mRNA_L-elsbetiae_contig8044.17033.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 4.030e-19 Identity = 65/151 (43.05%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 105 PKILMMLLAIQGEDKRRHWATCS-AQGAPMLFWSAGYVSLAATHLLLAAGADEAISIR-GKHASCHIGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKAAGAGVDGKSSDMLPPGQNPNAILGVRVFRPR-KRFCMLRFVRYAS 548 P+IL MLL ++GE KR WA G P L +A SL A +LL AGADE + K ASC +G+ LP N +A V R+L+RGPAFRARSWAW A + G M + A L VR+FRP +F RF RY Sbjct: 273 PRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSM----KGGRATLDVRIFRPTGNQFFSARFSRYCK 419
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 5.820e-18 Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 3 Query: 108 KILMMLLAIQGEDKRRHWATCSAQGAPMLFWSAGYVSLAATHLLLAAGADEAI-SIRGKHASCHIGSDLPDGALNSARA-AGVARMLQRGPAFRARSWAWPALKAAGAGVDGKSSDMLPPGQNPNAILGVRVFRPR-KRFCMLRFVRYAS 548 KIL ML++ +GE+ RR WA C + L +A +VS+ A H+LL+AGA E + + GK AS +G L A S R A V RMLQRGPA+RARS+ WP L G +G S L GV++FRP RF RF RYA+ Sbjct: 255 KILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLD----GGNGTSDVTLSSRTRGANSFGVQIFRPTGTRFFATRFARYAN 400
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 8.230e-18 Identity = 65/150 (43.33%), Postives = 83/150 (55.33%), Query Frame = 3 Query: 108 KILMMLLAIQGEDKRRHWATCSAQGAPMLFWSAGYVSLAATHLLLAAGADEAISIR-GKHASCHIGSDLPDGALNSARA-AGVARMLQRGPAFRARSWAWPALKAAGAGVDGKSSDMLPPGQNPNAILGVRVFRPR-KRFCMLRFVRYAS 548 KIL ML++ +GED RR WA C + L +A +VS+ H+LL+AGA E + R GK A +G L A S R A V RMLQRGPA+RARS+ WP L G +G S L GV+++RP RF RF RYA+ Sbjct: 310 KILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLD----GGNGTSDVALSSRTRGAKSFGVQIYRPTGTRFFATRFARYAN 455
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 1.070e-14 Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 108 KILMMLLAIQGEDKRRHWATCS-AQGAPMLFWSAGYVSLAATHLLLAAGADEAISIRGKHASCH-IGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKAAGAGVDGKSSDML 455 +IL +LLA +G++++ HWA G P+++ +A Y LA +LLAAGADE + +A+ IG LP G L+ AA + R LQRGPA+RARSWAWP + A D ++ L Sbjct: 271 RILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWPVGEDAPVAGDAGAAGAL 388
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 1.810e-13 Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 111 ILMMLLAIQGEDKRRHWATCSAQGAPMLFWSAGYVSLAATHLLLAAGADE-AISIRGKHASCHIGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKAA 419 I+ MLL+ +G ++ HWA C + P+L + + +++AT +LLAAGADE A + G+ A +G + P + A+ + RML+RGPA+RARSWAWPA A Sbjct: 381 IVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPATARA 484
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.310e-13 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 111 ILMMLLAIQGEDKRRHWATCSAQGAPMLFWSAGYVSLAATHLLLAAGADE-AISIRGKHASCHIGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKAA 419 I+ MLL+ +G ++ HWA C + P+L + + +++AT +LLAAGADE A + G+ A +G + P + A+ + RML RGPA+RARSWAWPA A Sbjct: 389 IVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPATARA 492
