mRNA_L-elsbetiae_contig8029.17016.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8029.17016.1
Unique NamemRNA_L-elsbetiae_contig8029.17016.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig8029.17016.1 vs. uniprot
Match: D8LRD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD8_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 4.650e-114
Identity = 197/286 (68.88%), Postives = 222/286 (77.62%), Query Frame = 1 
Query:  640 RRVSVGGDSRXXXXXXXXXXXXXXHLSGPDLASPSGSSTRALSEREQGLLSVFLNTVNEFLPLISRDVVAKLREKLDSDGGTVSRDRKRRRPPSWTGGGGEEADSKRCARGALVEAGLSVGALVTRDWAAAGGFAENARQILKEIFDCPSEEAASAFLCLAYYNTYSGEALRADLYLVQAHSFCLHLAEFPLNLEVCIEHLSHGRLKIDLRPDFHSWGNRRYQVLHVVNHVLSMLVQTGDRGLPAALQANDPSAFEGGEGALLRCVEELVACIRISNQNTLARLIC 1497
            RRVS G  S             XX          +  ++RALS+R+ GLL VFLNTVNEFLPLIS DVVA +R+ +  DG   +  ++RR  P   G GG + D +R AR +L+EA LSVGALVTRD  AA GFAENARQ+LKEIFD PSEEAASAFLCLAY+NTYSGEALRADLYLVQAHSFCL+L EFPLNLE+CIEHLSHGRLKI+LRP+FH+WGNRRY+VLHV NHVLSML QTGDRGLPAALQA DP AFEGGE ALLRCVEELV CIRIS ++TLARLIC
Sbjct:  230 RRVSAGARSGYSSSSDLAGNPAXXXXXXXXXXXXANGTSRALSDRDHGLLGVFLNTVNEFLPLISSDVVAAMRDDIVVDGMNGASKKRRRLSP---GSGGSDTDFERFARSSLIEAALSVGALVTRDRVAAVGFAENARQLLKEIFDVPSEEAASAFLCLAYFNTYSGEALRADLYLVQAHSFCLNLPEFPLNLEICIEHLSHGRLKIELRPNFHTWGNRRYRVLHVANHVLSMLTQTGDRGLPAALQAGDPLAFEGGEAALLRCVEELVTCIRISERDTLARLIC 512
[Close]
BLAST of mRNA_L-elsbetiae_contig8029.17016.1 vs. uniprot
Match: A0A6H5J936_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J936_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 1.850e-110
Identity = 190/252 (75.40%), Postives = 214/252 (84.92%), Query Frame = 1 
Query:  742 SGSSTRALSEREQGLLSVFLNTVNEFLPLISRDVVAKLREKLDSDGGTVSRDRKRRRPPSWTGGGGEEADSKRCARGALVEAGLSVGALVTRDWAAAGGFAENARQILKEIFDCPSEEAASAFLCLAYYNTYSGEALRADLYLVQAHSFCLHLAEFPLNLEVCIEHLSHGRLKIDLRPDFHSWGNRRYQVLHVVNHVLSMLVQTGDRGLPAALQANDPSAFEGGEGALLRCVEELVACIRISNQNTLARLIC 1497
            SG+S R LS+R+ GLL VFLNTVNEFLPLIS DVVA +R+ +  DG   + +++RR  P   G GG + D +R AR +L+EA LSVGALVTRD  AA  FAENARQ+LKEIFD PSEEAASAFLCLAY+NTYSGEALRADLYLVQAHSFCL+L EFPLNLE+CIEHLSHGRLKI+LRP+FH+WGNRRY+VLHV NHVLSML QTGDRGLPAALQA DP AFEGGE ALLRCVEELV CIRIS ++TLARLIC
