mRNA_L-elsbetiae_contig858.17617.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig858.17617.1
Unique NamemRNA_L-elsbetiae_contig858.17617.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 3.650e-123
Identity = 208/305 (68.20%), Postives = 224/305 (73.44%), Query Frame = 1 
Query:  265 EFPSEVLELCRGSLTEPSWGINPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFTDQPVPKGPDRTVGIEIT-DWKPLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVDDMRKEGLDPDVAKKRLHE---------------VVRKFIVDKAANISKGKSSGCMDTESPTTMEADHLGDGAQAVPLGDRLAQRSSFRKISAESLVLHDHVFGISLYPWSVRVLREWVVKAA 1131
            E P EVLELCR  L EPSW  NPW RPPSTVLESG ERALGWWEDVKRFGEGKSN+LKMVLVGLA AGKTTIVRH T + VPK  DRTVGIEIT DWKP DEV LQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKE+ S VDNFTDPR RI+WWLEMLHMRVPGAA+ALVGSHVD M  E  D   A+  LH                VV KFI DKA N S+ +S  C+D ES   ME DHL D         R+A RS   + +AE LVLH +VF +SL P SV  LR+W+VKAA
Sbjct:  227 EIPPEVLELCREILGEPSWHANPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTGRSVPKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESE--DARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDG-------RMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAA 522
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 7.640e-52
Identity = 96/162 (59.26%), Postives = 120/162 (74.07%), Query Frame = 1 
Query:  328 NPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFTD-QPVPKGPDRTVGIEITDWKPLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            NPW RPP   L  GL  A  WW+ + RFGEG S++LKMVLVGLAEAGKTTIVRHFT   P  K   RT+G+E+++WKP   + L VS+WDF+GQ+DY++SHQ+FLT+GALFLLVVDL    ++ +SA     DPRG I+ WL +LH RVPGA +ALVG+H D
Sbjct:  393 NPWVRPPRAFLARGLVSAGRWWDGIARFGEGTSSKLKMVLVGLAEAGKTTIVRHFTGGDPADK---RTIGVELSEWKPNKNLPLAVSLWDFSGQSDYHASHQIFLTEGALFLLVVDLFELGRDEKSA--GIPDPRGAIYRWLVILHERVPGAVVALVGTHGD 549
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.390e-34
Identity = 82/173 (47.40%), Postives = 105/173 (60.69%), Query Frame = 1 
Query:  328 NPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFTDQ---PVPKGPDRTVGIEITDWK----PLDE-----VRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            NPWK PP+ V+  G+  A  +  D+  +G   SNRLK+VLVGL EAGKT+I     D+     PK  +RTVG+EI D K    P +E     V L VS+WDFAGQ  YY +HQ+FLT GALF+LVVD+  ++ E QS  D           WLE+L  RVPG+ + LVG+H D
Sbjct:  321 NPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYT-EGQSREDALEQ-------WLEILQARVPGSVVLLVGTHTD 485
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.410e-33
Identity = 77/178 (43.26%), Postives = 106/178 (59.55%), Query Frame = 1 
