mRNA_L-elsbetiae_contig8396.17400.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: D8LER9_ECTSI (Soluble pyridine nucleotide transhydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER9_ECTSI) HSP 1 Score: 374 bits (960), Expect = 4.050e-127 Identity = 198/234 (84.62%), Postives = 217/234 (92.74%), Query Frame = 1
Query: 4 PRRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGRV--NGFFRTSNPRVYAVGDVTGPPGLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLA--AQGEKAESLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSRADEPTRHVVIGVQII 693
PRRLRVDLVLYSGGRDAN+ETLGC AAGVDLARYGRV +G FRTSNPRVYA+GDVTGPPGLASSAQMGGRAVA+YLF DKM++L+Q+MLETST++EDVVDDPFFAAEAESASGAQRTSEQL Q +TA LGSDDS+A A G + ESLFERVAGAPLTLWTIPEISSVGLTEEQA +G++KASQGGS+VTGYAYFKDIARGRLSGGDAAGFLKLV+RAD PTRHVV+GVQII
Sbjct: 165 PRRLRVDLVLYSGGRDANTETLGCDAAGVDLARYGRVKVDGSFRTSNPRVYAIGDVTGPPGLASSAQMGGRAVATYLFNDKMQKLKQFMLETSTEMEDVVDDPFFAAEAESASGAQRTSEQLQQYEQTAMLGSDDSMADAAGGAEGESLFERVAGAPLTLWTIPEISSVGLTEEQAFAEGMRKASQGGSMVTGYAYFKDIARGRLSGGDAAGFLKLVARADGPTRHVVVGVQII 398
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A6H5L0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D3_9PHAE) HSP 1 Score: 369 bits (947), Expect = 4.750e-122 Identity = 195/235 (82.98%), Postives = 216/235 (91.91%), Query Frame = 1
Query: 4 PRRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGR--VNGFFRTSNPRVYAVGDVTGPPGLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAE--SLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSRADEPTRHVVIGVQIIG 696
PRRLRVDLVLYSGGRDANSETLGC AAGVDLARYGR V+G FRTSNPRV+A+GDVTGPPGLASSAQMGGRAVA+YLF DKM++L+Q+MLET T++EDVVDDPFFAAEAESASGAQRTSEQL Q +TA LGSDDS+A +AE SLF+RVAGAPLTLWTIPEISS GLTEEQA+ +G++KASQGGS+VTGYAYFKDIARGRLSGGDAAGFLKLV+RAD PTRHVV+GVQIIG
Sbjct: 339 PRRLRVDLVLYSGGRDANSETLGCDAAGVDLARYGRIKVDGSFRTSNPRVHAIGDVTGPPGLASSAQMGGRAVATYLFNDKMQKLKQFMLETCTEMEDVVDDPFFAAEAESASGAQRTSEQLQQYEQTAMLGSDDSMADAAGRAEGESLFKRVAGAPLTLWTIPEISSAGLTEEQAVAEGMRKASQGGSMVTGYAYFKDIARGRLSGGDAAGFLKLVARADGPTRHVVVGVQIIG 573
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A836CA28_9STRA (Soluble pyridine nucleotide transhydogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA28_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.810e-52 Identity = 123/246 (50.00%), Postives = 156/246 (63.41%), Query Frame = 1
Query: 4 PRRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGRV--NGFFRTSNPRVYAVGDVTGPPGLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAE------SLFERVA--GAPLTLWTIPEISSVGLTEEQAIDQGLKKASQGG-----SLVTGYAYFKDIARGRLSGGDAAGFLKLVSRADEPTRHVVIGVQIIG 696
P+RLRVD+VLYSGGRDANSE L C AAG+++ R+GRV + T+N VYAVGDV G GLAS+A GR VA LF D+M R + +L T+ LED +DDPFFA+ A A RT+E + + AA+ E +LF A G PLTLWTIPEI+ VGL+EE A + + GG ++V GYAYFKD+ARGRLSG D GFLK+++RA+ P RHVV+GV I+G
Sbjct: 157 PKRLRVDMVLYSGGRDANSEGLLCEAAGIEIGRFGRVMVDDTGCTANKDVYAVGDVVGA-GLASAAAQQGRGVADRLFLDQMLRRARALLNTAAPLEDAIDDPFFASAAP-APPPPRTAE-APESXXXXXXXXXXAAAAEKPDGEGDGTGRTLFGTAARAGTPLTLWTIPEIACVGLSEEAARELEVAGRLGGGGGGDATVVVGYAYFKDLARGRLSG-DPEGFLKIIARAEAPARHVVVGVHIMG 398
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A4D9CSA5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA5_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.850e-45 Identity = 110/252 (43.65%), Postives = 149/252 (59.13%), Query Frame = 1