Sbjct:  462 SGTS-RTLSDRDHGLLGVFLNTVNEFLPLISSDVVAAMRDDIVVDGMNGASNKRRRLSP---GSGGPDTDFERFARSSLIEAALSVGALVTRDQVAAVRFAENARQLLKEIFDVPSEEAASAFLCLAYFNTYSGEALRADLYLVQAHSFCLNLPEFPLNLEICIEHLSHGRLKIELRPNFHTWGNRRYRVLHVANHVLSMLTQTGDRGLPAALQAGDPHAFEGGEAALLRCVEELVTCIRISERDTLARLIC 709
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8029.17016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRD8_ECTSI4.650e-11468.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J936_9PHAE1.850e-11075.40Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8029contigL-elsbetiae_contig8029:1459..8624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-06_002910.1
Exons6
Model size1497
Cds size1497
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8029.17016.1prot_L-elsbetiae_contig8029.17016.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8029 1459..8624 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816888.0072443-CDS-L-elsbetiae_contig8029:1458..19351622816888.0072443-CDS-L-elsbetiae_contig8029:1458..1935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 1459..1935 +
1691683888.5595765-CDS-L-elsbetiae_contig8029:1458..19351691683888.5595765-CDS-L-elsbetiae_contig8029:1458..1935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 1459..1935 +
1622816888.0190024-CDS-L-elsbetiae_contig8029:2097..24231622816888.0190024-CDS-L-elsbetiae_contig8029:2097..2423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 2098..2423 +
1691683888.5707705-CDS-L-elsbetiae_contig8029:2097..24231691683888.5707705-CDS-L-elsbetiae_contig8029:2097..2423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 2098..2423 +
1622816888.0333767-CDS-L-elsbetiae_contig8029:3321..34771622816888.0333767-CDS-L-elsbetiae_contig8029:3321..3477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 3322..3477 +
1691683888.5793939-CDS-L-elsbetiae_contig8029:3321..34771691683888.5793939-CDS-L-elsbetiae_contig8029:3321..3477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 3322..3477 +
1622816888.0470653-CDS-L-elsbetiae_contig8029:4902..51061622816888.0470653-CDS-L-elsbetiae_contig8029:4902..5106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 4903..5106 +