Query:  316 SWGINPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFT----DQPVPKGPDRTVGIEITDWK----PLD-----EVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            S G NPW  PP+ VL+ GL  A  + +D++ FG   SNRLK+VLVGL  AGKT++          +P+P   +RTVG+EI D +    P +        L V +WDFAGQ  YY +HQ+FLT GALF+LVVD+ A+S++  S  D           WL++L  RVPG+ + L+G+H D
Sbjct:    9 STGNNPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRLGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLMGTHSD 179
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 6.970e-33
Identity = 76/174 (43.68%), Postives = 104/174 (59.77%), Query Frame = 1 
Query:  328 NPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHF----TDQPVPKGPDRTVGIEITDWK----PLD-----EVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            NPW  PP+ VLE G+  A  + +D+  FG   SNRLK+VLVGL  AGKT++        + +P+P   +RTVG+EI D +    P +        L V +WDFAGQ  YY +HQ+FLT GALF+LVVD+ A+S++  S  D           WL++L  RVPG+ + LVG+H D
Sbjct:  185 NPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLVGTHSD 351
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.150e-32
Identity = 80/177 (45.20%), Postives = 106/177 (59.89%), Query Frame = 1 
Query:  322 GINPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFTDQ---PVPKGPDRTVGIEITDWK-----------PLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            G NPWK PP+ V+E G+     + +D+  +G    NRLK+VLVGL EAGKT+I      +     PK  +RTVG+EI D K           P DE  L VS+WDFAGQ  YY +HQ+FLT GALF+LVVD+  F+ EV  + ++  +       WLE+L  RVPG+ + LVG+H D
Sbjct:   64 GENPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGIGPNDE--LDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDM--FTYEVGQSKEDALEQ------WLEILQARVPGSIMLLVGTHTD 230
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.920e-32
Identity = 80/193 (41.45%), Postives = 107/193 (55.44%), Query Frame = 1 
Query:  268 FPSEVLELCRGSLTEPSWGINPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFTDQP---VPKGPDRTVGIEITDWK---------PLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            FP  V E    S        NPWK PP+ V++ G+  A  +  D+  +G   SNRLK+VLVGL  AGKT+I     D+     P   +RTVG+EI + K             V L VS+WDFAGQ  YY +HQ+FLT+GALF+LVVD+ A+++           P   +  WL++L  RVPGA + LVG+H D
Sbjct:    6 FPRLVAEEFAASSVTVDTDNNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAEG--------HSPEDAVEQWLDILQARVPGAVLLLVGTHTD 190
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.260e-29
Identity = 70/164 (42.68%), Postives = 99/164 (60.37%), Query Frame = 1 
Query:  328 NPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFTDQPVPKG-PDRTVGIE--ITDWKPLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVD 810
            NPW+ PP  V++ G ++ + + E + + G      LK+VLVG   AGKTT+ R   D  + +  P RT GI+  I  W P  +  L+V +WDFAG  DY+S+HQ+FLT GAL LLVVDLH F ++V S         G ++ WL+ L  RVPG+A+ +V +H D