Query: 7 RRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGR--VNGFFRTSNPRVYAVGDVTGPPGLASSAQMGGRAVASYLFKDKME------------RLRQYMLETSTDLEDVVD-DPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAESLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKAS---QGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSRAD----EPTRHVVIGVQIIG 696
R+L V LVLYSGGRDANSE +GC GV++ +YGR V+ FRT NPRV+A+GDV GPPGLAS AQ R V LF+++ E + R M + LED D FFAA +A ++ E++ +L +R+ APLTLWT+PEI+S G++ E+A+ +G + A QGG +V GYA+FKD+ARGRLSG D GFLK+++RA+ + RH +IGV I+G
Sbjct: 377 RQLEVGLVLYSGGRDANSEKIGCEEVGVEVGKYGRIVVDKDFRTGNPRVFAIGDVIGPPGLASFAQQSARVVTDLLFREEREGRGRTGGEKGEGKRRGLMGQAEVTLEDWAGGDDFFAAPDANA---------------------EEXXXXXRERSLALLKRME-APLTLWTVPEIASSGMSTEEALARGERLAETEEQGGGIVFGYAFFKDLARGRLSG-DLNGFLKIIARAEGGSGQKMRHTIIGVHIVG 605
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: H6WB84_VAULI (Soluble pyridine nucleotide transhydogenase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB84_VAULI) HSP 1 Score: 147 bits (372), Expect = 1.900e-38 Identity = 98/235 (41.70%), Postives = 135/235 (57.45%), Query Frame = 1
Query: 4 PRRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGR--VNGFFRTSNPRVYAVGDVTGPPGLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAESLFERVAGA--PLTLWTIPEISSVGLTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSRADEPTRHVVIGVQIIG 696
P+ L+VDL++YSGGRDANSE L C A V++ ++GR V+ RT+NP ++A+GDV+G GLAS A GR V+ LF +++ ML ST +EDV+DD FF ++ E+ E+ +LF GA PLTLWT+PE++ VGL+E G G V GYAYFKD+ARGR SG D GFLK+++ D+ +HVV GV ++G
Sbjct: 178 PQTLKVDLLMYSGGRDANSEGLKCEAVNVEIGKFGRIEVDSRCRTTNPDIFAIGDVSGG-GLASIAAQQGRYVSDQLFLNRLVIKANSMLNKSTPMEDVLDDDFFGSQNENVF-------------ESNXXXXXXXXXXXXXSKLALFGTSFGAKVPLTLWTVPEVAGVGLSE------GEIPYESKGKYVIGYAYFKDLARGRFSGEDG-GFLKIIASVDKIGQHVVKGVHVMG 391
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A7S2Y1R6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1R6_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.650e-34 Identity = 97/235 (41.28%), Postives = 124/235 (52.77%), Query Frame = 1
Query: 7 RRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGR--VNGFFRTSNPR-VYAVGDVTGPPGLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAESLFERVAGAPLTLWTIPEISSVG--LTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSRADEPTRHVVIGVQIIG 696
R+ VD VLYSGGRDANSE +GC G+D+A+YGR V+ RT+ P+ +YA+GDV GPPGLASSA GR V + LF D + +L D V D FF ++ L D SL + S + PLTLWTIPEI+SVG L QA +G K G +V G +FKD ARGRLSG + GF+K+ ++ H +IG I G
Sbjct: 324 RKFLVDKVLYSGGRDANSEGIGCEDVGIDIAKYGRISVDDSCRTTAPKSIYAIGDVIGPPGLASSAMQQGREVTNLLFADNVSKLDLKQDSKQEDETFVDTDDFFVEFSQD-------------------LSEDQSLFGKSRNVRSSSD----TPLTLWTIPEIASVGTGLDASQAPQRGAKV----GDIVCGRGFFKDCARGRLSG-EVNGFVKVAAKITSSNTHEIIGCCIFG 530
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A6U8N6N8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8N6N8_9EUGL) HSP 1 Score: 128 bits (322), Expect = 2.010e-30 Identity = 94/238 (39.50%), Postives = 124/238 (52.10%), Query Frame = 1
Query: 7 RRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGR--VNGFFRTSNPRVYAVGDVTGPPGLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAESLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSR------ADEPTRHVVIGVQIIG 696
R + +L+LYSGGRDANSE L A G+ A+YGR VN + T+ P V+AVGDV G GLAS+A GGR V++ LF K E Q L++S F + A SASG Q A PLTLWTIPEI+SVG++ EQ QG GG+++ GYA F ++ARGRL+GG GF+++V+ + H ++GV IIG
Sbjct: 459 RMFKPELILYSGGRDANSEGLNLAECGIKFAKYGRIAVNDNYETNMPGVFAVGDVIGG-GLASAAAQGGRTVSTNLFAPKAE---QAELQSSA--------LFGTSGASSASGGQS----------------------------------ADVPLTLWTIPEIASVGVSVEQLEAQGETGWEDGGNIIVGYARFDELARGRLAGGQ--GFVQIVAMHTPAKDGQKAATHRIVGVHIIG 648