1691683888.588054-CDS-L-elsbetiae_contig8029:4902..51061691683888.588054-CDS-L-elsbetiae_contig8029:4902..5106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 4903..5106 +
1622816888.0609083-CDS-L-elsbetiae_contig8029:6393..65381622816888.0609083-CDS-L-elsbetiae_contig8029:6393..6538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 6394..6538 +
1691683888.5991502-CDS-L-elsbetiae_contig8029:6393..65381691683888.5991502-CDS-L-elsbetiae_contig8029:6393..6538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 6394..6538 +
1622816888.0729406-CDS-L-elsbetiae_contig8029:8435..86241622816888.0729406-CDS-L-elsbetiae_contig8029:8435..8624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 8436..8624 +
1691683888.6087148-CDS-L-elsbetiae_contig8029:8435..86241691683888.6087148-CDS-L-elsbetiae_contig8029:8435..8624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8029 8436..8624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8029.17016.1

>prot_L-elsbetiae_contig8029.17016.1 ID=prot_L-elsbetiae_contig8029.17016.1|Name=mRNA_L-elsbetiae_contig8029.17016.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=499bp
MNILSWPRGGGKRIHGLSDESVAAGGAENNSSGEGGGDAKSAVASSTSSR
AGITTRQGSAGAAGGGGGGGGTRLGRTRAAAAATAATAAATATAITAITA
ATAAAATAPPAERDGPEGVMGTWAGAGLAGLAALDAEFVEGGKMPAAMGS
QGWQDADDGQVGDGGAAGSSEARTPSTGGRAARRGGGSASGSRGSGKRAG
GRGGEGGSAGRGERRVSVGGDSRSGYNGSSGRGGNPGHLSGPDLASPSGS
STRALSEREQGLLSVFLNTVNEFLPLISRDVVAKLREKLDSDGGTVSRDR
KRRRPPSWTGGGGEEADSKRCARGALVEAGLSVGALVTRDWAAAGGFAEN
ARQILKEIFDCPSEEAASAFLCLAYYNTYSGEALRADLYLVQAHSFCLHL
AEFPLNLEVCIEHLSHGRLKIDLRPDFHSWGNRRYQVLHVVNHVLSMLVQ
TGDRGLPAALQANDPSAFEGGEGALLRCVEELVACIRISNQNTLARLIC
back to top

mRNA from alignment at L-elsbetiae_contig8029:1459..8624+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8029.17016.1 ID=mRNA_L-elsbetiae_contig8029.17016.1|Name=mRNA_L-elsbetiae_contig8029.17016.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7166bp|location=Sequence derived from alignment at L-elsbetiae_contig8029:1459..8624+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACATCCTCTCGTGGCCGAGGGGCGGCGGCAAGCGTATTCACGGCCT
