mRNA_L-elsbetiae_contig804.17030.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig804.17030.1
Unique NamemRNA_L-elsbetiae_contig804.17030.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: A0A482STX6_9ARCH (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482STX6_9ARCH)

HSP 1 Score: 348 bits (893), Expect = 1.190e-117
Identity = 171/202 (84.65%), Postives = 188/202 (93.07%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYIAAFSETLALA IVSK + PLK+AL++EPEDHIKAA AW+LGQIGRHTPDHARA+AEGDVLRHLLACM+H+DSS+DL+TKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDV ARRAFVQ+GGLQFLQELNETVGGKL E+I  IN CYP E+VE+YSPNYSK LL K+DE+QP V
Sbjct:  186 GNNKLPGIMAIGYIAAFSETLALATIVSKAIPPLKEALISEPEDHIKAACAWTLGQIGRHTPDHARAIAEGDVLRHLLACMVHEDSSEDLKTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVAARRAFVQSGGLQFLQELNETVGGKLSEFIIQINNCYPQEVVEFYSPNYSKTLLQKVDEYQPEV 387
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: A0A3R6WK16_9STRA (Uncharacterized protein (Fragment) n=15 Tax=Oomycota TaxID=4762 RepID=A0A3R6WK16_9STRA)

HSP 1 Score: 345 bits (884), Expect = 3.980e-115
Identity = 166/202 (82.18%), Postives = 189/202 (93.56%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYI+AFSETLALA+I +KG+AP+K+ALV+EPEDHIKAASAW+LGQIGRHTPDHARA+AE DVLRHLLACM H +SSDDL+TK+KRALK+ILAKCTHLQALQPLLRD+P+KVQKY+L+QFAQ+LPHD+EARR+FVQNGGLQFLQEL+E  GGKL EYI  IN CYPPEIVEYYSPNYSK LLDK+DEFQP V
Sbjct:  270 GNNKLPGIMAIGYISAFSETLALAIITTKGIAPVKNALVSEPEDHIKAASAWTLGQIGRHTPDHARAIAEADVLRHLLACMTHPNSSDDLKTKAKRALKSILAKCTHLQALQPLLRDAPMKVQKYILKQFAQMLPHDLEARRSFVQNGGLQFLQELSEAAGGKLTEYILEINNCYPPEIVEYYSPNYSKTLLDKLDEFQPQV 471
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: T0QM12_SAPDV (Sperm-associated antigen 6 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QM12_SAPDV)

HSP 1 Score: 346 bits (887), Expect = 4.320e-115
Identity = 166/202 (82.18%), Postives = 190/202 (94.06%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYI+AFSETLALA+I +KG+AP+K+ALV+EPEDHIKAASAW+LGQIGRHTPDHARA+AE DVLRHLLACMIH +SSDDL+TK+KRALK+ILAKCTHLQALQPLLRD+P+KVQKY+L+QFAQ+LPHD+EARR+FVQNGGLQFLQEL+E  GGKL EYI  IN CYPPEIVEYYSPNYSK LLDK+DE+QP V
Sbjct:  307 GNNKLPGIMAIGYISAFSETLALAIITTKGIAPVKNALVSEPEDHIKAASAWTLGQIGRHTPDHARAIAEADVLRHLLACMIHPNSSDDLKTKAKRALKSILAKCTHLQALQPLLRDAPMKVQKYILKQFAQMLPHDLEARRSFVQNGGLQFLQELSEAAGGKLTEYIMEINNCYPPEIVEYYSPNYSKTLLDKLDEYQPQV 508
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: D7G791_ECTSI (Putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G791_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.400e-113
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 
Query:  100 LKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA 609
            LKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA
Sbjct:  340 LKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA 509
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: A0A7S2G6F1_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2G6F1_9STRA)

