mRNA_L-elsbetiae_contig8044.17032.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 152 bits (385), Expect = 1.510e-37 Identity = 105/276 (38.04%), Postives = 147/276 (53.26%), Query Frame = 1 Query: 67 NVRVVEKLLSAGSVSPNAADELDRTPLLMASIFFRETQRFAMVKSLLKAGADATLADNHGILP--LHLASAIGDTGVMEMLLAAAPSTLNMGDVYGASALCYVARKGQNGVVSLLFSAGARDETILSKTGVGCLEIAVGKCAEEGGHEDMVRLILRQGLQAVGGDAVVAKVLVLMAENAQARLMLALLDIEGEDKRQKWARC-DWEGMPILHCAALYGCVAAARVLLSNGADETAENPSGMRASDVIGLDSPAERRNDATEAALSRVLQQGPAFRA 885 N+ + LL AG+ PN AD TPL+M + + + + + LH+A+ ++ +LL+ APST+N+ + G +ALCY A +G VS L SAGARD L G+G L IAV E GHE +VR++L +G+QAVGG+ ++ L R++ LLD+EGE KR KWAR +G P LH AA + AA +LL GADE N AS +G PA ++N T AA+ R+L++GPAFRA Sbjct: 99 NLDALRLLLLAGA-DPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAV-----ELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRA 368
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 134 bits (338), Expect = 7.470e-32 Identity = 85/227 (37.44%), Postives = 120/227 (52.86%), Query Frame = 1 Query: 88 LLSAGSVSPNAADELDRTPLLMASIFFRETQRFAMVKSLLKAGADATLADNHGILPLHLASAIGDTGVMEMLLAAAPSTLNMGDVYGASALCYVARKGQNGVVSLLFSAGARDETILSKTGVGCLEIAVGKCAEEGGHEDMVRLILRQGLQAVGGDAVVAKVLVLMAENAQARLMLALLDIEGEDKRQKWARCDWEGMPILHCAALYGCVAAARVLLSNGADETAEN 768 LL AG+ PNAAD TPL+ A F R+ +V+ LL+ GAD ++G++ LH AS DT V+ +LL A +TLN YG + LC A G V L S GA D + SK G L VG E G +++VR++L G+ AVGG V K + A+++ LL + GE+ R++WA + +LHCA G ++ +LS GADE A + Sbjct: 101 LLDAGA-DPNAADATGHTPLMQACRLFGAADRYVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASAL---VGAVQE--GRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADERARD 321
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.150e-29 Identity = 97/274 (35.40%), Postives = 145/274 (52.92%), Query Frame = 1 Query: 67 NVRVVEKLLSAGSVSPNAADELDRTPLLMASIFFRETQRFAMVKSLLKAGADATLADNHGILPLHLASAIGDTGVMEMLLAAAPSTLNMGDVYGASALCYVARKGQNGVVSLLFSAGARDETILSKTGVGCLEIAVGKCAEEGGHEDMVRLILRQGLQAVGGDAVVAKVLVLMAENAQARLMLALLDIEGEDKRQKWARCDWEGMPILHCAALYGCVAAARVLLSNGADETAENPSGMRASDVIGLD-SPAERRNDATEAALSRVLQQGPAFRA 885 N + LL AG+ N+ D TPL++ ++ +T + + L K GA + + G+ +H+A+ +G+ VM ++L PS LN+ D G + + A +GQ V L SAGA D GV A+ A +GGH MVR++L G+ VGG + + + + QA+++ L+ EGE+ R+KWA C LH AA + V A VLLS GA ET N G AS+ +G+ P RR+ EAA+ R+LQ+GPA+RA Sbjct: 87 NPTALSVLLEAGA-DFNSRDGAGETPLMLTAL--ADTGAL-LARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD------LGVDEQNAAI-LWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRA 349
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.690e-28 Identity = 95/267 (35.58%), Postives = 141/267 (52.81%), Query Frame = 1 Query: 88 LLSAGSVSPNAADELDRTPLLMASIFFRETQRFAMVKSLLKAGADATLADNHGILPLHLASAIGDTGVMEMLLAAAPSTLNMGDVYGASALCYVARKGQNGVVSLLFSAGARDETILSKTGVGCLEIAVGKCAEEGGHEDMVRLILRQGLQAVGGDAVVAKVLVLMAENAQARLMLALLDIEGEDKRQKWARCDWEGMPILHCAALYGCVAAARVLLSNGADETAENPSGMRASDVIGLD-SPAERRNDATEAALSRVLQQGPAFRA 885 LL AG+ N+ D TPL++ ++ +T + + L K GA + + G+ +H+A+ +G+ VM ++L PS LN+ D G + + A +GQ V L SAGA D GV A+ A +GGH MVR++L G+ VGG + + + + QA+++ L+ EGED R+KWA C LH AA + V VLLS GA ET N G A + +G+ P RR+ EAA+ R+LQ+GPA+RA Sbjct: 149 LLEAGA-DFNSRDGAGETPLMLTAL--ADTGAL-LARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD------LGVDEQNAAIF-WACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRA 404