Sbjct:  153 NPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSR-------GGGVYIWLDSLLCRVPGSAVLVVATHAD 309
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: A0A813TUL2_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813TUL2_9BILA)

HSP 1 Score: 112 bits (280), Expect = 3.470e-23
Identity = 77/254 (30.31%), Postives = 132/254 (51.97%), Query Frame = 1 
Query:  337 KRPPSTVLESGLERALGWWEDVKRFGEGKS--NRLKMVLVGLAEAGKTTIVRHFTDQPVPKGPDRTVGIEITDW--KPLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVDDMRKEGLDPDVAKKRLHEVVRKFIVDKAANISKGKS-SGCMDTESPTTMEADHLGDGAQAVPLG-DRLAQRSSFRKISAESLVLHDHVFGIS 1080
            K PP  +++ G    L +   ++R   GK    R K++LVGL EAGKT+++           P+ T GI+I DW  +  D+ +L  S+WDFAGQ+ YY+SHQ FL+  A++ LV ++   S           D  G  FW L  ++   PGA I ++G+H+D++ K  L+ +  K R +++     V    NI   +     +D     T++  ++G+   +V L  + L ++ S    ++ESLV +D++  ++
Sbjct:  954 KTPPPEIIKRGTSSILSY---LRRLSSGKEICKRTKLMLVGLGEAGKTSLMNSLISASNSNKPELTDGIDIKDWVVELPDKTKLTYSIWDFAGQSVYYNSHQFFLSSRAVYFLVWNVRLGS-----------DYAGLDFW-LNSINCHAPGAPIFIIGTHIDEVAKFTLNKEKLKARYNQICGFHFVSNTKNIGINELVKDLLDV----TLKQKYMGESIPSVWLNFENLVKQKS----ASESLVSYDYLSNLA 1184
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BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Match: C3XQ16_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XQ16_BRAFL)

HSP 1 Score: 104 bits (260), Expect = 1.260e-20
Identity = 67/186 (36.02%), Postives = 103/186 (55.38%), Query Frame = 1 
Query:  328 NPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLVGLAEAGKTTIVRHFT--DQPVPKGPDRTVGIEITDWKPLDEVRLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWLEMLHMRVPGAAIALVGSHVDDMRKEGLDPDVAKKRLHEVVRKF 879
            NP  RPP+ V   G+     ++E+++  GE  S  LK+V++G   AGKT++++     D  + +  DRT G+EIT WKP D +  +V  +DF G   Y+ +HQ FLT+ +L LL VDL  +    Q       D +  + +WL+ L+ RVPGA + +V S     + EG   D+ KK  H++  KF
Sbjct:  741 NPLIRPPAEVCSQGMVAVRQYFEELES-GEAVSTHLKVVVLGKELAGKTSLIQTLLSGDSSLTQQEDRTHGVEITQWKPDDNITFEV--YDFGGHDAYHLTHQFFLTQDSLHLLTVDLQTYCCTEQ-------DYKNAVGFWLDTLNARVPGAMVTIVCS-----KSEG-SVDIEKK-THDIEVKF 909
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig858.17617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKS5_ECTSI3.650e-12368.20LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LK68_ECTSI7.640e-5259.26LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI1.390e-3447.40LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE1.410e-3343.26Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE6.970e-3343.68Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE2.150e-3245.20Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE2.920e-3241.45Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLG1_ECTSI4.260e-2942.68LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A813TUL2_9BILA3.470e-2330.31Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