HSP 1 Score: 338 bits (868), Expect = 4.440e-112
Identity = 170/199 (85.43%), Postives = 186/199 (93.47%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQ 597
            GN KLPGIMAVGYIAAFSETLALA+IVSKGV PLKDALV+EPEDHIKAASAWSLGQIGRH+PDHARALAE DVLRHLLACM+H DSS+DL+TKSKRALKAILAKCTHLQALQPLLR++PVKVQKYVL+QFA +LP DVEARRAFVQNGGLQFLQELNETVGGKLEE+I  IN CYP EIV++YSP+YSK LL+KI + Q
Sbjct:  320 GNTKLPGIMAVGYIAAFSETLALAIIVSKGVTPLKDALVSEPEDHIKAASAWSLGQIGRHSPDHARALAENDVLRHLLACMVHVDSSEDLKTKSKRALKAILAKCTHLQALQPLLREAPVKVQKYVLKQFASILPKDVEARRAFVQNGGLQFLQELNETVGGKLEEFITQINNCYPEEIVQFYSPHYSKELLEKITDAQ 518
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: H3G9L6_PHYRM (Uncharacterized protein n=44 Tax=Oomycota TaxID=4762 RepID=H3G9L6_PHYRM)

HSP 1 Score: 335 bits (859), Expect = 7.330e-111
Identity = 161/202 (79.70%), Postives = 186/202 (92.08%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMV 606
            GN KLPGIMA+GYI+AFSETLALAVI SKG+ P+K A+V+EPEDHIKAASAW+LGQIGRHTPDH+RA+AE DVLRHLLACMIH +SSDDLR KSKRALK+ILAKCTHLQALQPLLRD+P+KVQKY+L+QFAQ+LPHD+EARR+FVQNGGL+ LQ+L+E  GGKL EYI  IN CYPPEIVEYYSP+YSK LLDK+D++QP V
Sbjct:  307 GNNKLPGIMAIGYISAFSETLALAVITSKGITPVKSAMVSEPEDHIKAASAWTLGQIGRHTPDHSRAVAEADVLRHLLACMIHPNSSDDLRIKSKRALKSILAKCTHLQALQPLLRDAPLKVQKYILKQFAQMLPHDLEARRSFVQNGGLELLQQLSEAAGGKLTEYILEINNCYPPEIVEYYSPHYSKTLLDKLDDYQPQV 508
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: A0A835ZF63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF63_9STRA)

HSP 1 Score: 321 bits (823), Expect = 2.230e-105
Identity = 160/199 (80.40%), Postives = 178/199 (89.45%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQ 597
            G A+LPG+MA+GY+AAFSETLALAVIV++ V PLK+ALVAE EDHIKAA  W+LGQ+GRHTPDHARALAEGDVLRH+LA M H DSS+DLR K+KRALKA+LAKCTHL ALQPLLRD+P K QKYVLRQFA LLPHDV+ARRAFVQ+GGLQ+LQEL E   GKLEEYI AIN CYPPE+VEYYSPNYSK LLDKIDEFQ
Sbjct:  307 GAARLPGVMALGYVAAFSETLALAVIVARAVQPLKEALVAEGEDHIKAACVWTLGQMGRHTPDHARALAEGDVLRHMLAAMSHPDSSEDLRLKAKRALKAVLAKCTHLAALQPLLRDAPPKAQKYVLRQFATLLPHDVDARRAFVQSGGLQYLQELAEGGAGKLEEYISAINACYPPEVVEYYSPNYSKTLLDKIDEFQ 505
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: F0YN79_AURAN (Uncharacterized protein n=5 Tax=Pelagomonadales TaxID=54409 RepID=F0YN79_AURAN)

HSP 1 Score: 301 bits (771), Expect = 1.330e-97
Identity = 152/167 (91.02%), Postives = 162/167 (97.01%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEY 501
            GNAKLPGIMAVGYIAAFSETLALA+IVSKGVAPLK+ALV EPEDHIKAASAWSLGQIGRHT DHARALAEGDVLRHLLACM+H DSS+DL+TKSKRALKAILAKCTHLQALQPLLR++PVKVQKYVL+QFA +LPHDVEARRAFVQNGGLQFLQELNETVGGKL E+
Sbjct:  307 GNAKLPGIMAVGYIAAFSETLALAIIVSKGVAPLKEALVTEPEDHIKAASAWSLGQIGRHTSDHARALAEGDVLRHLLACMVHQDSSEDLKTKSKRALKAILAKCTHLQALQPLLREAPVKVQKYVLKQFASILPHDVEARRAFVQNGGLQFLQELNETVGGKLTEF 473
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: A0A7S3WLK5_9SPIT (Hypothetical protein n=2 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WLK5_9SPIT)