TTCCGACGAGTCGGTCGCCGCGGGTGGCGCGGAGAACAACAGCAGCGGCG
AGGGCGGCGGAGACGCGAAGTCCGCCGTCGCTTCTTCGACGTCGTCGCGC
GCCGGCATCACGACGAGGCAGGGGTCGGCCGGCGCGGCCGGTGGTGGCGG
CGGCGGCGGCGGGACGCGGCTTGGAAGGACACGCGCCGCCGCCGCTGCCA
CCGCCGCCACCGCCGCCGCCACCGCCACCGCTATCACCGCTATCACCGCC
GCCACCGCCGCCGCCGCCACCGCCCCTCCCGCAGAAAGGGACGGGCCCGA
GGGCGTGATGGGAACATGGGCAGGCGCGGGACTTGCCGGCTTGGCGGCCC
TGGACGCTGAGTTTGTCGAGGGCGGAAAGATGCCGGCGGCGATGGGGTCG
CAGGGGTGGCAGGACGCCGATGACGGGGTGGTTGAAACTGCGGGCGGGGA
CAACAGCGGCGGCGGTAAGGGTGGGAGCGGGGCCAGCAGCGGCGAGGCCG
GGGCCGGGCGCAGGGACGGCGGTGGTGGTGGCAATCCCAGAGCTGCTCCC
CGGCAGCAAACTCAGAGCGGTGGACGGGGCGGGGGACAGCAAGTAGGCGA
CGGCGGCGCTGCTGGATCCTCCGAAGCACGGACTCCGTCCACCGGCGGCA
GAGCGGCGAGGCGGGGCGGGGGTTCCGCGAGTGGAAGCAGGGGCTCCGGC
AAGCGTGCGGGAGGAAGAGGCGGCGAAGGCGGGAGCGCCGGCAGGGGGGA
GCGCCGCGTGTCGGTGGGAGGGGACTCAAGAAGCGGCTACAACGGTAGCA
GTGGCCGTGGCGGCAACCCAGGGCATCTGTCGGGCCCAGACCTGGCGTCG
CCGTCGGGGAGTTCCACGCGGGCTCTGAGCGAGCGGGAGCAAGGCCTGCT
GAGCGTTTTCTTAAAGTGAGAAACAGAGGGGGACAGGGGGGGGGGGGGGA
GGAGGGGCGGGCTTGTTTAGCGGTCGTTGAGAACAGAGACATAGACGCAG
CCAGCAGCGATGGCGGAAGCAGAGAGCACGACACAACTGAAGTTTTTTTT
TTACAAGGAAGAGAGATGGACAGGGGCCAGGGATCGCTTTGCGGGCGATG
TGTGCAGAGAGAGGACGAAGCAGCAGCCGCGGTACACACGCAATGGTGAT
GGTTACATACAGAGCTCGACTCGGCTTGCCCTCGCTAGGTGTTAGCTTGC
CTGTGGTCAATGACGGAAGCCACGAAGCACTACGAGACAAGACCTTCCGG
CGTGGTACATCTAAATATGCATATTTTAGGGGCACAGGTAGTAAGTTATG
CGGCAACATACGCGTCGCCCGCCCAAACTCCGCGGTTCACACCCCGACAT
GCCACCACACGCGGTCGTGTGCTTATAGGATGCAGATATGTACCCGCGCA
ACCTCGCTCAATCCGGCCCCAGCCGATTTTGTTTTTTTGTTCACATTTAT
TTCTTATTTCCAGTGCTCGATGGGCTCCTTTTGCCACGAGGGCATCTTGC
CAGAGTACTGAACCGTGGTCACACAGAAGGGTTCCTTTCCCGGGCGGATA
GCTCTGCTTGATTACCCTTGGTTGCCGCCCCCCACCCCCCCTTTCTTCCG
TCTCGCCCTCTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCACCATCGCA
CCCTCTCNNNNNNNNNNGGGGGCCTTGTCCCGCCCCTCTTTTTTTTCCCC
CTTGTGGCCCCCCCCCCCCCCCCCTTTTTCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCGATCAAAATCCTATGTGCGTACTTTCGCCTCTCGC
GTGCGCACCCCAGCACGGTCAACGAGTTCCTGCCGCTGATCAGCCGCGAC
GTCGTGGCGAAGCTGCGAGAGAAGCTCGACTCGGACGGAGGGACGGTCTC
CAGAGACAGGAAGCGCCGCCGGCCGCCGTCGTGGACGGGCGGCGGTGGCG
AAGAGGCGGATTCGAAGAGGTGATGCTTTGAGAACAAAAAATCCGTTGAT
CAACAAAGACGGAAAACTAAGCCGCGTTTGAGGTGGGAGGAGGGAACCCC
