mRNA_L-elsbetiae_contig864.17674.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig864.17674.1 vs. uniprot
Match: D8LPR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR4_ECTSI) HSP 1 Score: 473 bits (1216), Expect = 2.940e-146 Identity = 321/628 (51.11%), Postives = 393/628 (62.58%), Query Frame = 1
Query: 2269 MENLAKVLRRAYDPTLQQLWADWAVNEGDERWLLIEIHGIRTDADIHSAAAARAVPPAFAQVESKVYRSIHHTPSKNFCGDPDDLQARLAAANPTQELSLVEISKRAVAAA-STHHPSRPPTPSNVAASTKKALLAKRGAVSEQETSRRKCS--GARQMRNQYWRCAGDFCETHSAGQRWKSPS-----HGKVNHDPETTSSTVERQS--AGGAKMDNNSGTAKCWGTGVAGEEGRGGGAGRG----DGRDYEVEDIIGRRKHALAVETPRTVLFRLVLNARAALLEWRPSAFDFSQMEKPVQLCSACFMVCSTLERERIETTRRAMDAAAQAAKEGKARRNRRPPGWKSRLQHELEESLDADRYVVSRLIDSFETTSA-ATAXXXXXXXXXXXXXXXIRDK-----NHLRSRQKGSGGTTDGG---GSVTWADRCPLAEVSLDEEKDR-------------ADVSAQFTPRGMVSAPAAGQTLMVASTRKTKTAPLAPASGLKRLSPVQQATLTKTTSIL-GAGAKREPEEKAK----------KREIRARRKXXXXXXRRLRNSVTDDASARSVSVRGKPSGKK--GNDIGFSGGKTGGTENTDDHKRDTEHELPTILWPTAPTSL 4005
ME L VLR+AYDPTLQ+LWADWAV+E + +W L+E+HG++T+AD+ +AAAA+AVPPA A+VESKV RS P K+ CGDPD+L+AR++AA PTQELS VE SK+ +A A S P RPPTPS VA STKKALL++R SE++ S K GAR+M NQYWRCAGDFCETH GQR S G ++ ET S V + S A G + N G A E+ GG G DG + E +DI+GRRKHAL+VETPRTVLFRLVLNARAALL WRPSA +FS MEKPVQLCS C+MVCST+ER+RIETTRRAMDA +AAK GKARRNR+PPGWKSR+QHELEESL ADR+VVSRLIDSFE +A A A XXX K N+ R+ GG GG VTWADR P+ E+ EE + SA TPR V AG+T + S R++KTAPLAP+SGL VQQ + +T ++ G AKR K + K ++RARRK XXXXX ++RN TD A+ R +P GK+ G + G+ G T D K+ + P +L PTAPT+L
Sbjct: 1 MEKLTTVLRKAYDPTLQRLWADWAVHEDNGQWYLVEVHGVKTEADLRNAAAAKAVPPALAEVESKVSRSTRRIPPKHICGDPDELRARISAAGPTQELSFVEPSKKMIAVAESKRRPRRPPTPSMVAESTKKALLSRREGASERKKSVPKGGDGGARRMLNQYWRCAGDFCETHPDGQRQASADATGDKKGNRDNKVETGSLVVSQPSERARGRPVRNR-------GLEGASEKSSTGGGGXXXXXXDGTECEEDDIVGRRKHALSVETPRTVLFRLVLNARAALLRWRPSAAEFSMMEKPVQLCSVCYMVCSTIERDRIETTRRAMDAEEEAAKAGKARRNRKPPGWKSRVQHELEESLSADRHVVSRLIDSFEAAAAIAMAAAAPNGEKIKRAXXXXXXKICGSNNYQEVRENREGGGDRGGRRESGVTWADRYPVVEIRQQEENEEDACGESMLAKTGGVSRSAHSTPRKKVVG--AGRTSLGPSNRRSKTAPLAPSSGLTIPPLVQQESGEETPPVVVGLDAKRTQNRKEEEQRQIQPSRTKLQVRARRKAXXXXXXQVRNKATDGAA------RNEPFGKQRDGKILAEDDGRAGSTPG--DQKKIDPDKFPPLLQPTAPTAL 611 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig864.17674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig864.17674.1 >prot_L-elsbetiae_contig864.17674.1 ID=prot_L-elsbetiae_contig864.17674.1|Name=mRNA_L-elsbetiae_contig864.17674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1335bp MAEVGMLLRGPPSEVWARSLRQETALQDHYRRSIHHGDSGVANVGFDRWNback to top mRNA from alignment at L-elsbetiae_contig864:3397..13413+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig864.17674.1 ID=mRNA_L-elsbetiae_contig864.17674.1|Name=mRNA_L-elsbetiae_contig864.17674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10017bp|location=Sequence derived from alignment at L-elsbetiae_contig864:3397..13413+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig864:3397..13413+ >mRNA_L-elsbetiae_contig864.17674.1 ID=mRNA_L-elsbetiae_contig864.17674.1|Name=mRNA_L-elsbetiae_contig864.17674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=8010bp|location=Sequence derived from alignment at L-elsbetiae_contig864:3397..13413+ (Laminarionema elsbetiae ELsaHSoW15)back to top |