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Match: A0L850_MAGMM (Ankyrin repeat-like protein n=1 Tax=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) TaxID=156889 RepID=A0L850_MAGMM) HSP 1 Score: 60.8 bits (146), Expect = 5.210e-6 Identity = 77/274 (28.10%), Postives = 110/274 (40.15%), Query Frame = 1 Query: 43 LRLEVMRGNVRVVEKLLSAGSVSPNAADELDRTPLLMASIFFRETQRFAMVKSLLKAGADATLADNHGILPLHLASAIGDTGVMEMLLAAAPSTLNMGDVYGASALCYVARKGQNGVVSLLFSAGARDETILSKTGVGCLEIAVGK----CAEE-------------------------GGHEDMVRLILRQGLQAVGGDAVVAKVLVLMAENAQARLMLALLDIEGEDKRQKWARCDWEGMPILHCAALYGCVAAARVLLSNGADETAENPSG 777 L + + E LL +G V +A T L +A + MVK LL GADATLAD G PLH+A+ + E LL + ++ + +AL +G +V LL + GA D T+ + G L +A G CA GH +MV+L+L G A D + L A N + ALL G K AR + + L+ A + G V ++LL+ GAD T + G Sbjct: 656 LHIAAALNKLACAEALLGSGKVELDARGSHSSTALHLAVM----QGHVEMVKLLLAVGADATLADEIGNTPLHVAAFKNELACAEALLGSGKVDVDARAEHILTALNMAVMQGHVEMVKLLLAVGA-DATLADEAGQAPLNVAAGNNELACAAALLIYGKVNVDARAEHSGTALNMAVIQGHVEMVKLLLAVGADATLADEIGNTPLHNAAINNELACAEALL---GSGKGDVDARAE-HILTALNMAVIQGHVEMVKLLLAVGADATLADEFG 920
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Match: UPI00201ECE4D (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform X1 n=5 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201ECE4D) HSP 1 Score: 58.9 bits (141), Expect = 2.250e-5 Identity = 59/227 (25.99%), Postives = 104/227 (45.81%), Query Frame = 1 Query: 64 GNVRVVEKLLSAGSVSPNAADELDRTPLLMASIFFRETQRFAMVKSLLKAGADATLADNHGILPLHLASAIGDTGVMEMLLAAAPSTLNMGDVYGASALCYVARKGQNGVVSLLFSAGARDETILSKTGVGCLEIAVGKCAEEGGHEDMVRLILRQGLQAVGGDAVVAKVLVLMAENAQARLMLALLDIEGEDKRQKWARCDWEGMPILHCAALYGCVAAARVLLSN 744 GNV++VE ++S V N+AD++ RTP+++A + + A+ L+ G D T+ D +G LH A G+ +++ +++ +N D G + + KG V LL D T+ + G L A GG+ ++V I+ + + + + V++AE + + LL +G D K D +G ILH A G V ++S+ Sbjct: 1320 GNVQIVEYIVSHNIVDINSADDVGRTPVMLAVLKGHK----AVFDLLVSKGCDLTVKDTYGDNILHAAWKGGNVEIVKYIVSHNIVDINSADDVGRTPVMLAVLKGHKAVFDLLVRKRC-DLTVQDEDGDNILHAACN-----GGNVEIVEYIVCHNIVDINSAGNMRRTPVMLAELKGHKAVFDLLVSKGCDLTVK----DKDGDNILHRACKRGNVEIVEYIVSH 1532 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8044.17032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8044.17032.1 >prot_L-elsbetiae_contig8044.17032.1 ID=prot_L-elsbetiae_contig8044.17032.1|Name=mRNA_L-elsbetiae_contig8044.17032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MPRRATTTFDDGQLLRLEVMRGNVRVVEKLLSAGSVSPNAADELDRTPLLback to top mRNA from alignment at L-elsbetiae_contig8044:1746..4893+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8044.17032.1 ID=mRNA_L-elsbetiae_contig8044.17032.1|Name=mRNA_L-elsbetiae_contig8044.17032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3148bp|location=Sequence derived from alignment at L-elsbetiae_contig8044:1746..4893+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8044:1746..4893+ >mRNA_L-elsbetiae_contig8044.17032.1 ID=mRNA_L-elsbetiae_contig8044.17032.1|Name=mRNA_L-elsbetiae_contig8044.17032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig8044:1746..4893+ (Laminarionema elsbetiae ELsaHSoW15)back to top |