GTGGGGGGTTCAACTGGTACATACTCCATATACAGTATGTGTGTATGTAT
GTAGTATGTACGTATGTTTTTTTTTTTTTTGTATGAAGTGACGTAATATT
TGTCTGGCCGAATAGAAATACACCTGAAGTGTAAGTACGAAGAGTTCAAG
CATCTCCCCTGCAGAGCTCTGCCAGGCCAAACCAACATGTATATCGGGGA
GAAACCCACCGCCAACCGCGATGTCGTGATGTCGTCATGTTTTGTTGTCG
GCCCGGCGGGTGGACTACTCGTACCCATGTACCGTAGGTGACATAAGATA
AGACACCCCCTGGACCGATATTGAAAGCTTGGTTACTCCGCAACGAATAC
GATTCTAACCACAAACGCCACGTTTTCGGAAAGCTCTCAACGAGATCTTT
CCAACGCCGCCCTGTTCGGGACTGACGCTGCGCTTGCTGTGGAGCACTTG
AGCTTTGAAAATCGGTCCAGGGGGTGTCTTTTCTTATGTCACCTACGGTA
TGACCTGTGTACCCTACCTATACCTGGCGCGTGCGGAGCCTGGGCATTGA
TTGGCCCCTTACTAGTTTCGGATTGATTTCTGAGGAGGTTCTCGAGAGGC
TGGTATTTTCCCATATTTTTCTGCAGGCGGTTGGAGGGTGGTTGTGGACG
AGTATTGTAGACGTGTGGACGATAAATCGATGCCTATCTCCCTTCCAATA
ACCCCTTTTTCGTTTTTGTTTTGGCGCGCCCAGCGTGCGCGCTTACCGCG
GCCACGCTTTGCGATACATACTTTAGGAGAGGCCTCGAGTCTGCTTGTTC
CGTCCAAGCTTTGAGCAACAGCGGTCGGTTGGCTGGAGCAGGTTGGCTGT
GGGCTTACTTTTAACCCTCGAATCGCGCGCCGCTCCTCTTTGGGGACAGG
GGGGGGGAGTGAGCGGATAATAGACCCAGCGGGAAAACCTGCTTTCCAAA
GGATCCATCCAATCCAAAGCGCGGAAACCCACCCCGCTTGCAGATGTTGC
TTGACCGACCGCAAGAACGCGAGCCTCGCCCCCCCACCCCCCCCTACCGG
GCCCCCTGCTGCCGCGCCTGGAGTCACCTTCACTCGATGGAAATGAGGCC
TCCCTCCTCCTCCTCCTCCTCCACACTCCCACTCTCCCACTGCTGTCCTC
TGCACCCACAAAACAAATTATACTACTCCTACTAACTTCCTATCTAACAA
AGCAACCAAACAGTAAGAGCACATTTTATAATCTGATCATTCCGCGACCG
CCGCCCCACCCACCCATCCATCCACACACGCAAAATGAAACCGAACCGAA
ACCAAACCAAACCAAACCAAACCAAACCAAACCGAAAAATGAAGGTGTGC
GCGCGGCGCCCTGGTGGAGGCGGGGCTCAGCGTCGGCGCACTGGTGACGA
GGGACTGGGCGGCGGCCGGCGGGTTCGCCGAGAACGCCCGACAGATCCTC
AAGGAGATCTTCGACTGCCCCAGCGAGGAGGCGGCCAGCGCGTTCCTGTG
CCTGGCCTACTACAACACGTACAGCGGGGAGGCGCTGCGGGCAGACCTGT
GAGTGTCTGTGTCTGTGTCTGTCTCTGTGTGTGTGTGTCTTTGTGTGTGT
GTTGTGTTTTTGTTGTCCTTGCGGATTGTTTTGTTTAATGCCATGCATAA
CCCTAACCAAGATAATAGTGGTGATGTTGGTTGTTCCAGTTTTGTTTGTA
CCTCACATAGCGTGTAGAGTGGAGCGAAGGGCTCCAGACTCGATATCTGT
TATATTATTGCTTTGCTGGCCCTTCGGGTCCATTTTATTTTTCGTGCACC
TTTTCTTAGGTATAAGTTGGCCTGTGACCACGGGAATTGACCGCATCAAG
TGTTGGATTAGTACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACG
GTTTTTAATGCGAAGACAACATACAACAGAACTACTATGTCAAGTCACAG
CCATGCAGTGAGCGAGGTGTGAGGTCGTAGCGGCGGGCGGCGTGTGTATG
TGTGTGTGTGTGTGTGTGCGCGCGCGCGCCAGTACGACCCCCGAACCAAC
CACCACAACAGATAGGTCTGCCATCAGAGTCAGCGGCGCTCGAGCAAACT
