGTTGGG
TTTGACTCAAAAACGGCCAAGACTTTTTTTTTTCGTTTCTGTTTTTCCTT
TTGTTTGTGCGCTTGATTTGTAGAAATACAACATAAAAAGTGTTGGATTT
TGTTTTTGCCTTTTGTCGGGGTGTATTTGTTTTTTATTTATTTTTATATT
TTTTACTTTTTTGTACATGTATGTACTCCCTTTTATTTTATTTTATGTAC
CCCGGGCTGTTTTGTTCTTCAAAACGCCACCTTTGCCTTGCAGCAGTATC
GCACACCCTACCCTGGCCCCTTCCCAAAAGCGGTCCTGCTGCCAACACCA
ACACTGCGACAAAGGACGTAGCCCAGCTTTGGTATATAGAAGTATGTACA
TGAAAGATGCCTACCTTTATGATGATGATATCGAGCACCCCCCCCCCCCC
CCCCCCTCCCCTTTATTTCGCTTTCTGGAATATAAGGCGTGGCAATTCCG
GTTCGACTGGTTCTTCAAGAGCAGAAACGCGGCGGAACTGCAGAGGAGGG
GTGACACTCTGATCCGCCTCGTGGAGAAGGAAAACGAGGAGCTGGAGGTA
ATTTTTCTCTCTCCTTTTTTTTTTTTTCTCTCTCTCTCTCTTTTTGCGTG
CGTCTGTTGAAAAAAAAATTGCTCGAAGCGCACGTCTTGCGAAGCAACAA
ACAACATCGCTACGGCCGTCTACTTGGATGTTTTATCAATTTGGCTGCAC
ACGCACCTCTCCTTTGTTGGTTGTTGTTGTTGTTGATGATCCTCCTCGCA
TCCTTCCTGCACACCAAGCATCTCGTCTCCCGTAAAAAGCGTCCCTTTTT
ACACTCCTGCTCAAACCACACCTCCCCCGCGCGGTTGACTTGAAAAATCA
ATGGGTGACGCCACTGCAACAACCCCCCCCCCCCCTCGCAAGCGCTCGTC
GTGCCTTTTCGGATGACCCGGTTAGTTGTCGTTCTGCATTTGGCTGTGCT
TTCATGTTTATCCCCTATTTATCGTGTTCAATACCTACCTCCAAGTGGCA
TCCTTAACCCCTTTGCAACGCCAAGAAATATTTATTTAATTGCAAGGCTG
GGATTGGATCTTACTCGCACAGTCCCTGATGCAGACTCCTTCTCTATCAT
CCCCATCATTTGGCCCCAAATCGATTTCGGGGCCAAATGATATAGCTTTA
TGGGGCACCCGTTCTAAACTGGGGTCGAAAAGTTTGTTTTATGACTTGGG
GGCCATAATGTGGCCCCAAATGCTTTGTGGTCCTAAAGGGGTTAAATAGA
TGGTCTGCATTCTGCGTCCCGAGTCCCCAAGAGTTCCCCTCCCTAGCGCG
CAACGTCTCTCACACGCACACCTGAACCCCGTCGGCTGTTGATCAAACCC
TCAGCCACTAACTACTGCTCTGTCTGTGCTGTTGTTGTGCCTCCCTCCCA
ATGAATATCTTTGTTGTCAGACATCGGGACACGGCGGCAAGAAGCGTAAG
AGCTTCTCGGCTTCGGAGCAAACCGCGTCGTCGAAGAAGAAGAAGCCGTC
CACTCCCGCCACCGGCGGCAAGAAGCAGCGCCGCCGATGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig8734:1068..6107+ >mRNA_L-elsbetiae_contig8734.17764.1 ID=mRNA_L-elsbetiae_contig8734.17764.1|Name=mRNA_L-elsbetiae_contig8734.17764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1608bp|location=Sequence derived from alignment at L-elsbetiae_contig8734:1068..6107+ (Laminarionema elsbetiae ELsaHSoW15) ATGTCGTGCCTTGTTGAGCAGGAGCTGAGGACGAGAGGCAAGAGGCTGGA GGCGCAGGGTGACGAGGAGGAGCACGCCGCCCGCCTCGAAAAGGAGGCGA ATGCGATGTCGTGCCTTGTTGAGCAGGAGCTGAGGACGAGAGGCAAGAGG CTGGAGGCGCAGGGTGACGAGGAGGAGCACGCCGCCCGCCTCGAAAAGGA GGCGAATGCGTTGGAGCTTTCTCCCAAGGACCAGGAGCAGAAGAAGCGCC TGATCGAGAACGCCTTCGGGGACTGGAACCGCAAGGATTTCCGCGCCTTC GTCGCCGCCACGGAGCGACACGGCCGTTGGAGCTTTCTCCCAAGGACCAG GAGCAGAAGAAGCGCCTGATCGAGAACGCCTTCGGGGACTGGAACCGCAA GGATTTCCGCGCCTTCGTCGCCGCCACGGAGCGACACGGCCGGGACGACA CGGAGGCGGTGGTGCGCGACGTGTGTCTGGAGACGGCCAAGACGGAGGAG AACGTCCGCAAGTACATCAAGGGACGACACGGAGGCGGTGGTGCGCGACG TGTGTCTGGAGACGGCCAAGACGGAGGAGAACGTCCGCAAGTACATCAAG GTGTTCTGGAAGCGGTGCCGAGAGCTTAGCGACCACGGCAAGATCATGGA GAAGATCGAGAAGGGAGAGAAGCGCATCTTCCGATCCAAGCAGATCCGAT CGGCCATCGACAGCAAGGTCACCCGACACGCAAACCCGTGGAGCGACCTC ACCATCAACTACTACGGCGGCAAGGTGTTCTGGAAGCGGTGCCGAGAGCT TAGCGACCACGGCAAGATCATGGAGAAGATCGAGAAGGGAGAGAAGCGCA TCTTCCGATCCAAGCAGATCCGATCGGCCATCGACAGCAAGGTCACCCGA CACGCAAACCCGTGGAGCGACCTCACCATCAACTACTACGGCGGCAAGGG CAAAGTGTTCACGGAGGAGGAGGACGCGTTCCTGCTGAACATGATGCACC GGTACGGATACGGCAACTGGGAAGTCATCAGGATGGAAATCCGCAAGGGC AAAGTGTTCACGGAGGAGGAGGACGCGTTCCTGCTGAACATGATGCACCG GTACGGATACGGCAACTGGGAAGTCATCAGGATGGAAATCCGCAAGGCGT GGCAATTCCGGTTCGACTGGTTCTTCAAGAGCAGAAACGCGGCGGAACTG CAGAGGAGGGGTGACACTCTGATCCGCCTCGTGGAGAAGGAAAACGAGGA GCTGGAGGCGTGGCAATTCCGGTTCGACTGGTTCTTCAAGAGCAGAAACG CGGCGGAACTGCAGAGGAGGGGTGACACTCTGATCCGCCTCGTGGAGAAG GAAAACGAGGAGCTGGAGACATCGGGACACGGCGGCAAGAAGCGTAAGAG CTTCTCGGCTTCGGAGCAAACCGCGTCGTCGAAGAAGAAGAAGCCGTCCA CTCCCGCCACCGGCGGCAAGAAGCAGCGCCGCCGATGAACATCGGGACAC GGCGGCAAGAAGCGTAAGAGCTTCTCGGCTTCGGAGCAAACCGCGTCGTC GAAGAAGAAGAAGCCGTCCACTCCCGCCACCGGCGGCAAGAAGCAGCGCC GCCGATGA back to top
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