mRNA_L-elsbetiae_contig8706.17733.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: D8LLB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB0_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.680e-16 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 46 VHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRSPKRPKNDVGS-RNLRQDKKGCEKKQ 291 VH+ W EV+RFWKDKRSR+GKPLLRRFWPVT NDT+ H FR ++ +E+ LR K KND+ S R L+Q KK EK+Q Sbjct: 143 VHHDAWTEVYRFWKDKRSRMGKPLLRRFWPVTPSNDTDPHKVFRPRE-KERYKLR----KHRKNDLDSFRKLQQVKKDFEKQQ 220
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A835YT95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT95_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.610e-13 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 4 AEPLFVSKLGMNKDVHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLR 210 AE LF S+LGM K + VW +V+ +WK +R +LGKPLL+RFWP T NDT+ H FR ++ +E+ LR Sbjct: 138 AEALFTSQLGMEKHQYQAVWNDVYSYWKQRRQKLGKPLLQRFWPTTSANDTDPHKVFRPRE-KERYKLR 205
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A7S1TPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPQ6_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.910e-13 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 4 AEPLFVSKLGMNKDVHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRSPKRPKNDVGS 249 AE LF+ K N+ H ++WA+V+++W++KR RL +PLLR++WPVT ND N H FR REK + R +R ND+ S Sbjct: 126 AEHLFMYKFTQNRPTHGRMWADVYKYWEEKRKRLKRPLLRKYWPVTSVNDNNPHKVFR---PREKERYKLRRNRR--NDLES 202
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A196SEH5_BLAHN (Enhancer of polycomb-like protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SEH5_BLAHN) HSP 1 Score: 65.1 bits (157), Expect = 5.060e-9 Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 7 EPLFVSKLGMNKDVHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRSPKRPKNDVGSRNLRQDKKGCEKKQTTTQMVQK 315 E LF+ KL N+ ++V V +WK KR LGKPLLRR+WP+T NDTN + FR + E LR ++ +P +V R L + K E+ +T Q+ K Sbjct: 113 ETLFMQKLQFNRVDSHEVCKAVLEYWKKKRKELGKPLLRRYWPLTNVNDTNPNLVFRPRGKDEHYRLRKKN--KPNEEVLER-LIELKANLEQGRTLCQLTHK 212
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: UPI000712180D (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000712180D) HSP 1 Score: 65.1 bits (157), Expect = 5.390e-9 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 7 EPLFVSKLGMNKDVHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRSPKRPKNDVGSRNLRQDKKGCEKKQTTTQMVQK 315 E LF+ KL ++ ++V + +WK KR LGKPLLRR+WP+T NDTN + FR + E LR +S +P ++ R + + K E QT Q+ K Sbjct: 158 ETLFIQKLQFSRLDSHEVCKHILDYWKKKRKELGKPLLRRYWPLTNVNDTNPNLVFRPRSKDEHYRLRKKS--KPNEEILERMI-ELKANLEHAQTLCQLTHK 257
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A7S3Q9L6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9L6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.760e-7 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 1 KAEPLFVSKLGMNKDVHY----QVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLR 210 K++ + +K NK H V +EV+ +W +KRS+L KPLLR++WPVT NDTN H FR ++ +EK LR Sbjct: 267 KSDDIKGTKQRRNKKEHRVNVRTVISEVYNYWVNKRSKLKKPLLRKYWPVTASNDTNPHMVFRPRE-KEKYKLR 339
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: D8M754_BLAHO (Enhancer of polycomb-like protein n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8M754_BLAHO) HSP 1 Score: 58.9 bits (141), Expect = 6.480e-7 Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 7 EPLFVSKLGMNKDVHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRS 219 E LF+ KL ++ ++V + +WK KR LGKPLLRR+WP+T ND N + FR + E LR ++ Sbjct: 105 ESLFLQKLQFSRVDSHEVCKHILDYWKRKRKELGKPLLRRYWPLTNVNDPNPNLVFRPRCKDEHYRLRKKN 175
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A7S1VI11_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VI11_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 7.460e-7 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 13 LFVSKLGMNKDVHY-QVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLR 210 +F SK + V QV +V+++W KRS+L +PLLRRFWPVT +DTN H FR ++ +EK LR Sbjct: 2 IFPSKASQSGLVSVKQVIHQVYQYWVQKRSKLKRPLLRRFWPVTATDDTNPHQVFRPRE-KEKYKLR 67
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A7S2EGN1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGN1_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.240e-6 Identity = 34/84 (40.48%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 67 EVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRSPKRPKNDVGS-RNLRQDKKGCEKKQTTTQMVQK 315 +V+ +W KRS+L +PLLR++WPVT NDTN H FR ++ +EK LR K+ +ND+ S R ++Q + ++ +T +V+K Sbjct: 140 DVYNYWVQKRSKLKRPLLRKYWPVTSSNDTNPHMVFRPRE-KEKYKLR----KKRQNDMDSYRKMKQLRSDFDRVRTLLTLVKK 218
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Match: A0A7S1ZJ62_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJ62_TRICV) HSP 1 Score: 57.4 bits (137), Expect = 1.930e-6 Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 58 VWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNDTNLHNTFRLKQTREKSNLRPRSPKRPKNDVGS-RNLRQDKKGCEKKQTTTQMVQK 315 V +V+ +W +KRS+L KPLLR +WPVT NDTN H FR ++ +EK LR K+ +ND+ + R ++Q +K +K + +V++ Sbjct: 13 VIGDVYGYWVNKRSKLKKPLLRWYWPVTSSNDTNPHQVFRPRE-KEKYKLR----KKRQNDMDAYRKMKQLRKDFDKVRVLLDLVRR 94 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8706.17733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8706.17733.1 >prot_L-elsbetiae_contig8706.17733.1 ID=prot_L-elsbetiae_contig8706.17733.1|Name=mRNA_L-elsbetiae_contig8706.17733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp KAEPLFVSKLGMNKDVHYQVWAEVHRFWKDKRSRLGKPLLRRFWPVTQFNback to top mRNA from alignment at L-elsbetiae_contig8706:4170..6532+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8706.17733.1 ID=mRNA_L-elsbetiae_contig8706.17733.1|Name=mRNA_L-elsbetiae_contig8706.17733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2363bp|location=Sequence derived from alignment at L-elsbetiae_contig8706:4170..6532+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8706:4170..6532+ >mRNA_L-elsbetiae_contig8706.17733.1 ID=mRNA_L-elsbetiae_contig8706.17733.1|Name=mRNA_L-elsbetiae_contig8706.17733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig8706:4170..6532+ (Laminarionema elsbetiae ELsaHSoW15)back to top |