ATTTGCAACAATTACAACCAAATGTCACGCGTCAGACGGAGGGAGTGATT
CAATACGTGCCCCCTGCCGTATACATACATACGAGAGCGAAATCCGAGTG
CGAACCCCCCAAGACACGGGGTGGGCGCCCGGGAATCTGCCAACGTTGGC
AGGAGGGAAACACCCTGCCAACAAGCTGTTTGACCGGGTACAGCAACCTA
GAACCTAACCAATGCACACCAACCTAGCCTGGGAGGTTGGGTGAGGGTTG
GGGTTAGGCTTTAGGGTTGGGTTAGGCCTAACTAGGGTGAAGGCTGGAAA
CCCTGCATTCTTCCTTCCGCATGAAAGACGCGGCTACCTCCAAGAACAAT
GTTGTACCGTTTGTTGGAAGGGGGGGTTCCTTTTTGCCAACATAGGCAGG
TTCACGCCCGCCCGACACGGGGCGTTTGCGGGTGGATGGATGCCTGCCTG
GCTCTCGGCGGCTCTCGATTGTCTTCTCTCCTCGCAACGCTCTTTTGCGG
CGCGATATACATGAAAACATCAAAGACGCATCCCCCCCCCTCCTTCTCTC
GGTCGCGATGCTCTCGCGGTGAACGAGCGGCATCAACTATATCGCTTGTT
AAATTTACTTTTTGAATCACGAACAACAGTCGGTAAAAACCAAAAGCATA
AAGACAAACAACCTTTCTTTTCCGCGAACCGTGTTTTTCTCATTTTTTTC
AACAACTTATGTACATTTCATCAAAATATTATCAGCTATCTGGTGCAAGC
GCACAGCTTCTGCCTCCACCTCGCCGAGTTCCCGCTGAACCTGGAGGTGT
GCATAGAGCACCTCAGCCACGGCCGCCTCAAGATAGACCTCAGGCCCGAC
TTCCACTCGTGGGGCAATCGCCGCTATCAGGTGGGTTGGTTCGGGTGTTG
TTGACGAGTGTATGTGTGTGTGTTTTTTCCTCCCGACCTCCCTAGAGTTT
CCATTAGTTGCTGGCAAAGCCCGTGCGTTTGTGTGTGTGTGTGTGTGTGT
GTGTGTTGTGTGTGTTTTTTCCCTCCCATCATTGGCTTATGTATTCGTCG
TCTGCCCCGCTGGCCCCCACCCTCCACTGGCAACTAGCTAGACCACCAAA
CCGGGGTCGCACACAGAGTGTATGTGCTGCCGGTATGTTCGTTTCAGCTG
ACGTGCACTCCGATCCATGTACTCTTAATCAGCAAGTAAGAAGCAAACTA
TGGCTTTTAAACAAGTTTTCTGCCAAAAACATATTAAGTATTTCAACGTC
AGCAGTCGTCTACATTGTACTCCAATGTACCTACATCCTGCCCGCGAAAA
AGGTGTTCCGGGGGCACTGTTGCAGACGCCTCGCATGCCCCCCCCCCCGC
CGCCCACATTTCCGTGCTAGATACTCAGTCAGCGAGCCGTGTAGTTTCTG
ACTTCGAATTTGATGTTGGACGTAAACATTTACGTCGCCAGGGGGGTCGA
TGTCTGTGTACTTGTGGGGGGCAGTTTTGATTGTTTTCCGGGTGAAGGGC
ACGGGGGGAGGAGGGTCGAAGGTCGAGACATCCCACTGCTGCTGTCACTC
GAGGAGACCTTCCCTACGTGCGATAGTGTCGGGTATATGCGTCGTTTTGT
TGTTTGTCCTGTGTACGTACTTGAGTATGATTGGGGGTTACTTTATAGCA
TCTTTTTTATGGTATTGTACCGAAATGTAGCTGATACTTTACTTATTTGT
GTTTTAAAACTTCTTTGTTAAAAATAAACAATGAATCAAAGATGGAACCT
AGCCCACACTAGAGCAAGGACTCAATATGGTGTTCAAACGGTATTCCATA
CAATAGTGACGTAATATTTGGCGAAGCGAGCAGAAAAAAAATTATTTGTT
ACCATACAAAGTGGACCGTAATTAATACACCTTTCTTGATCGTAAATCGC
TGTTTGACAAAAAATGTTTCTAACGATTTTATAACTTGGAAAACAATGGA
CTGACTGCTGTTGTTGTGGCCGTACTGAAAGTTTAGGTCCCTTTGGGTTA
AGATTGCATCTGATGTTTTGATGGACCAGGTGAGAAACTCTCGTAAATAT
GGAAGTACTACGAGAAGAAAAACGTATGGTATTGTTAAAGTGTAGTACCT
