mRNA_L-elsbetiae_contig8025.17009.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 217 bits (553), Expect = 1.230e-61 Identity = 106/170 (62.35%), Postives = 126/170 (74.12%), Query Frame = 1 Query: 568 LPPVHVTTQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQ-YLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQARAAQNIQHGFAVWNGWF-GEDADPAT--TPFNTACFCSEYTCSDG 1065 L PVHVTT ECTGDT+K + G D+VAYRSL G H V GL E+S YGQ Y F FS+LENKL FES+P RY+PA+GGFC +GIS EV+W D LGP SNP+FWL+ DD+LYLFRSETP+ KF A+ I+HG +W WF G ++ T TPFNTACFCSE TC+DG Sbjct: 94 LAPVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG 263
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 211 bits (537), Expect = 2.410e-59 Identity = 102/170 (60.00%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 568 LPPVHVTTQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQ-YLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQARAAQNIQHGFAVWNGWFG---EDADPATTPFNTACFCSEYTCSDG 1065 L P HVTT ECTGDT+K + G D+VAYRSL G H V GL E+S YGQ Y F FS+LEN+L FES+P +Y+PA+GGFCS+GIS E IW D LGP SNP+ WL+ DD+LYLFRSETP+ KF+ A+ I+HG VW WFG + TPFNTACFCSE +C+DG Sbjct: 94 LAPAHVTTAECTGDTSKPAVKGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLIEDDRLYLFRSETPYDKFKDDKARYIKHGNQVWTEWFGGNPSNEGTVMTPFNTACFCSEESCADG 263
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.170e-45 Identity = 83/166 (50.00%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 574 PVHVTTQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMI--DDQLYLFRSETPFCKFQARAAQNIQHGFAVWNGWFGEDADPATTPFNTACFCSEYTCSDG 1065 P TT +CTGDT V+ GVDVVAY +L G V G S++G Y FYFSS+EN FES+PVRY+PA+GGFCSYG++ E W D LGP +P+ WL++ D +L++FRSE P KF +N++ G A+WNGWF + A P NTAC CSE C +G Sbjct: 98 PTLTTTADCTGDTHLPVLGGVDVVAYWTLPAGSKPVFGTPNLVSLFGDYRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLLAPGENLEAGDAIWNGWFPAERGGAA-PLNTACLCSEEMCVNG 262
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: D7G8M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8M9_ECTSI) HSP 1 Score: 155 bits (391), Expect = 5.270e-39 Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 589 TQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQ-LYLFRSETPFCKFQARAAQNIQHGFAVWNGWFGE---DADPATTPFNTACFCSEYTCSDG 1065 T EC K VM G D+ Y SL +G AV+G++E+ ++Y Y F+F S ENK +FE P Y+P +GGFCS+GISRE WN D LGP ++PN WL+ DD L+ FRSE P KF NI G +W+ W+G+ AD A +P +T CFCS TC D Sbjct: 92 TSEC-ATAAKVVMEGADLTRYFSLELGAAAVYGVEEHEALYNGYKFWFESAENKAMFEESPKSYIPQWGGFCSWGISREDWWNADELGPPADPNQWLITDDGGLHFFRSELPMSKFLGDVPGNIVAGNQIWHSWWGDVEPAADGAGSPLDTDCFCSTETCEDA 253
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.290e-36 Identity = 75/164 (45.73%), Postives = 99/164 (60.37%), Query Frame = 1 Query: 586 TTQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQ-LYLFRSETPFCKFQARAAQNIQHGFAVWNGWFGED----ADPATTPFNTACFCSEYTCSD 1062 TT EC G +T+ V+ G DVV+Y SL G+ A++G +EY Y Y F F+S +NK +FE+ P+ Y+PA+GGFC+YGI+ E W LGP S+PN WL+ DD L +FRSE P F NI G +W GW+GE AD + NTAC C+ C D Sbjct: 71 TTWEC-GTSTEPVLNGADVVSYFSLKEGEAAMYGFEEYPVKYNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFRSEVPKAYFMEDIPGNIATGNRIWTGWWGEGTLPGADDTGSAMNTACLCNIEICLD 233
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.340e-32 Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 577 VHVTTQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQAR-AAQNIQHGFAVWNGWFGEDADPATTPFNTACF 1038 + + C + V+ G DVVAYR L+VG +A G +Y++ YG+Y FYF + EN+ F S P +YVP FGGFCSYGI+ E W +D LGP +N N W++ DD L++F TP KF +R + I+ G +W+ W+ + FNT CF Sbjct: 132 IAAASSSCVDPSAGPVLEGADVVAYRYLNVGANATIGSADYAAKYGEYTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWIIYDDHLFVFMYCTPEHKFVSRNITEEIERGNQIWSTWWND-----VPTFNTGCF 281