C3XQ16_BRAFL1.260e-2036.02Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig858contigL-elsbetiae_contig858:921..7503 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score197.6
Seed ortholog evalue1e-47
Seed eggNOG ortholog2880.D8LK68
KEGG rclassRC00043,RC00070,RC00090,RC00992,RC02896
KEGG koko:K03800,ko:K16666
KEGG ReactionR07770,R07771,R11143
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
EC6.3.1.20
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size1134
Cds size1131
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig858.17617.1prot_L-elsbetiae_contig858.17617.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig858 921..7502 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816940.2617123-CDS-L-elsbetiae_contig858:920..9691622816940.2617123-CDS-L-elsbetiae_contig858:920..969Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 921..969 +
1691683928.0710192-CDS-L-elsbetiae_contig858:920..9691691683928.0710192-CDS-L-elsbetiae_contig858:920..969Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 921..969 +
1622816940.273718-CDS-L-elsbetiae_contig858:1195..12671622816940.273718-CDS-L-elsbetiae_contig858:1195..1267Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 1196..1267 +
1691683928.082311-CDS-L-elsbetiae_contig858:1195..12671691683928.082311-CDS-L-elsbetiae_contig858:1195..1267Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 1196..1267 +
1622816940.2859218-CDS-L-elsbetiae_contig858:1559..16311622816940.2859218-CDS-L-elsbetiae_contig858:1559..1631Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 1560..1631 +
1691683928.0922775-CDS-L-elsbetiae_contig858:1559..16311691683928.0922775-CDS-L-elsbetiae_contig858:1559..1631Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 1560..1631 +
1622816940.3021276-CDS-L-elsbetiae_contig858:2055..21271622816940.3021276-CDS-L-elsbetiae_contig858:2055..2127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 2056..2127 +
1691683928.1026814-CDS-L-elsbetiae_contig858:2055..21271691683928.1026814-CDS-L-elsbetiae_contig858:2055..2127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 2056..2127 +
1622816940.315446-CDS-L-elsbetiae_contig858:5864..64641622816940.315446-CDS-L-elsbetiae_contig858:5864..6464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 5865..6464 +
1691683928.1142845-CDS-L-elsbetiae_contig858:5864..64641691683928.1142845-CDS-L-elsbetiae_contig858:5864..6464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 5865..6464 +