HSP 1 Score: 274 bits (701), Expect = 4.680e-91
Identity = 133/200 (66.50%), Postives = 170/200 (85.00%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQP 600
            GN +LPGIM +GYIAAFSETLALAV+VSKG+ PLKDAL+ EPEDH+KAASAWSLGQIGRH+PDHARALAE DVLR LLA  +H DSS+DL+TK+KR+LK+++ KCT L AL+PLL ++P  + KYV++QFA++LP+D+ AR+ FVQ+GGLQ +QE++   G KL +YI+ IN  YPPEIV+YYSPNY++ L+ K+DEF P
Sbjct:   10 GNNRLPGIMTLGYIAAFSETLALAVVVSKGIPPLKDALINEPEDHLKAASAWSLGQIGRHSPDHARALAEADVLRRLLAVYLHQDSSEDLQTKAKRSLKSVIQKCTTLPALEPLL-EAPPNILKYVVQQFAKVLPNDLNARKNFVQSGGLQKIQEVSAEAGSKLNDYINEINALYPPEIVQYYSPNYAETLIKKMDEFNP 208
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BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Match: A0A812L165_9DINO (Spag6 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812L165_9DINO)

HSP 1 Score: 278 bits (711), Expect = 1.330e-88
Identity = 134/200 (67.00%), Postives = 171/200 (85.50%), Query Frame = 1 
Query:    1 GNAKLPGIMAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIGRHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHLQALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNETVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQP 600
            GN +LPGIM +GY+AAFSETLALAV+VSKGV PLKDAL++EPEDH+KAA+AWSLGQIGRH+PDHARALAE DVLR +LA  +H DSS+DL+ K+KRALK+I+ KCTHL AL+PL+ DSP  + KYV++QFA++LP+D++ARRAFVQ+G LQ +QE+    G KL+++I +IN  YPPEIV+YYSPNY+  LL K++EF P
Sbjct:  306 GNCRLPGIMTLGYVAAFSETLALAVVVSKGVPPLKDALISEPEDHVKAAAAWSLGQIGRHSPDHARALAEADVLRRMLAVYLHQDSSEDLQIKTKRALKSIIQKCTHLPALEPLI-DSPPNILKYVIQQFAKVLPNDIDARRAFVQSGSLQKVQEVGAETGSKLQDFIDSINMLYPPEIVQYYSPNYADKLLSKMEEFNP 504
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig804.17030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482STX6_9ARCH1.190e-11784.65Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A3R6WK16_9STRA3.980e-11582.18Uncharacterized protein (Fragment) n=15 Tax=Oomyco... [more]
T0QM12_SAPDV4.320e-11582.18Sperm-associated antigen 6 n=2 Tax=Saprolegniaceae... [more]
D7G791_ECTSI1.400e-113100.00Putative n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A7S2G6F1_9STRA4.440e-11285.43Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
H3G9L6_PHYRM7.330e-11179.70Uncharacterized protein n=44 Tax=Oomycota TaxID=47... [more]
A0A835ZF63_9STRA2.230e-10580.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YN79_AURAN1.330e-9791.02Uncharacterized protein n=5 Tax=Pelagomonadales Ta... [more]
A0A7S3WLK5_9SPIT4.680e-9166.50Hypothetical protein n=2 Tax=Strombidinopsis acumi... [more]
A0A812L165_9DINO1.330e-8867.00Spag6 protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig804contigL-elsbetiae_contig804:25100..27808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.4
Seed ortholog evalue3.6e-92
Seed eggNOG ortholog2880.D7G791
Preferred nameSPAG6
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001578,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0019953,GO:0021591,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0035082,GO:0036126,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0060271,GO:0060322,GO:0070925,GO:0071840,GO:0097014,GO:0097223,GO:0097228,GO:0097722,GO:0097729,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1990716
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-04_003710.1
Exons5
Model size612
Cds size588
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig804.17030.1prot_L-elsbetiae_contig804.17030.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig804 25124..27808 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.1508183-UTR-L-elsbetiae_contig804:25099..251231622816889.1508183-UTR-L-elsbetiae_contig804:25099..25123Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig804 25100..25123 +
1691683889.3737502-UTR-L-elsbetiae_contig804:25099..251231691683889.3737502-UTR-L-elsbetiae_contig804:25099..25123Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig804 25100..25123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816889.1616583-CDS-L-elsbetiae_contig804:25123..252071622816889.1616583-CDS-L-elsbetiae_contig804:25123..25207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 25124..25207 +
1691683889.385989-CDS-L-elsbetiae_contig804:25123..252071691683889.385989-CDS-L-elsbetiae_contig804:25123..25207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 25124..25207 +
1622816889.1732087-CDS-L-elsbetiae_contig804:25852..259781622816889.1732087-CDS-L-elsbetiae_contig804:25852..25978Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 25853..25978 +
1691683889.39685-CDS-L-elsbetiae_contig804:25852..259781691683889.39685-CDS-L-elsbetiae_contig804:25852..25978Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 25853..25978 +
1622816889.1839473-CDS-L-elsbetiae_contig804:26172..262651622816889.1839473-CDS-L-elsbetiae_contig804:26172..26265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 26173..26265 +
1691683889.4142482-CDS-L-elsbetiae_contig804:26172..262651691683889.4142482-CDS-L-elsbetiae_contig804:26172..26265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 26173..26265 +
1622816889.1945639-CDS-L-elsbetiae_contig804:26848..269831622816889.1945639-CDS-L-elsbetiae_contig804:26848..26983Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 26849..26983 +
1691683889.426063-CDS-L-elsbetiae_contig804:26848..269831691683889.426063-CDS-L-elsbetiae_contig804:26848..26983Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 26849..26983 +
1622816889.20537-CDS-L-elsbetiae_contig804:27658..278081622816889.20537-CDS-L-elsbetiae_contig804:27658..27808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 27659..27808 +
1691683889.4414842-CDS-L-elsbetiae_contig804:27658..278081691683889.4414842-CDS-L-elsbetiae_contig804:27658..27808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig804 27659..27808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig804.17030.1

