mRNA_L-elsbetiae_contig804.17028.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: D7G790_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G790_ECTSI) HSP 1 Score: 197 bits (502), Expect = 1.840e-60 Identity = 92/106 (86.79%), Postives = 101/106 (95.28%), Query Frame = 2 Query: 314 QELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQKRITNDEFRSCISEELKANSVTA 631 +ELGTRVMYHRPKDPN+FLLE+LGTL++A+GQGTPTTFFT+ DIDAMFSLFDPTGRGHISHEQYENALKTLGIDDP VGAPK KRI+ DEFRSCIS+EL ANSVTA Sbjct: 33 KELGTRVMYHRPKDPNKFLLEVLGTLKSAQGQGTPTTFFTDEDIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPSVGAPKHKRISKDEFRSCISKELLANSVTA 138
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A7S2S3G4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3G4_9STRA) HSP 1 Score: 137 bits (345), Expect = 9.660e-37 Identity = 61/124 (49.19%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 257 DPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQKRITNDEFRSCISEELKANSVT 628 DPR+DAQ Y+E+H IN+LFQELGTR++Y R +DPN FLLE+L ++ PT FFT DI MF +FDPT +G IS EQYE AL ++G++ P+V + +I F CI++E++A S++ Sbjct: 23 DPRKDAQQYMEKHKINELFQELGTRLVYERREDPNAFLLEVLEEIQKNSASSKPTEFFTSEDIITMFEMFDPTNKGEISREQYEQALASIGVETPKVNVMTKMKIDRQTFCRCIADEIRALSLS 146
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A7S2CBI3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBI3_9STRA) HSP 1 Score: 126 bits (317), Expect = 8.650e-33 Identity = 60/127 (47.24%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 254 IDPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQK--RITNDEFRSCISEELKANSVT 628 +DPR+DAQ YI E ++ LFQELGTR+++ RP+DPN FLL +L L+ + P+TFFT D+ +F +FDPTGRG IS QY+ AL ++GI+ P V P ++ F C+ EEL A S+T Sbjct: 3 VDPRKDAQDYIAEKRVDILFQELGTRLVFERPEDPNAFLLSVLEGLKKNRSDKVPSTFFTTEDVMTLFDMFDPTGRGEISAAQYDQALLSMGIESPTVTLPGHATTKVDRATFARCVKEELAALSLT 129
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A835ZCG4_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG4_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.340e-31 Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 314 QELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPK--QKRITNDEFRSCISEELKANSV 625 QEL TRVMYHRP DPN FLLE+L TL TA+ PT FFT DI+A F + DPTG+G +S +QYE AL+ +G++ P V P+ Q+R+ F+ C+ EEL A SV Sbjct: 1 QELCTRVMYHRPSDPNAFLLEVLDTLRTARDSMVPTAFFTAEDIEATFGMMDPTGKGSVSRQQYEQALRNVGVEKPAVALPEGEQERVCRSTFQRCMQEELAAASV 106
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A8K1C250_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C250_PYTOL) HSP 1 Score: 105 bits (263), Expect = 8.540e-25 Identity = 51/127 (40.16%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 251 MIDPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQ-KRITNDEFRSCISEELKANSVT 628 M DP+ AQ Y++ H I +LF LGT +++HRP++P FL + LG ++ AK + FF E D+DAMF FD +G+I+ QYE AL++LGID P + P+ +I + F +++E+K S + Sbjct: 1 MKDPKVRAQLYMDSHGIKELFDGLGTLLLFHRPENPRAFLAQQLGEMQLAKQNQSHVPFFEEQDLDAMFEAFDIKDQGYITPAQYEQALRSLGIDKPTLRLPESVSQINHTLFVRSLTQEIKNASAS 127
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A1V9Z4B1_9STRA (EF-hand domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4B1_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.630e-24 Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 2 Query: 257 DPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQ-KRITNDEFRSCISEELKANS 622 DPRE A+ Y++ + I ++ QEL T +MY RP DP F+++ L + A+ T TFFT+ D+ MF++FD T +G IS QY+ AL++LGID P + P+ R+ + F +++ELK NS Sbjct: 16 DPREKAEKYLKANKIYEILQELCTLMMYIRPADPREFMIQQLNIIRHARENRTSMTFFTDLDLSTMFTMFDTTSQGSISLVQYDQALRSLGIDRPTLRLPESINRVDKNLFVRSMAQELKNNS 138