1622816940.3264515-CDS-L-elsbetiae_contig858:7236..75021622816940.3264515-CDS-L-elsbetiae_contig858:7236..7502Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 7237..7502 +
1691683928.1291628-CDS-L-elsbetiae_contig858:7236..75021691683928.1291628-CDS-L-elsbetiae_contig858:7236..7502Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig858 7237..7502 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig858.17617.1

>prot_L-elsbetiae_contig858.17617.1 ID=prot_L-elsbetiae_contig858.17617.1|Name=mRNA_L-elsbetiae_contig858.17617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=377bp
KLGALQQLFLWGNKLSGSIPPELGSLAALKELYLDNNQLSGSVPKELGSL
SELQKLWLQNNQLTGTIPEELGKLTALKGLWLHDNQLTEFPSEVLELCRG
SLTEPSWGINPWKRPPSTVLESGLERALGWWEDVKRFGEGKSNRLKMVLV
GLAEAGKTTIVRHFTDQPVPKGPDRTVGIEITDWKPLDEVRLQVSVWDFA
GQADYYSSHQLFLTKGALFLLVVDLHAFSKEVQSAVDNFTDPRGRIFWWL
EMLHMRVPGAAIALVGSHVDDMRKEGLDPDVAKKRLHEVVRKFIVDKAAN
ISKGKSSGCMDTESPTTMEADHLGDGAQAVPLGDRLAQRSSFRKISAESL
VLHDHVFGISLYPWSVRVLREWVVKAA
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mRNA from alignment at L-elsbetiae_contig858:921..7503+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig858.17617.1 ID=mRNA_L-elsbetiae_contig858.17617.1|Name=mRNA_L-elsbetiae_contig858.17617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6583bp|location=Sequence derived from alignment at L-elsbetiae_contig858:921..7503+ (Laminarionema elsbetiae ELsaHSoW15)
AAGCTTGGGGCCCTTCAGCAACTGTTTCTATGGGGCAATAAACTGAGCGG
TGAGGTACCTTTCTCAACTGTCTTCATTAATTTCGATTTCGATTTCCATA
GAACGTGTCCTGCCTACGTCATTGCAATTGGTAAGTATGTTGCCTTCCCG
ATCAAACTCAGGAATAAGTCCTGCCAACGCGTGGGTGAGTGGGTGTGTTC
TTGAAGTGCGAATATATAGACCTGTATTTGTTTAATTGTTCTCCCGCCAT
CTTCGTATTTTTATGTTGCTTGCAGGCTCCATCCCCCCGGAACTGGGAAG
CCTCGCAGCACTGAAGGAGCTCTATCTCGACAACAACCAGCTCAGCGGTG
AGTCCCTAGATAAATTACTAGTTTTACCTTGTCTAAAAATAAATGAGAAC
TCACCTGTGAGCTGGTGTTGTTGAGCGTCAGCAACAGGAGCTTTCTGAGG
TTTCCCAGCTCCGCCGGGATGGGGCCTGCAAGCAGAAGCGCACGTTCGAA
AAATGCGGGGAATTCAAAATTAACCACCCGGCTTCTAGAAGGCTACTCAC
CCACGCGTTGGCAGGACCGATATTCTCGAAGTACCATTTTCATCACTCGA
TATTTTCATTGTGGTTTACCGTTGCACTGTTATTTGTAGGCTCAGTACCC
AAGGAGCTGGGAAGCCTCTCCGAGCTGCAGAAGCTTTGGCTGCAAAACAA
CCAGCTTACCGGTAAGAGGTGTGCACTACCATTGTTGCTGTTCTTGTATA
AAGTTGCTCCGCTAGGTTCTCGAACGCTACTAACCCACGCATAAGCAGGA
CACATGTCCTAGAAAGCAAAAAGAAACGTCTAATTTCCGCGCTGCGTATT
TTTTGCGGGACCTATTCCCGGGGCATTGAGATCTCTCATCAAGCTTCAGG
GAGCTGTTACTCTACTCCAACAAGCTAACCGGTAAGGGAGTGTAAACTAG
AGTTTCTTTTTGTTTTTAACAACGTTCTAGAAGGCTACTCGCCAACGGAC
TGAAATTTGATGGGGAAGGCAACACTTGTACCTGATGACTCACCAGTGGG
TGAGTAGGTGTTCTAGAACCCGGGCAGTTTATTTTTTATTCCCCGCTAAA
TTCGTGCGGCATGCGGTTGCTCGCCATCTGCACAGGAACGATACCGGAGG
AGCTAGGGAAGCTGACTGCGCTGAAGGGGCTCTGGCTCCACGACAACCAG
CTTACCGGTGAGAGACGTGTACAAAACTTTGAAATAGAAATATACAGAGT
ACGTGTTTTCAAGCATGTGTCCTGCCAACGCGTAGGCAGGATTCACGCGT