>prot_L-elsbetiae_contig804.17030.1 ID=prot_L-elsbetiae_contig804.17030.1|Name=mRNA_L-elsbetiae_contig804.17030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
MAVGYIAAFSETLALAVIVSKGVAPLKDALVAEPEDHIKAASAWSLGQIG
RHTPDHARALAEGDVLRHLLACMIHDDSSDDLRTKSKRALKAILAKCTHL
QALQPLLRDSPVKVQKYVLRQFAQLLPHDVEARRAFVQNGGLQFLQELNE
TVGGKLEEYIHAINGCYPPEIVEYYSPNYSKVLLDKIDEFQPMVA*
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mRNA from alignment at L-elsbetiae_contig804:25100..27808+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig804.17030.1 ID=mRNA_L-elsbetiae_contig804.17030.1|Name=mRNA_L-elsbetiae_contig804.17030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2709bp|location=Sequence derived from alignment at L-elsbetiae_contig804:25100..27808+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAACGCCAAGCTGCCCGGTATCATGGCTGTGGGGTACATCGCGGCATT
CAGCGAGACTTTGGCGCTGGCTGTTATCGTGTCTAAAGGAGTTGCGCCGC
TCAAGGATGTGAGTGGCGTTGCGGGTGAAAACCAAGCATCAATAGTCTAT
ACGGAACTCTATTTTTTTATACACCGGCGTACGGATTGTCAACCAGTCCG
CCTAAACAACGGAACGTTCGTCGTCGTTTTCTTGGAGTCGTCATCCAGAG
TAGTTGCCCTCTTTGCTTCTGAGGTGTGTCTTACTTCATAGGGTGTACGT
ACACTGGACGCATCGACAACGAGGCGGTGCTGCAAAAACAAGGATTTGTC
ACCCCCCAGGGCCCCCCGCAGCCCTTTCTGCTGTGCTCCGATGTTGTTGT
CGAGTGGATGTAACTCACTCCTTTTGCAAGAAATCAAGAAATAGGGCGCT
TGTCGCCCGTTGTTCGGCAAGGCCCGCCACCCCAACGGTGCAATGGATTG
GAAGATACACTGCAGCCCTTATTCAAGGAAATAGCCCAAGCGGTTTGCAT
GTAACCGTTGACCCGTGCCGTAGAGCCTGTTCTTCCCCCTGTGGTGTGAT
CAAGAGCGAACATCCGGCAGTACCAACGAGTCCTCCCCCTGTCGTTGCCT
GTCCGCTTTCTTCCGGTCGTTGGTGGAGGATGCGCCGATAATGGTAGAAA
AAAGCCACAATTCAGCTATGTATCTATCTGGCGTTTTGCTGCTGATGATG
CAGGCCCTTGTTGCCGAGCCCGAGGATCACATTAAGGCGGCGTCGGCATG
GTCCCTGGGCCAGATCGGAAGACACACGCCAGATCACGCACGTGCCTTGG
CGGAGGGCGACGTCTTGAGACACCTTCTTGTAAGAAATACGTCATTATAC
CGTTATCTATATGCACAGTCGAAGAAGCCGGCAAAACCGAAAGAAGCAGC
AACCACACTACACTGCGTTCGTCGTGCAGAGGGCATCAGCTGCCCCATCC