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: K3WBI5_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBI5_GLOUD) HSP 1 Score: 105 bits (261), Expect = 2.780e-24 Identity = 50/127 (39.37%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 251 MIDPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQ-KRITNDEFRSCISEELKANSVT 628 M DP+ A Y + H I +LF+ +GT +++HRP++P +FL + L ++ AK FF E D++AMF+ FD T RG+I+ EQY+ ALK LGID P + P+ I ++ F +++E+K S + Sbjct: 19 MKDPKVRADLYTQTHGIKELFEGMGTLLLFHRPENPRQFLAQHLAEIQRAKQSQVHVPFFEEHDLEAMFAAFDVTDRGYITPEQYDQALKNLGIDQPTLRLPESVSAINHNLFIRSMTQEIKNASAS 145
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A3F2RDY2_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDY2_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.940e-23 Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 257 DPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQ-KRITNDEFRSCISEELKANSVT 628 DP+ A Y+ H IN+LF+ LGT ++YHRP +P FL + L L AK + TP FF E D+ AMF+ FD +G I+ EQY+ AL+ LGI+ P + P+ IT F +++E+K S + Sbjct: 18 DPKVRAGLYMASHGINELFEGLGTLLLYHRPSNPREFLAQHLQELRRAKQEQTPMPFFNEHDLKAMFAAFDMKEQGTITLEQYDQALRNLGIEKPTMRLPESVASITQALFIRSVTQEIKNASAS 142
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A8J2WMQ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WMQ0_9STRA) HSP 1 Score: 100 bits (249), Expect = 8.680e-23 Identity = 51/126 (40.48%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 257 DPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQKRIT-NDEFRSCISEELKANSVTA 631 DPR +A AY+ H I +LF +LG R+M+ RPKDPN FLLE L ++ +K +G FFT+ DI A F+ DP G I+ +QY +ALK++G++ P+ + + D+F + EL +TA Sbjct: 4 DPRAEANAYLRAHGIKELFADLGARLMFERPKDPNAFLLEELERVQDSKVRG----FFTDTDIAACFAALDPHDTGTITAKQYAHALKSMGVEAPKEPLDEGTEVVAKDDFMERMKRELAPPPLTA 125
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Match: A0A6G0X290_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X290_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.360e-22 Identity = 48/123 (39.02%), Postives = 79/123 (64.23%), Query Frame = 2 Query: 257 DPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAKGQGTPTTFFTEADIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPRVGAPKQ-KRITNDEFRSCISEELKANS 622 DP+E A Y++ + +N++FQEL T +M+ RP + F+++ L + +A+ + +FFTE+D+ AMFS+FD T +G IS QY+ LK+LGID P + P+ R+ F +++EL+ NS Sbjct: 5 DPKEAATQYVQANKLNEVFQELCTLIMHRRPTNLREFIIQQLEIMRSARECRSAPSFFTESDLGAMFSMFDVTNQGSISIAQYDQGLKSLGIDRPTLRLPESIHRVDRPLFVRSLAQELRNNS 127 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig804.17028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig804.17028.1 >prot_L-elsbetiae_contig804.17028.1 ID=prot_L-elsbetiae_contig804.17028.1|Name=mRNA_L-elsbetiae_contig804.17028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp MIDPREDAQAYIEEHSINKLFQELGTRVMYHRPKDPNRFLLELLGTLETAback to top mRNA from alignment at L-elsbetiae_contig804:17617..20177- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig804.17028.1 ID=mRNA_L-elsbetiae_contig804.17028.1|Name=mRNA_L-elsbetiae_contig804.17028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2561bp|location=Sequence derived from alignment at L-elsbetiae_contig804:17617..20177- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig804:17617..20177- >mRNA_L-elsbetiae_contig804.17028.1 ID=mRNA_L-elsbetiae_contig804.17028.1|Name=mRNA_L-elsbetiae_contig804.17028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig804:17617..20177- (Laminarionema elsbetiae ELsaHSoW15)back to top |