GCAAATTCTACAGTTTTCGAAAGATACACAAAATCGAAGATCGACGACTC
ACCAACCAACTTGTCGGAGCTGAGGTTGAGGGCTCCAAAGCGCTTAGATT
GCCTAGCTGTGGCGGGATGTGCCCTTTAGACAGCAATCAAGGCAACGCAT
GTTTCTGGAATTCCAACGAAACATCTGGGTGTGTCCTAGTGTGCTTCTAT
AACCTACTCACCCACATATTCTGCCATTATGTGACCAACGCCGTCGGCAA
GTCGGCTTCTAGAATGAAGCGGAGCAAATTGTTTTTTGCAGCGCTGCACA
GAAATTGTACTCGCTCGCCTCTCACCTGTAACCGTTGTTGTACAGCCAAA
GCGTCCTCAGCTCCGAGAGGGCTCCGAGCTCGTTGGGTATCGGCCCTACG
AAAATATTTGGGTTTCGGCAAGAAAATTGAATAGAGGTTTGGGGTTTAAC
TGTCAGAAATGTGTCCTGCGTACGCATACACGGGATTCATCCATGGAACC
AAAAAAAGTTGCAAAAGTGGGTACCTGTCAGCTTGTTGATGCTGAGTCGC
AGCACCCGCAGCTCGCTGAGAGCTCCCAGCTGTGATGGGATGGGGCCTGC
AAGCGGAAGGAGGATAGCGGAGTTAGTTAGCAGGGGGACAACAAACACCC
CTGGCTTCTAGAACACCTACTCCACCCACGCGTACACAGGGTTGATCCTA
AACAATGTTACCACGTTAACCGCTCATCACATTGACTCCAAGGTAGAGTT
GCTGCAGTGGTTTAAGATTTCCCAGCTCCGGCGGGGTGGATCCTGCAGCA
GAAGCACAAATGCTGTTTGAGCGGGGAATACATTAAGATTACCTGGCTTG
TAGAACGCACCTACTCACCTACTCACCGTAGGTGCGTTCTAGACCCTGCG
GAGCAACTTTCTTAAACAAAATAGGGCAAGTTAGGATGGTAAAGTCCACG
ATTGAGCGACAGCGAAAGCTCCTCATCTCACTGACAACTCCGACCTACTC
ACCCACGGTGAGCAGGTGCGTTCTAGAACCCTACGGAGCCTCTAAACAAA
TAGGGCAAGTTTGGATGGTAAAGTTCCCGCCTCTTACCGGTAAGCTGATT
GAGGGACAGGGAAAGCTCCTCCAGCTCACTGACAGCTCCCAGCGTCTCGG
GAATCGGTCCTGGACAAGATACCCAACGCGAGTATATCAAGTGAAGGATT
ATTCGTGCTGCAAACTTGTCAACTCGATTCACCTGCAAACTGATTCCAGC
CCAGGTTTAATATGCGTGAGTTTGGTAAGGGGACCCAGCTCCTTGGGGAC
GGAACCTGCGAGCAGCATTCGAAAATTGGCGATCCATAATCTGTTTATTC
GCATGTTGCTTTCTTCGGAATTTGAAAAAAACATCGCTGGTCGTTTGAAG
TCAGCAGCTATAACTTGTTCGTTTGCCCTCCGACAATTGGAGATAGATAG
ATTCAAAATACACGCACTACATCACATTTTCTACTTGCGGGAGAACCTGC
GCCAACGATTTCCTTTATATCCCCCCAAAAAAATATTAAATCTTTCTCAA
ACGTGGCGTCTTGGTAGAGGTTGACAAAGCAAATGCGAAAAAAATAATTC
CGAGGCTTTCCGATTGGTGGGCACGTCTGACCAGCTTTCGGGGGTCCCGG
CCTCGGGACCCCCAGAATCCGGTACAGAACACCTGTTTGGCAAAAAAAAA
ACTCCTTCGCTCCAGAGTCCCACATTGATCATTCGTACCAAGTTTGGTTG
GGTACCTCAAAAGATTGACGCAGCAGGGTCGTTTGACGTGAAAAAAACGT
GAAAAACGTCCAAACTATACTTAAATCAAGTAAACAGGGGGTACGCAGAC
TTTTTCGTGCTACAGCGCACGTTTTCGAATTTCCTCACGCCGTTTGGGCG
AGTTAGACCACGAATTTTTGCACACATGTTCTGGAAGGCATTACCTAAAA
CTCGAAGTATTTATTTTTTTGGTTTTGGTTTTGTTAGCTATTTATCCATG
GTCGCGGTGGACCAACTTGACCGGGGGGGCGGGGCGGATCCCGGCCATCT
CGACAACAAAACCAAAAATTTTAAAATACACATCCTTTGAGTTTCAGGTA
ATGTCTCCAAGAGTATGTGTGCAAAATTTCGTGGTCTAACTCGGAAAAAC
GGCGTGAGGAATCGCCGGCGACTAAATTTTGGGCTTTCAGCCCGAACCAG
CTTGTATCCAAAAAACAAAGGAGATGGTGGGCGGGATGGTCTTGTATCCT
CTGCCTTTTTTTGTATCCGCTTGTAGAGAGGCACTTGCGGGGGAGACTTA
AAGGAAGACCCGAGGAGTCAGTGTGCCAGTCGTTGGGGGCTCCGCGGTTT
GAACTAGTTCCGTGCCGGAACGTGTTCCATCTCATGGGCCCCGGTGTTTG
TTGTATTCCGCAGATTCCGTGGGAAATCAAAGATGTTCCGTAGGTTTCAC
GAGGGAAAGCGACGTTTTTTTGGAATATCGCAAATTTTCCCTGGGCGGCT
GCAGAGTCTGATCCGCCCCTCTGCTGTCGAGCGTTGCTCTTTGTCATTTA
GGTATAAACAGCCGTGCTGCACTCGCGTCAAGTTCGTTTCTTGACTGGGC
CAAAAACTATGGTGTATGATCATTCACCCGATTTGACCGAAAAATCGTTG