CTAAGTACACTGCCAAGGTGTAGCACACGTCTCCACTTGGGGGGACTGTC
GCCACAATAAATGGGAAGGACACACACACACACACACACTGTTGTATTTA
GCGCGCGATCGCGAAACATGCGGTTTTTGGCTGCTGTTTTGTACGTACGA
TGCTGCGGAAGGCATGCGCCTAACTCGATATGTATGTAGGTACGCTGCTT
TTGCTGTGCTGGGCGGGGGCGCTCATAGGTAGTCATCGCTCGCTCGTTAA
AGAGCAGCTGTGCTTTCGTACCTATACGTACACGCTTCTCACGCGGGGTC
GTGCAGCGTGGCCGGTGGTATTTTGCCAGTCCGCGCTTTGCTTGCGGCAG
ATCCCCGAAACACCAGCGTTTCACGCCGATCCGGTCCTCCAACAACTCAC
CCGCCGAGTCCCGGGCCCCCCGACGTTCCCGTCGTACCGGCGGTGTTCGA
GTCCGAAAATGCTCGATTTAAGCCCCCCTCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCACCTCCCCCCCCCCCTGGCCCCTCCC
CCCCCCCCCCCTCCCCGGCCCCCGCCCCCCGTGGCCATTCCCGCCCCCCC
CCCCCCCTTCGGCTGGTGGTGGACCAGGTCCTTCACGTGGTGAACCACGT
GCTGTCGATGCTGGTGCAGACGGGAGACCGCGGCCTGCCCGCGGCCTTGC
AGGCAAACGACCCCTCGGCCTTCGAGGGGGGCGAGGGGGCGTTGCTCCGG
TGCGTGGAGGAGCTCGTGGCGTGCATCAGGATCAGCAACCAGAACACTCT
GGCTCGGCTCATCTGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig8029:1459..8624+

>mRNA_L-elsbetiae_contig8029.17016.1 ID=mRNA_L-elsbetiae_contig8029.17016.1|Name=mRNA_L-elsbetiae_contig8029.17016.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2994bp|location=Sequence derived from alignment at L-elsbetiae_contig8029:1459..8624+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACATCCTCTCGTGGCCGAGGGGCGGCGGCAAGCGTATTCACGGCCT
TTCCGACGAGTCGGTCGCCGCGGGTGGCGCGGAGAACAACAGCAGCGGCG
AGGGCGGCGGAGACGCGAAGTCCGCCGTCGCTTCTTCGACGTCGTCGCGC
GCCGGCATCACGACGAGGCAGGGGTCGGCCGGCGCGGCCGGTGGTGGCGG
CGGCGGCGGCGGGACGCGGCTTGGAAGGACACGCGCCGCCGCCGCTGCCA
CCGCCGCCACCGCCGCCGCCACCGCCACCGCTATCACCGCTATCACCGCC
GCCACCGCCGCCGCCGCCACCGCCCCTCCCGCAGAAAGGGACGGGCCCGA
GGGCGTGATGGGAACATGGGCAGGCGCGGGACTTGCCGGCTTGGCGGCCC
TGGACGCTGAGTTTGTCGAGGGCGGAAAGATGCCGGCGGCGATGGGGTCG
CAGGGGTGGCAGGACGCCGATGACGGGATGAACATCCTCTCGTGGCCGAG
GGGCGGCGGCAAGCGTATTCACGGCCTTTCCGACGAGTCGGTCGCCGCGG
GTGGCGCGGAGAACAACAGCAGCGGCGAGGGCGGCGGAGACGCGAAGTCC
GCCGTCGCTTCTTCGACGTCGTCGCGCGCCGGCATCACGACGAGGCAGGG
GTCGGCCGGCGCGGCCGGTGGTGGCGGCGGCGGCGGCGGGACGCGGCTTG
GAAGGACACGCGCCGCCGCCGCTGCCACCGCCGCCACCGCCGCCGCCACC
GCCACCGCTATCACCGCTATCACCGCCGCCACCGCCGCCGCCGCCACCGC
CCCTCCCGCAGAAAGGGACGGGCCCGAGGGCGTGATGGGAACATGGGCAG
GCGCGGGACTTGCCGGCTTGGCGGCCCTGGACGCTGAGTTTGTCGAGGGC
