mRNA_L-elsbetiae_contig8590.17627.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: D7FY19_ECTSI (Sorting and Assembly Machinery 35kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY19_ECTSI) HSP 1 Score: 263 bits (672), Expect = 2.930e-84 Identity = 132/185 (71.35%), Postives = 152/185 (82.16%), Query Frame = 1
Query: 1 PERTWWDPRHALRALRRIGEQPGPEQPEPSIARGTSLDVMVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSPAAEDRRSRRESTVRGLDGITK 555
P RT W+P ALR+ RI EQP EQP P I G++LDVMVV QFRPAWEIQA+LRF RLPYRVEN+ Y GSAATGL+PAL DGQFVL +E AGH+A RR+DVD L++ +K EA+AL+ LVREGLQPLLRVMRY GDEGE+R TV+PPMKKAL WPLSWWSPAAE RRS+RES VRGLD ++K
Sbjct: 11 PVRTSWNPLRALRSWGRIEEQPDLEQPGPVITHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPALTDGQFVLRSEDAAGHIASRRSDVDVGLTEAEKVEAQALAMLVREGLQPLLRVMRYMGDEGEVRQTVHPPMKKALSWPLSWWSPAAEGRRSKRESAVRGLDRLSK 195
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A835ZEI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI3_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.210e-28 Identity = 59/129 (45.74%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 121 VVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSPAAEDR 507
V++QFRPAW QAYLRF+ +P+R+EN+R+A S TG +P L DG F+LP H+ R D+DS L+ ++A+A A + +V++ L PLL +R+ DE ++R TV PM++ALP PL + P E R
Sbjct: 42 VLIQFRPAWTEQAYLRFSGIPHRLENSRFASSEVTGTYPQLQDGHFLLPGGAIVQHLTTYRRDLDSNLTGLERADAVAFAAVVKDVLAPLLEAIRWSADERDVRRTVERPMRRALPPPLRYVVPWLESR 170
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: W7TNF1_9STRA (Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF1_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.010e-18 Identity = 62/157 (39.49%), Postives = 80/157 (50.96%), Query Frame = 1
Query: 76 QPEPSIARGTSLDVMVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARR--RADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSPAAEDRRSRRESTVRGL 540
+P P A V++QFRPA+ +Q YLRF R PY V N Y G P LMDGQF+LP E G++ D+D+ LS ++A+ AL LVRE L P + RYR DE V + +A +PL AE RR +E RGL
Sbjct: 61 EPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYR-DERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGL 216
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A484E832_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E832_BRELC) HSP 1 Score: 84.7 bits (208), Expect = 5.160e-16 Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 118 MVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
+V+ QF PAW++QAYLR A + V N+RY ATG P L DG F+LP E H+ D+D LS Q++E+ A +++ E L+ +L R+ D R P MK+ +P+PL+ + P
Sbjct: 41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSRYPAYEATGELPQLSDGNFLLPKEKIIVHLQTFHKDIDEFLSDAQRSESYAYRSMLSEKLERVLLYCRWV-DSASYREITRPHMKRHIPFPLNHFLP 164
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A2D4BE19_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE19_PYTIN) HSP 1 Score: 84.7 bits (208), Expect = 6.190e-16 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 121 VVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
V+ QF PAW++QAYLR A+L V N++Y ATG P L DG F++P + H+ D+D LS QK+E+ A +VRE LQ +L R+ D + P +KK +P+PLS + P
Sbjct: 54 VLHQFFPAWDVQAYLRMAKLRLHVHNSKYPLYEATGELPQLSDGNFLVPKDEIIQHLQTFHVDLDDGLSDLQKSESYAYRAMVREKLQRVLAFCRWV-DPITYKEITRPHLKKHIPFPLSHFLP 176
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A3M6VA82_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA82_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 7.170e-16 Identity = 49/126 (38.89%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 115 VMVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