TTCAAAAATATGTTCATGCCCACCAGATCGTCGAAAACGTGGCTCAGCTA
CTTGCTGAGCTGGTATCCAGGACACGCGACGGCTTCTACATACCTTTCAC
CGTTCACTTGAGTAGGCCCTTCAAGCGGCTTGCGCTGTTCTTGCCTGCAG
GGTCGAAATATTTGAACTCCTGAACACCAAGCGGTCAGTTGCACGTGTGC
TTTGGTTTGGTTTTCGGAAGCATAAAGTTGCACCTGCAGAAGCAAGATCG
CCTTCCCGACAGCTTCAAACAAGCGAAGCACGGCGAATCTATATAGGAAT
GCAAACTGGTGCAGATTTCACCAAGAGACCCACCAGCCGCTCTCAAAACG
CTCCACTGCTAGTTCGATCCCTAGCGTGTTACTGATGCCGAGAACTGGGG
GATGCTGTGTGGAAGTTGAACGTTCAAGGTATTTGGTGCCTGGTGACTAT
CGGGGCAGTGCACTTTTTTTGAGAATCTGACTTTTGTCAGAAACTGTTTG
GGAGAGTGCCGTGAGACTTTTGTGCCTAGTGACCCACCGGATGAGCTGGT
TTCCTACAGGGAGAGCTTCTTAAGGGCTACGGGATGTCCCAGCTCCGGTG
AAATGGGGTCGGGTGTGGAAGCAGAGCGAATACGAATTTGCGGGTAAATG
AAAAATCAGGTCCCAGCTTTTAGACACCGACTCACCCTCGCCTAGCGCTA
GCAGTCGCTGTAAAAACATGAGGTAATGCCAAGAGGTGAATAACATACCA
GTGACTTATGATAAACTGAGGCCCCACAGAGACGCAACCAAACCCGGCAC
ATATTAGAGAACGACGGGAGTGGACACGTGACTCGAAGATACTGATGGAT
TATCGACAACGGGGGTAGAGAAAGATGATAAAACTTATATTTGCTGAATC
GGCCCCGTGACGCGGCAATCAGGAGGCAATGCTTTGCGTAGACCTCCTTG
ACCTAAATCTTATATGCATGCCCGCGTTAAATCTGCATGGGCAGAATTCC
CCTCGGAGGTTCTTGAGCTGTGTCGGGGGAGTCTAACAGAGCCATCCTGG
GGAATAAACCCTTGGAAACGGCCGCCGTCGACGGTGCTGGAATCGGGGCT
CGAGAGAGCTCTGGGCTGGTGGGAGGACGTGAAGCGATTTGGCGAAGGCA
AGTCAAATAGGCTCAAGATGGTGCTTGTGGGCCTGGCCGAGGCCGGGAAA
ACCACCATTGTTCGCCACTTCACCGATCAGCCAGTCCCAAAAGGCCCTGA
CCGTACGGTGGGCATCGAGATCACGGATTGGAAGCCGTTGGATGAGGTCC
GCCTGCAGGTCAGCGTCTGGGACTTCGCTGGCCAGGCGGACTACTACTCC
TCCCACCAGCTGTTCCTGACCAAGGGCGCTTTGTTTCTGCTTGTAGTCGA
CCTGCATGCCTTTTCTAAAGAGGTGCAGAGTGCCGTGGACAATTTCACCG
ACCCTCGTGGGCGCATCTTCTGGTGGCTGGAGATGCTCCACATGCGAGTG
CCTGGCGCGGCCATAGCTCTTGTGGGGTCCCACGTAGACGATATGAGGAA
AGAGGGCCTGGATCCCGACGTGGCCAAGAAGCGTCTTCACGAGGGTGAGG
CATTGGGTTTCTTTGGTTCTTTGGAACAGGGCTTGCATCACTTTTTCTAT
GTTGAGGCATGTGCATGTGTTCTGGTTTGCGTGCACGTACCATGACCGGT
TACGAGAGGCGCGAGAAGTCTTCATCGTTCCCGCAAAGCATGCATGGGTG
GATATTGGACAAGCTGTTCACTCTGGAGAAGATGGAGATAGTTTTTGAGC
CTGGCAGCAAAACATCCACGTTTTTTTAGATGAGGTGGAGCAAGAGCCCT
GCGGCACCGCCAGAGAAACGAAAGCAGCGCCAAGGTAGCGGTCATCCTGA
CCTTTCAAAATACCGTTACACACTAAGATCGAGGCCAGGGAGATGGTGCT
CCATTTCAAATTGCGATGGCGCTTAGTGAAAAAGCGAAAAATAGATCAAA
ACCCCGGTTGCACCGCTCGCTGTATAACGGTCGTGTTGTTTGAGTTTTAC
CGAACACCCGCCTACCACGTCATTTTCGCCCGATGAAGACTACAAAACAC
AACGTGACTCTTCCAATTTTTTGGGATTGTGATATTTCTTCTGGGCCGCC
CACTTTAGTTTAACCAAAAAGAGGTCGAGACGGTATTTTCTGTTCAATAA
GTAACTTCTTCTTGAGGCGGGGTACAATGCGTAAAGTTCGAGCGTTGTCT
GGGGTCTAATTTCCATCGCCCACACTCGCTATCTATGGCGGCGAAATACT
CATTCAATGCACCCGCCCCGCTCCCTTATTCGGAATGTCCCCTGGTCTCC
CTGTCCTGATGAGAAGTTGTACGCAAGTTCATTGTGGACAAGGCCGCGAA
CATCTCAAAGGGGAAAAGTAGTGGTTGCATGGACACAGAGTCTCCGACGA
CGATGGAGGCGGACCATCTGGGGGATGGTGCGCAGGCTGTTCCACTTGGC
GATCGTTTGGCCCAGCGGTCTAGTTTCAGGAAAATTTCCGCGGAATCCTT
GGTCCTCCATGACCACGTCTTCGGGATATCCCTTTATCCTTGGAGCGTTC
GCGTACTGCGGGAATGGGTCGTGAAGGCAGCAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig858:921..7503+