AGTGAAATCGGCTCTACTCACTCTCGTTCGTTTCTCTCTTTAACACCCTT
TTTCTCCTCTTCTTAAACCACAGGCGTGCATGATCCACGACGATAGCAGC
GACGACCTGAGGACAAAGAGCAAACGCGCCCTCAAGGCCATCCTCGCCAA
GTGTACCCACCTTCAGGTATACTTCGAAGTATCTAATTACGCCGTAGCCA
AACAGGGCGCAACGCGATACATGCACTGAGGAGCCTGGCAAGGAAGAACT
TGGTCTCCTCTCATGAACCCGCACCCGATACCACCAGCGTTGCCCGCTGC
GGACAGAAAATTCAGTTCAGCAAGGGCGTGCGAATACGAGTTTTGTTTGG
GGGTCCCAAACGGTCACATGGCGGTTTGCTTGCTCTGCTTGGGCCGCGTT
TCGGCCGGCGAACAGGGCCTCATCGAATACCAGGAAAACCTGCCTCCTAA
TTTCGTACAGATTATCTAGTCCGCCCGGCGGATTTGAACCATTCGTTGCT
TCCAACGAATAATGGCTGAGAGCACAGGTGGCTGCCTCGGAATGATGTTC
TTTACTTAATGGCTTTCGGTTGATTGGTACGAGGTATGTGCGATGTCACT
TTCTCCGCAGGGAAAGTCGAACATGTTTGGGTGCCTACCGGCCGTCTACT
GCCGCTGTGGTATACGACAAGGGCCACTGCCAAACGACATTTATCTACAT
AAAAGCTAATACTGCTGCACCTTCATTGCGATGTGTCTGTGCAACACAGG
CGCTGCAGCCGCTGCTGAGGGACAGCCCGGTGAAAGTACAGAAATACGTC
CTCAGGCAGTTCGCGCAGCTACTGCCTCACGACGTTGAGGCGCGCAGAGC
GTTTGTACAGAACGGGGGGCTGCAGTTCCTCCAGGTATGTAGTAGGCTAA
GTACATGTATGGTGCCTTTTCGCCGCCCGATAGCCACCGTTTTGTTTCCA
CCAGCACCAGTTTCGGTCAGGCGTATGGTATGCTTCGAAGAGAAGCCCGG
GGGCGGTATCTGAACACACAGCACTCATCATTCGCTGCACCTTTCTCGCC
GGCCAACAAAGCCTCCAGCAGACACTAAATCACCGAAAGTCCGTGCTCGT
GGCCCGAGGACGTTTGTTCGTGAAGTTTTTTTTTTGCGTGGGTAAATGGA
TTTATCCACCCTCGCGATGGAGACATCCGTCACGTTCCTGGCAGAGATGT
ATCCAAGAGCCGTTGCAGAAAATGTTGGTAGTACAAAGGTGGTCTCTGTT
ATGTTTGCATGCGCGCAAATGCAACAACAATATCTAGTCTATCTATGTTT
AGGTTTGATTAGCAGACTTGTTGCAGGGATGGTGCTCTTTCGGTATGGTT
TTCTACTCAGTCGGATGAATGTTCAGAGTAAATATACATAGTCTTGTTCA
TCACTTACTGTACGTACGACTCATAGAAGTAATTCAGATAATTTACCCTT
GGAGTCTCTACAATAAATGTGGGGAGTTTCCATCATACGAAGTATTTTCA
TATTTTCTATTTTTTCTAACCAGTCTATCCTTGTTTTTATTTCATTTTCA
ACAAAACAGGAATTGAACGAGACGGTAGGGGGCAAGCTGGAGGAGTACAT
CCACGCCATCAATGGGTGCTACCCGCCCGAGATAGTGGAGTACTACAGTC
CGAACTACTCCAAGGTCCTCCTGGACAAAATTGACGAGTTCCAGCCGATG
GTAGCATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig804:25100..27808+