V+V+ QF PAW+IQAYLR A + V N++Y ATG P L DG F+LP E H+ D+D LS Q++E+ A +++ E LQ ++ R+ D R P MK+ +P+PL+ + P
Sbjct: 40 VLVLHQFLPAWDIQAYLRVAGICLHVHNSKYPIYEATGALPQLSDGNFLLPKEEIIMHLQTFHKDIDDFLSDAQRSESYAYRSMLSEKLQRVVLYCRWV-DSSTYREVTRPHMKRNIPFPLNLFLP 164
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: V9E996_PHYPR (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=V9E996_PHYPR) HSP 1 Score: 83.6 bits (205), Expect = 1.290e-15 Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 118 MVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
+V+ QF PAW++QAYLR A + V N++Y ATG P L DG F+LP E H+ D+D L+ +Q++E+ A +++ E LQ ++ R+ D R P MK+ +P+PL+ + P
Sbjct: 41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSKYPTYEATGELPQLSDGNFLLPKEEIIMHLQTFHKDIDEFLTDQQRSESYAYRSMLSEKLQRVMMYCRWV-DSATYREVTRPHMKRHIPFPLNLFLP 164
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A662WHC2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHC2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.410e-15 Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 118 MVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
+V+ QF PAW++QAYLR A + V N+RY ATG P L DG F+LP E H+ D+D+ L+ EQ++ + A +++ E LQ ++ R+ D R P MK+ +P+PL+ + P
Sbjct: 41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSRYPTYEATGELPQLSDGNFLLPKEQIIMHLQTFHEDIDAFLTDEQRSASFAFRSMLSEKLQRVMLFCRWV-DSATYREVTRPHMKRHIPFPLNLFLP 164
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A225WHD0_9STRA (Putative mitochondrial protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A225WHD0_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.880e-15 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 118 MVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
+V+ QF PAW++QAYLR A + V N++Y ATG P L DG F+LP E H+ D+D LS Q++E+ A +++ E LQ ++ R+ D R P MK+ +P+PL+ + P
Sbjct: 41 LVLHQFLPAWDVQAYLRIAGIRLHVHNSKYPTYEATGELPQLSDGNFLLPKEEIIMHLQTFHKDIDEFLSDAQRSESYAYRSMLSEKLQRVMLYCRWV-DPATYREVTRPHMKRNIPFPLNLFLP 164
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Match: A0A6A3RSX2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RSX2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.540e-15 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 118 MVVMQFRPAWEIQAYLRFARLPYRVENTRYAGSAATGLFPALMDGQFVLPAEGTAGHVARRRADVDSALSKEQKAEARALSTLVREGLQPLLRVMRYRGDEGEIRHTVYPPMKKALPWPLSWWSP 492
+V+ QF PAW++QAYLR A + V N++Y ATG P L DG F+LP E H+ D+D LS Q++E+ A +++ E LQ ++ R+ D R P MK+ +P+PL+ + P
Sbjct: 41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSKYPVYEATGELPQLSDGNFLLPKEEIIMHLQTFHKDIDEFLSDAQRSESYAYRSMLSEKLQRVMLYCRWV-DSATYREVTRPRMKRNIPFPLNLFLP 164 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8590.17627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8590.17627.1 >prot_L-elsbetiae_contig8590.17627.1 ID=prot_L-elsbetiae_contig8590.17627.1|Name=mRNA_L-elsbetiae_contig8590.17627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp PERTWWDPRHALRALRRIGEQPGPEQPEPSIARGTSLDVMVVMQFRPAWEback to top mRNA from alignment at L-elsbetiae_contig8590:5205..8474+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8590.17627.1 ID=mRNA_L-elsbetiae_contig8590.17627.1|Name=mRNA_L-elsbetiae_contig8590.17627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3270bp|location=Sequence derived from alignment at L-elsbetiae_contig8590:5205..8474+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8590:5205..8474+ >mRNA_L-elsbetiae_contig8590.17627.1 ID=mRNA_L-elsbetiae_contig8590.17627.1|Name=mRNA_L-elsbetiae_contig8590.17627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig8590:5205..8474+ (Laminarionema elsbetiae ELsaHSoW15)back to top |