>mRNA_L-elsbetiae_contig858.17617.1 ID=mRNA_L-elsbetiae_contig858.17617.1|Name=mRNA_L-elsbetiae_contig858.17617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2262bp|location=Sequence derived from alignment at L-elsbetiae_contig858:921..7503+ (Laminarionema elsbetiae ELsaHSoW15)
AAGCTTGGGGCCCTTCAGCAACTGTTTCTATGGGGCAATAAACTGAGCGA
AGCTTGGGGCCCTTCAGCAACTGTTTCTATGGGGCAATAAACTGAGCGGC
TCCATCCCCCCGGAACTGGGAAGCCTCGCAGCACTGAAGGAGCTCTATCT
CGACAACAACCAGCTCAGCGGCTCCATCCCCCCGGAACTGGGAAGCCTCG
CAGCACTGAAGGAGCTCTATCTCGACAACAACCAGCTCAGCGGCTCAGTA
CCCAAGGAGCTGGGAAGCCTCTCCGAGCTGCAGAAGCTTTGGCTGCAAAA
CAACCAGCTTACCGGCTCAGTACCCAAGGAGCTGGGAAGCCTCTCCGAGC
TGCAGAAGCTTTGGCTGCAAAACAACCAGCTTACCGGAACGATACCGGAG
GAGCTAGGGAAGCTGACTGCGCTGAAGGGGCTCTGGCTCCACGACAACCA
GCTTACCGGAACGATACCGGAGGAGCTAGGGAAGCTGACTGCGCTGAAGG
GGCTCTGGCTCCACGACAACCAGCTTACCGAATTCCCCTCGGAGGTTCTT
GAGCTGTGTCGGGGGAGTCTAACAGAGCCATCCTGGGGAATAAACCCTTG
GAAACGGCCGCCGTCGACGGTGCTGGAATCGGGGCTCGAGAGAGCTCTGG
GCTGGTGGGAGGACGTGAAGCGATTTGGCGAAGGCAAGTCAAATAGGCTC
AAGATGGTGCTTGTGGGCCTGGCCGAGGCCGGGAAAACCACCATTGTTCG
CCACTTCACCGATCAGCCAGTCCCAAAAGGCCCTGACCGTACGGTGGGCA
TCGAGATCACGGATTGGAAGCCGTTGGATGAGGTCCGCCTGCAGGTCAGC
GTCTGGGACTTCGCTGGCCAGGCGGACTACTACTCCTCCCACCAGCTGTT
CCTGACCAAGGGCGCTTTGTTTCTGCTTGTAGTCGACCTGCATGCCTTTT
CTAAAGAGGTGCAGAGTGCCGTGGACAATTTCACCGACCCTCGTGGGCGC
ATCTTCTGGTGGCTGGAGATGCTCCACATGCGAGTGCCTGGCGCGGCCAT
AGCTCTTGTGGGGTCCCACGTAGACGATATGAGGAAAGAGGGCCTGGATC
CCGACGTGGCCAAGAAGCGTCTTCACGAGGAATTCCCCTCGGAGGTTCTT
GAGCTGTGTCGGGGGAGTCTAACAGAGCCATCCTGGGGAATAAACCCTTG
GAAACGGCCGCCGTCGACGGTGCTGGAATCGGGGCTCGAGAGAGCTCTGG
GCTGGTGGGAGGACGTGAAGCGATTTGGCGAAGGCAAGTCAAATAGGCTC
AAGATGGTGCTTGTGGGCCTGGCCGAGGCCGGGAAAACCACCATTGTTCG
CCACTTCACCGATCAGCCAGTCCCAAAAGGCCCTGACCGTACGGTGGGCA
TCGAGATCACGGATTGGAAGCCGTTGGATGAGGTCCGCCTGCAGGTCAGC
GTCTGGGACTTCGCTGGCCAGGCGGACTACTACTCCTCCCACCAGCTGTT
CCTGACCAAGGGCGCTTTGTTTCTGCTTGTAGTCGACCTGCATGCCTTTT
CTAAAGAGGTGCAGAGTGCCGTGGACAATTTCACCGACCCTCGTGGGCGC
ATCTTCTGGTGGCTGGAGATGCTCCACATGCGAGTGCCTGGCGCGGCCAT
AGCTCTTGTGGGGTCCCACGTAGACGATATGAGGAAAGAGGGCCTGGATC
CCGACGTGGCCAAGAAGCGTCTTCACGAGGTTGTACGCAAGTTCATTGTG
GACAAGGCCGCGAACATCTCAAAGGGGAAAAGTAGTGGTTGCATGGACAC
AGAGTCTCCGACGACGATGGAGGCGGACCATCTGGGGGATGGTGCGCAGG
CTGTTCCACTTGGCGATCGTTTGGCCCAGCGGTCTAGTTTCAGGAAAATT
TCCGCGGAATCCTTGGTCCTCCATGACCACGTCTTCGGGATATCCCTTTA
TCCTTGGAGCGTTCGCGTACTGCGGGAATGGGTCGTGAAGGCAGCATTGT
ACGCAAGTTCATTGTGGACAAGGCCGCGAACATCTCAAAGGGGAAAAGTA
GTGGTTGCATGGACACAGAGTCTCCGACGACGATGGAGGCGGACCATCTG
GGGGATGGTGCGCAGGCTGTTCCACTTGGCGATCGTTTGGCCCAGCGGTC
TAGTTTCAGGAAAATTTCCGCGGAATCCTTGGTCCTCCATGACCACGTCT
TCGGGATATCCCTTTATCCTTGGAGCGTTCGCGTACTGCGGGAATGGGTC
GTGAAGGCAGCA
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