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: A0A6H5KGH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH5_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.060e-24 Identity = 66/174 (37.93%), Postives = 86/174 (49.43%), Query Frame = 1 Query: 544 PVLYLYCILPPVHVTTQECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQARAAQNIQHGFAVWNGWFGE-DADPATTPFNTACFCSEYTCSD 1062 P YC + EC G V+ GVDVV Y SL + AV G SV+G Y F+FSS+EN VFE+ A G I+ E +W LGP NP+ W + +L++FRS P +F+ N+ G AVW WFG + A P NTACFC++ C D Sbjct: 18 PASIFYC--------SAECAGQFDLPVLGGVDVVEYWSLPLAAEAVLGSPNLMSVFGNYRFFFSSVENLRVFEARGFSLRSA-GEKIWQRIANEPVWTSTTLGPFGNPSKWGIYGGRLHIFRSSMPKEEFEQDIPGNLDRGNAVWERWFGGMEESLAVPPINTACFCNDRICDD 182
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: D7FW14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW14_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.890e-23 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 760 ESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQARAAQNIQHGFAVWNGWFGE-DADPATTPFNTACFCSEYTCSD 1062 + + ++YVPA+GGFCSYGI+ E +W LGP NP+ W + +L++FRS TP +F+ N+ G AVW GWFG + P NTACFC+++ C D Sbjct: 19 QHDKLKYVPAWGGFCSYGIANESVWTSTTLGPFGNPSKWGIYGGRLHIFRSSTPKEEFEEDIPGNLDRGNAVWEGWFGGMEESLMVPPINTACFCNDHICDD 120
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: A0A7S2W6K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6K5_9STRA) HSP 1 Score: 107 bits (267), Expect = 7.890e-23 Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 595 ECTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQARAAQN-IQHGFAVWNGWFGEDADPATTPFNTACF 1038 ECT + V+ GVDVV Y SLS + AV G + + G+Y F+FS+ NK +FE P +Y+P FGGFC+YGI++ W D+L S+P+ W +ID +LYLF+S + +F A + + G+ W F +T FNT CF Sbjct: 59 ECTSPSLGPVLSGVDVVGYFSLSTDEQAVQGSPDLVARVGKYDFFFSTQRNKALFEVNPRKYMPQFGGFCAYGITKNS-WTADSLDLPSDPDAWRIIDGKLYLFKSSSYLEEFVAGDVETELLGGYKRWGESFY-----STVIFNTDCF 201
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 105 bits (263), Expect = 1.880e-22 Identity = 57/147 (38.78%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 598 CTGDTTKAVMLGVDVVAYRSLSVGQHAVHGLKEYSSVYGQYLFYFSSLENKLVFESEPVRYVPAFGGFCSYGISREVIWNEDNLGPASNPNFWLMIDDQLYLFRSETPFCKFQARAAQNIQHGFAVWNGWFGEDADPATTPFNTACF 1038 C V+ G DVVAY L V G E++SVY + FYFSS EN FES+P +YVPA+GGFC+YG++ E W + + P+ W +ID +L+ F F A I+ G A W+GW E +NT CF Sbjct: 8 CLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWHGWGLEG-------YNTNCF 147 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8025.17009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8025.17009.1 >prot_L-elsbetiae_contig8025.17009.1 ID=prot_L-elsbetiae_contig8025.17009.1|Name=mRNA_L-elsbetiae_contig8025.17009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp MLSRSPALISRPVLYLYCILPPVHVTTQECTGDTTKAVMLGVDVVAYRSLback to top mRNA from alignment at L-elsbetiae_contig8025:2330..5944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8025.17009.1 ID=mRNA_L-elsbetiae_contig8025.17009.1|Name=mRNA_L-elsbetiae_contig8025.17009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3615bp|location=Sequence derived from alignment at L-elsbetiae_contig8025:2330..5944+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8025:2330..5944+ >mRNA_L-elsbetiae_contig8025.17009.1 ID=mRNA_L-elsbetiae_contig8025.17009.1|Name=mRNA_L-elsbetiae_contig8025.17009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1116bp|location=Sequence derived from alignment at L-elsbetiae_contig8025:2330..5944+ (Laminarionema elsbetiae ELsaHSoW15)back to top |