>mRNA_L-elsbetiae_contig804.17030.1 ID=mRNA_L-elsbetiae_contig804.17030.1|Name=mRNA_L-elsbetiae_contig804.17030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig804:25100..27808+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGTGGGGTACATCGCGGCATTCAGCGAGACTTTGGCGCTGGCTGT
TATCGTGTCTAAAGGAGTTGCGCCGCTCAAGGATATGGCTGTGGGGTACA
TCGCGGCATTCAGCGAGACTTTGGCGCTGGCTGTTATCGTGTCTAAAGGA
GTTGCGCCGCTCAAGGATGCCCTTGTTGCCGAGCCCGAGGATCACATTAA
GGCGGCGTCGGCATGGTCCCTGGGCCAGATCGGAAGACACACGCCAGATC
ACGCACGTGCCTTGGCGGAGGGCGACGTCTTGAGACACCTTCTTGCCCTT
GTTGCCGAGCCCGAGGATCACATTAAGGCGGCGTCGGCATGGTCCCTGGG
CCAGATCGGAAGACACACGCCAGATCACGCACGTGCCTTGGCGGAGGGCG
ACGTCTTGAGACACCTTCTTGCGTGCATGATCCACGACGATAGCAGCGAC
GACCTGAGGACAAAGAGCAAACGCGCCCTCAAGGCCATCCTCGCCAAGTG
TACCCACCTTCAGGCGTGCATGATCCACGACGATAGCAGCGACGACCTGA
GGACAAAGAGCAAACGCGCCCTCAAGGCCATCCTCGCCAAGTGTACCCAC
CTTCAGGCGCTGCAGCCGCTGCTGAGGGACAGCCCGGTGAAAGTACAGAA
ATACGTCCTCAGGCAGTTCGCGCAGCTACTGCCTCACGACGTTGAGGCGC
GCAGAGCGTTTGTACAGAACGGGGGGCTGCAGTTCCTCCAGGCGCTGCAG
CCGCTGCTGAGGGACAGCCCGGTGAAAGTACAGAAATACGTCCTCAGGCA
GTTCGCGCAGCTACTGCCTCACGACGTTGAGGCGCGCAGAGCGTTTGTAC
AGAACGGGGGGCTGCAGTTCCTCCAGGAATTGAACGAGACGGTAGGGGGC
AAGCTGGAGGAGTACATCCACGCCATCAATGGGTGCTACCCGCCCGAGAT
AGTGGAGTACTACAGTCCGAACTACTCCAAGGTCCTCCTGGACAAAATTG
ACGAGTTCCAGCCGATGGTAGCATAAGAATTGAACGAGACGGTAGGGGGC
AAGCTGGAGGAGTACATCCACGCCATCAATGGGTGCTACCCGCCCGAGAT
AGTGGAGTACTACAGTCCGAACTACTCCAAGGTCCTCCTGGACAAAATTG
ACGAGTTCCAGCCGATGGTAGCATAA
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