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A7S1U0J3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0J3_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.690e-24 Identity = 83/241 (34.44%), Postives = 110/241 (45.64%), Query Frame = 1
Query: 13 LRVDLVLYSGGRDANSETLGCAAAGVDLARYGRV--NGFFRTSNPRVYAVGDVTGPP------GLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAESLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVS-----RADEPTRHVVIGVQIIG 696
LR+DL+LYSGGRDANS +G AAAGV++ +YGRV + RT+ +YA+GDV PP GLAS+A GR VA LF + +A AP TLWT+PEIS+VGLT E A +A+ G +V G A+++D ARGRLSG GF++LV+ HV++G I+G
Sbjct: 243 LRIDLLLYSGGRDANSGEMGLAAAGVEIGKYGRVVVDQLLRTTCDGIYAIGDVIQPPTKDFPAGLASAAVQHGRLVADQLFCPGYNK-----------------------------------------------------------------ELASAPTTLWTLPEISTVGLTPEAA------EATYPGRVVCGTAFYRDAARGRLSGDGDEGFVRLVAVWQPGAGVRRGEHVLVGAGILG 412
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: A0A7R9U251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U251_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.710e-23 Identity = 81/219 (36.99%), Postives = 103/219 (47.03%), Query Frame = 1
Query: 13 LRVDLVLYSGGRDANSETLGCAAAGVDLARYGR--VNGFFRTSNPRVYAVGDVTGPP------GLASSAQMGGRAVASYLFKDKMERLRQYMLETSTDLEDVVDDPFFAAEAESASGAQRTSEQLLQEAETASLGSDDSLAAQGEKAESLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKASQGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVS 645
LRVDLVLYSGGRDAN++ +G A GV L +YGR V+ RT+ VYA+GDV PP GLAS+A GR VA LF+ + E ++ AP TLWT+PEIS+VGL+ EQA ++ GG +V G AY++D ARGRLSG GFL+LV+
Sbjct: 374 LRVDLVLYSGGRDANTDGMGLEALGVRLGKYGRIVVDRKLRTTCQNVYAIGDVIEPPSKDFPNGLASAAVQHGRLVAEQLFQKAFD-----------------------------------------------------------------EELSSAPTTLWTMPEISTVGLSPEQA-----EEMYPGGRVVQGTAYYRDSARGRLSGDADDGFLQLVA 522
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Match: K8Z8R3_NANGC (Soluble pyridine nucleotide transhydrogenase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z8R3_NANGC) HSP 1 Score: 92.0 bits (227), Expect = 2.920e-19 Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 391 GSDDSLAAQGEKAE-----------SLFERVAGAPLTLWTIPEISSVGLTEEQAIDQGLKKAS---QGGSLVTGYAYFKDIARGRLSGGDAAGFLKLVSRAD----EPTRHVVIGVQIIG 696
G DD AA AE +L +R+ APLTLWT+PEI+S G++ E+A+ +G + A QGG +V GYA+FKD+ARGRLSG D GFLK+++RA+ + RH +IGV I+G
Sbjct: 13 GGDDFFAAPDANAEEXXXXXXXXSLALLKRME-APLTLWTVPEIASSGMSTEEALARGERLAETEEQGGGIVFGYAFFKDLARGRLSG-DLNGFLKIIARAEGGSGQKMRHTIIGVHIVG 130 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8396.17400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8396.17400.1 >prot_L-elsbetiae_contig8396.17400.1 ID=prot_L-elsbetiae_contig8396.17400.1|Name=mRNA_L-elsbetiae_contig8396.17400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp QPRRLRVDLVLYSGGRDANSETLGCAAAGVDLARYGRVNGFFRTSNPRVYback to top mRNA from alignment at L-elsbetiae_contig8396:5771..8214+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8396.17400.1 ID=mRNA_L-elsbetiae_contig8396.17400.1|Name=mRNA_L-elsbetiae_contig8396.17400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2444bp|location=Sequence derived from alignment at L-elsbetiae_contig8396:5771..8214+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8396:5771..8214+ >mRNA_L-elsbetiae_contig8396.17400.1 ID=mRNA_L-elsbetiae_contig8396.17400.1|Name=mRNA_L-elsbetiae_contig8396.17400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig8396:5771..8214+ (Laminarionema elsbetiae ELsaHSoW15)back to top |