mRNA_L-elsbetiae_contig8326.17329.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A6H5KG72_9PHAE (S1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG72_9PHAE) HSP 1 Score: 221 bits (562), Expect = 7.140e-71 Identity = 127/180 (70.56%), Postives = 138/180 (76.67%), Query Frame = 1 Query: 1 MRNPVLWLLGIVILSNEGEAFVGVPARSPALVARPLA---ERCCTSLSTNSTPWAMPVARFVRAHDNCQATRRPVSVARVATSTALLAKKKRGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 531 MRN +LWLLG+ LS+ GEAFVGVP R+ ALVAR A E CCTSL T+S F HD + RRP ++ R A ++ALLAK NEGA+PRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK Sbjct: 1 MRN-ILWLLGVAALSSMGEAFVGVPVRATALVARGRASQQESCCTSLVTHSIH-----RTFAVDHDGQETARRPANMGRAAATSALLAKXXXXXXX-XNEGAKPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 173
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: D7G916_ECTSI (S1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G916_ECTSI) HSP 1 Score: 171 bits (434), Expect = 5.110e-52 Identity = 98/131 (74.81%), Postives = 102/131 (77.86%), Query Frame = 1 Query: 220 VARVATSTALLAKKKRGRGGGNNEGAQPRERKEKDDVIE---------------------------VEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 531 +ARVA ++ALLAKKK GRGGGNNEGA+PRERKEKDDVIE VEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK Sbjct: 1 MARVAATSALLAKKK-GRGGGNNEGAKPRERKEKDDVIEPDSIFTSHAEKDCSAKACRMLVLLSQKVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 130
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A835YXL6_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL6_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.670e-45 Identity = 76/97 (78.35%), Postives = 87/97 (89.69%), Query Frame = 1 Query: 241 TALLAKKKRGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 531 T ++ +KK+GRGG N EGA PRE+K KDDVIEVEGVVKE LPSAMFRVE+ T +++LCTISG+IRKNFVRILVGDPV+VELSPYDLTRGRITFRYK Sbjct: 48 TTIMHQKKKGRGGQNTEGATPREKKVKDDVIEVEGVVKESLPSAMFRVEISPTNQIILCTISGKIRKNFVRILVGDPVKVELSPYDLTRGRITFRYK 144
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A7S4EBF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBF0_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.030e-31 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 1 Query: 304 RERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 525 RERK KDD IEV+GVV E LPSA FRVE+GAT +V+LCTISG+IRKNFV+ILVGD V+VELSPYDLTRGRITFR Sbjct: 54 RERKVKDDKIEVDGVVTEALPSANFRVEIGATKQVLLCTISGKIRKNFVKILVGDSVKVELSPYDLTRGRITFR 127
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A6U1NIU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NIU1_9STRA) HSP 1 Score: 119 bits (297), Expect = 7.040e-31 Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 319 KDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 531 K+DVIEVEGVVKE LP+AMFRVE+ A V+LCTISG+IRKNFV++LVGD VRVELSPYDLTRGRITFRY+ Sbjct: 90 KEDVIEVEGVVKESLPNAMFRVELEANQNVILCTISGKIRKNFVKVLVGDSVRVELSPYDLTRGRITFRYR 160
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A7R9YY09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY09_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.720e-27 Identity = 66/107 (61.68%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 214 VSVARVATSTALLAKKKRGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 525 V V A TAL KK G + RE+K+KDDVIEVEGVV E LP+AMFR + GA T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFR Sbjct: 47 VDVRFAAPKTALFGKKAARAQGNERKNKTVREKKKKDDVIEVEGVVLESLPNAMFRCAIDGAPDTQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 153
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A7S2A1G4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1G4_TRICV) HSP 1 Score: 109 bits (272), Expect = 3.340e-27 Identity = 64/102 (62.75%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 229 VATSTALLAKKKRGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 525 V T TAL KK G + R +K+KDDVIEVEGVV E LP+AMFR + GA T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFR Sbjct: 51 VLTDTALFGKKAARAQGNERKNRTERVKKQKDDVIEVEGVVLESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 152
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A7S4K9U1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9U1_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.860e-27 Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 211 PVSVARVATSTALLAKKKRGRGGGNNEGAQP-RERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 525 PV V+ VA +L KK R GN +P RE+K KDDVIEVEG V E LP+AMFR + GA T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFR Sbjct: 46 PVHVS-VAVPNTILFGKKAARAQGNERKNRPVREKKVKDDVIEVEGTVLESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDTVTIELSPYDLTRGRITFR 153
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A1Z5KC21_FISSO (Translation initiation factor IF-1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC21_FISSO) HSP 1 Score: 107 bits (266), Expect = 1.180e-26 Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 223 ARVATSTALLAKKKRGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 531 A + S+A+ KK+ G + R RK KDDVIEVE VV EGLP+AMFR + GA + + +L TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFRY+ Sbjct: 20 ATLRQSSAIYGKKEARAQGNERKNKTERVRKTKDDVIEVEAVVVEGLPNAMFRCAIDGAPESQEPILATISGKIRKNFVKILVGDKVLIELSPYDLTRGRITFRYR 125
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Match: A0A6U4EV19_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4EV19_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.590e-26 Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 223 ARVATSTALLAKKKRGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 525 A V + TAL KK G + R RK+KDDVIEVEG V E LP+AMFR + GA T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFR Sbjct: 48 ATVPSKTALFGKKAARAQGNERKNKTERVRKKKDDVIEVEGTVIESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDSVTIELSPYDLTRGRITFR 151 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8326.17329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8326.17329.1 >prot_L-elsbetiae_contig8326.17329.1 ID=prot_L-elsbetiae_contig8326.17329.1|Name=mRNA_L-elsbetiae_contig8326.17329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp MRNPVLWLLGIVILSNEGEAFVGVPARSPALVARPLAERCCTSLSTNSTPback to top mRNA from alignment at L-elsbetiae_contig8326:4511..6142- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8326.17329.1 ID=mRNA_L-elsbetiae_contig8326.17329.1|Name=mRNA_L-elsbetiae_contig8326.17329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1632bp|location=Sequence derived from alignment at L-elsbetiae_contig8326:4511..6142- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8326:4511..6142- >mRNA_L-elsbetiae_contig8326.17329.1 ID=mRNA_L-elsbetiae_contig8326.17329.1|Name=mRNA_L-elsbetiae_contig8326.17329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig8326:4511..6142- (Laminarionema elsbetiae ELsaHSoW15)back to top |