GGAAAGATGCCGGCGGCGATGGGGTCGCAGGGGTGGCAGGACGCCGATGA
CGGGCAAGTAGGCGACGGCGGCGCTGCTGGATCCTCCGAAGCACGGACTC
CGTCCACCGGCGGCAGAGCGGCGAGGCGGGGCGGGGGTTCCGCGAGTGGA
AGCAGGGGCTCCGGCAAGCGTGCGGGAGGAAGAGGCGGCGAAGGCGGGAG
CGCCGGCAGGGGGGAGCGCCGCGTGTCGGTGGGAGGGGACTCAAGAAGCG
GCTACAACGGTAGCAGTGGCCGTGGCGGCAACCCAGGGCATCTGTCGGGC
CCAGACCTGGCGTCGCCGTCGGGGAGTTCCACGCGGGCTCTGAGCGAGCG
GGAGCAAGGCCTGCTGAGCGTTTTCTTAAACAAGTAGGCGACGGCGGCGC
TGCTGGATCCTCCGAAGCACGGACTCCGTCCACCGGCGGCAGAGCGGCGA
GGCGGGGCGGGGGTTCCGCGAGTGGAAGCAGGGGCTCCGGCAAGCGTGCG
GGAGGAAGAGGCGGCGAAGGCGGGAGCGCCGGCAGGGGGGAGCGCCGCGT
GTCGGTGGGAGGGGACTCAAGAAGCGGCTACAACGGTAGCAGTGGCCGTG
GCGGCAACCCAGGGCATCTGTCGGGCCCAGACCTGGCGTCGCCGTCGGGG
AGTTCCACGCGGGCTCTGAGCGAGCGGGAGCAAGGCCTGCTGAGCGTTTT
CTTAAACACGGTCAACGAGTTCCTGCCGCTGATCAGCCGCGACGTCGTGG
CGAAGCTGCGAGAGAAGCTCGACTCGGACGGAGGGACGGTCTCCAGAGAC
AGGAAGCGCCGCCGGCCGCCGTCGTGGACGGGCGGCGGTGGCGAAGAGGC
GGATTCGAAGAGCACGGTCAACGAGTTCCTGCCGCTGATCAGCCGCGACG
TCGTGGCGAAGCTGCGAGAGAAGCTCGACTCGGACGGAGGGACGGTCTCC
AGAGACAGGAAGCGCCGCCGGCCGCCGTCGTGGACGGGCGGCGGTGGCGA
AGAGGCGGATTCGAAGAGGTGTGCGCGCGGCGCCCTGGTGGAGGCGGGGC
TCAGCGTCGGCGCACTGGTGACGAGGGACTGGGCGGCGGCCGGCGGGTTC
GCCGAGAACGCCCGACAGATCCTCAAGGAGATCTTCGACTGCCCCAGCGA
GGAGGCGGCCAGCGCGTTCCTGTGCCTGGCCTACTACAACACGTACAGCG
GGGAGGCGCTGCGGGCAGACCTGTGTGCGCGCGGCGCCCTGGTGGAGGCG
GGGCTCAGCGTCGGCGCACTGGTGACGAGGGACTGGGCGGCGGCCGGCGG
GTTCGCCGAGAACGCCCGACAGATCCTCAAGGAGATCTTCGACTGCCCCA
GCGAGGAGGCGGCCAGCGCGTTCCTGTGCCTGGCCTACTACAACACGTAC
AGCGGGGAGGCGCTGCGGGCAGACCTCTATCTGGTGCAAGCGCACAGCTT
CTGCCTCCACCTCGCCGAGTTCCCGCTGAACCTGGAGGTGTGCATAGAGC
ACCTCAGCCACGGCCGCCTCAAGATAGACCTCAGGCCCGACTTCCACTCG
TGGGGCAATCGCCGCTATCAGCTATCTGGTGCAAGCGCACAGCTTCTGCC
TCCACCTCGCCGAGTTCCCGCTGAACCTGGAGGTGTGCATAGAGCACCTC
AGCCACGGCCGCCTCAAGATAGACCTCAGGCCCGACTTCCACTCGTGGGG
CAATCGCCGCTATCAGGTCCTTCACGTGGTGAACCACGTGCTGTCGATGC
TGGTGCAGACGGGAGACCGCGGCCTGCCCGCGGCCTTGCAGGCAAACGAC
CCCTCGGCCTTCGAGGGGGGCGAGGGGGCGTTGCTCCGGTGCGTGGAGGA
GCTCGTGGCGTGCATCAGGATCAGCAACCAGAACACTCTGGCTCGGCTCA
TCTGCGTCCTTCACGTGGTGAACCACGTGCTGTCGATGCTGGTGCAGACG
GGAGACCGCGGCCTGCCCGCGGCCTTGCAGGCAAACGACCCCTCGGCCTT
CGAGGGGGGCGAGGGGGCGTTGCTCCGGTGCGTGGAGGAGCTCGTGGCGT
GCATCAGGATCAGCAACCAGAACACTCTGGCTCGGCTCATCTGC
back to top