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D8LMB2_ECTSI (Ankyrin repeat-containing protein 10_01 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB2_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 1.360e-11 Identity = 55/141 (39.01%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 111 ILMMLLAIQGEDKRRHWATCSAQGA---------------------PMLFWSAGYVSLAATHLLLAAGAD-EAISIRGKHASCHIGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKAAGAG---VDGKSSDMLP 458 IL MLL ++G +K+ WA A P+L ++A Y S+ A +LL+AGAD E ++GK A HIGS LPD N + A V +MLQ+GPAFR RS AWP A G V SS+ +P Sbjct: 151 ILEMLLNVEGGEKQEVWANQHVYFAHDGSLLRGVPGPTMATKFEWLPILHYAAKYCSIPALRILLSAGADTETCDLKGKLAVDHIGSLLPDDKRNGSMEAAVQQMLQKGPAFRVRSRAWPDTTATHGGASKVTQSSSNPVP 291
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 9.240e-7 Identity = 46/120 (38.33%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 108 KILMMLLAIQGEDKRRHWATCS-AQGAPMLFWSAGYVSLAATHLLLAAGADE-AISIRGKHASCHIGS-DLPDGALNS------------ARAAGVARMLQRGPAFRARSWAWPALKAAG 422 KIL M+L I GE+ WA +L +S GY+ A+ LLAAGA+E A G+ IG+ DL + L+ + A + R ++R PAFRARSWAWPA + AG Sbjct: 232 KILRMMLNITGEENAARWADSDWGLAGSLLHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPAFEWAG 351
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D8LME8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME8_ECTSI) HSP 1 Score: 55.1 bits (131), Expect = 1.180e-5 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 108 KILMMLL-AIQGEDKRRHWATCSAQGAPMLFWSAGYVSLAATHLLLAAGADEAISI-RGKHASCHIGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKA 416 +IL MLL A+ + P+L +A + ATH+LLAAGADE RG+ A IG +PD + + A + RMLQ+G FR+RS AWP +A Sbjct: 60 RILKMLLTAVHAGESDGPGVAEVVNSGPLLRLAALHGHPGATHVLLAAGADETRETDRGERARDLIGIFVPDCERDPEKEAAIGRMLQQGAVFRSRSLAWPTERA 164
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI) HSP 1 Score: 55.8 bits (133), Expect = 3.340e-5 Identity = 51/159 (32.08%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 111 ILMMLLAIQGEDKRRHWAT----CS-----------------------AQGAPMLFWSAGYVSLAATHLLLAAGADEA-ISIRGKHASCHIGSDLPDGALNSARAAGVARMLQRGPAFRARSWAWPALKAAGAGVDGKSSDMLPPGQNPNAILGVRVFR 503 +L +LL ++G++K+ WA CS A G P+L +A Y ++ A +LL+AGA +GK A IG + N + A V +L +GPAFRARSWAWPA A G + S L P P +G + F+ Sbjct: 283 MLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAIGVYHHE--RNGSVEAAVRALLLKGPAFRARSWAWPATMNAALG---RPSRNLHPSSVPKTPMGWQTFQ 436 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8044.17033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8044.17033.1 >prot_L-elsbetiae_contig8044.17033.1 ID=prot_L-elsbetiae_contig8044.17033.1|Name=mRNA_L-elsbetiae_contig8044.17033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp MMLLAIQGEDKRRHWATCSAQGAPMLFWSAGYVSLAATHLLLAAGADEAIback to top mRNA from alignment at L-elsbetiae_contig8044:6568..7719- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8044.17033.1 ID=mRNA_L-elsbetiae_contig8044.17033.1|Name=mRNA_L-elsbetiae_contig8044.17033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1152bp|location=Sequence derived from alignment at L-elsbetiae_contig8044:6568..7719- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8044:6568..7719- >mRNA_L-elsbetiae_contig8044.17033.1 ID=mRNA_L-elsbetiae_contig8044.17033.1|Name=mRNA_L-elsbetiae_contig8044.17033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig8044:6568..7719- (Laminarionema elsbetiae ELsaHSoW15)back to top |